RNA–Protein interactions for RNA: ENST00000261947.4

RNF130-201, Transcript of ring finger protein 130, humanhuman

TSL 1 (best) BASIC

Gene RNF130, Length 1,766 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130-201ENST00000261947 S4R3F8 94 aa13.41□□□□□ -0.26
RNF130-201ENST00000261947 LCA10Q71F78 164 aa13.37□□□□□ -0.27
RNF130-201ENST00000261947 MT1HP80294 61 aa13.35□□□□□ -0.27
RNF130-201ENST00000261947 COA5Q86WW8 74 aa13.34□□□□□ -0.27
RNF130-201ENST00000261947 CHKB-CPT1BH3BT56 60 aa13.29□□□□□ -0.28
RNF130-201ENST00000261947 KRTAP3-3Q9BYR6 98 aa13.29□□□□□ -0.28
RNF130-201ENST00000261947 M0R2T5 61 aa13.2□□□□□ -0.3
RNF130-201ENST00000261947 CSAG1Q6PB30 78 aa13.17□□□□□ -0.3
RNF130-201ENST00000261947 LCE2AQ5TA79 106 aaPredicted RBP13.12□□□□□ -0.31
RNF130-201ENST00000261947 SMIM26A0A096LP01 95 aa13.11□□□□□ -0.31
RNF130-201ENST00000261947 SPTSSBQ8NFR3 76 aa13.11□□□□□ -0.31
RNF130-201ENST00000261947 KRTAP10-6P60371 365 aaPredicted RBP12.92□□□□□ -0.34
RNF130-201ENST00000261947 LORP23490 312 aaPredicted RBP12.86□□□□□ -0.35
RNF130-201ENST00000261947 Q1T7F1 81 aa12.84□□□□□ -0.35
RNF130-201ENST00000261947 H0YAA0 97 aa12.82□□□□□ -0.36
RNF130-201ENST00000261947 KRTAP9-8Q9BYQ0 159 aa12.81□□□□□ -0.36
RNF130-201ENST00000261947 V9GYY9 64 aa12.78□□□□□ -0.36
RNF130-201ENST00000261947 ADM2Q7Z4H4 148 aa12.77□□□□□ -0.36
RNF130-201ENST00000261947 MT2AP02795 61 aa12.72□□□□□ -0.37
RNF130-201ENST00000261947 KRTAP3-2Q9BYR7 98 aa12.71□□□□□ -0.38
RNF130-201ENST00000261947 LINC01558Q9Y6Z2 57 aa12.69□□□□□ -0.38
RNF130-201ENST00000261947 SEC61GP60059 68 aa12.66□□□□□ -0.38
RNF130-201ENST00000261947 P0C880 135 aa12.64□□□□□ -0.39
RNF130-201ENST00000261947 MT1FP04733 61 aa12.64□□□□□ -0.39
RNF130-201ENST00000261947 A0A1B0GU69 56 aa12.63□□□□□ -0.39
RNF130-201ENST00000261947 KRTAP10-10P60014 251 aa12.61□□□□□ -0.39
RNF130-201ENST00000261947 PSPHP1O15172 72 aa12.6□□□□□ -0.39
RNF130-201ENST00000261947 PRR15LQ9BU68 103 aa12.56□□□□□ -0.4
RNF130-201ENST00000261947 Q5VV11 94 aa12.48□□□□□ -0.41
RNF130-201ENST00000261947 CRIPTQ9P021 101 aa12.41□□□□□ -0.42
RNF130-201ENST00000261947 A0A1B0GU33 70 aa12.37□□□□□ -0.43
RNF130-201ENST00000261947 KRTAP9-3Q9BYQ3 159 aa12.35□□□□□ -0.43
RNF130-201ENST00000261947 R4GN34 69 aa12.35□□□□□ -0.43
RNF130-201ENST00000261947 M0QZ58 72 aa12.3□□□□□ -0.44
RNF130-201ENST00000261947 KRTAP19-1Q8IUB9 90 aa12.28□□□□□ -0.44
RNF130-201ENST00000261947 KRTAP13-4Q3LI77 160 aa12.26□□□□□ -0.45
RNF130-201ENST00000261947 SPRR2GQ9BYE4 73 aa12.26□□□□□ -0.45
RNF130-201ENST00000261947 A6NED7 52 aa12.21□□□□□ -0.45
RNF130-201ENST00000261947 SPATA8Q6RVD6 105 aa12.2□□□□□ -0.46
RNF130-201ENST00000261947 BRK1Q8WUW1 75 aa12.18□□□□□ -0.46
RNF130-201ENST00000261947 UQCR11O14957 56 aa12.17□□□□□ -0.46
RNF130-201ENST00000261947 LINC01554Q52M75 96 aa12.1□□□□□ -0.47
RNF130-201ENST00000261947 LCE2BO14633 110 aa12.08□□□□□ -0.48
RNF130-201ENST00000261947 LCE2DQ5TA82 110 aaPredicted RBP12.06□□□□□ -0.48
RNF130-201ENST00000261947 CDC42SE1Q9NRR8 79 aa12.02□□□□□ -0.49
RNF130-201ENST00000261947 KRTAP19-8Q3LI54 63 aa12□□□□□ -0.49
RNF130-201ENST00000261947 MIR22HGQ0VDD5 57 aa12□□□□□ -0.49
RNF130-201ENST00000261947 A0A0D9SG42 100 aa11.99□□□□□ -0.49
RNF130-201ENST00000261947 A8MU10 97 aa11.97□□□□□ -0.49
RNF130-201ENST00000261947 PRO0628Q9UI54 55 aa11.96□□□□□ -0.49
RNF130-201ENST00000261947 MT1BP07438 61 aa11.88□□□□□ -0.51
RNF130-201ENST00000261947 A6NN06 94 aa11.86□□□□□ -0.51
RNF130-201ENST00000261947 USH2AO75445 5202 aa11.82□□□□□ -0.52
RNF130-201ENST00000261947 KRTAP9-2Q9BYQ4 174 aa11.82□□□□□ -0.52
RNF130-201ENST00000261947 KRTAP12-1P59990 96 aa11.77□□□□□ -0.53
RNF130-201ENST00000261947 PLAC4Q8WY50 150 aa11.77□□□□□ -0.53
RNF130-201ENST00000261947 SPINT4Q6UDR6 99 aa11.74□□□□□ -0.53
RNF130-201ENST00000261947 KRTAP12-2P59991 146 aa11.72□□□□□ -0.53
RNF130-201ENST00000261947 FSIP2Q5CZC0 6907 aa11.64□□□□□ -0.55
RNF130-201ENST00000261947 K7ERS5 55 aa11.51□□□□□ -0.57
RNF130-201ENST00000261947 PMAIP1Q13794 54 aa11.51□□□□□ -0.57
RNF130-201ENST00000261947 CAMK2N1Q7Z7J9 78 aa11.51□□□□□ -0.57
RNF130-201ENST00000261947 SSPOA2VEC9 5147 aa11.51□□□□□ -0.57
RNF130-201ENST00000261947 KRTAP19-6Q3LI70 58 aa11.44□□□□□ -0.58
RNF130-201ENST00000261947 MT1XP80297 61 aa11.4□□□□□ -0.58
RNF130-201ENST00000261947 KRTAP10-5P60370 271 aa11.37□□□□□ -0.59
RNF130-201ENST00000261947 CRCT1Q9UGL9 99 aa11.33□□□□□ -0.59
RNF130-201ENST00000261947 PRO2289Q9P1D8 64 aa11.33□□□□□ -0.6
RNF130-201ENST00000261947 SVIPQ8NHG7 77 aa11.18□□□□□ -0.62
RNF130-201ENST00000261947 C10orf95Q9H7T3 257 aa11.16□□□□□ -0.62
RNF130-201ENST00000261947 FCGBPQ9Y6R7 5405 aaPredicted RBP11.11□□□□□ -0.63
RNF130-201ENST00000261947 KTN1-AS1Q86SY8 53 aa11.05□□□□□ -0.64
RNF130-201ENST00000261947 KRTAP9-6A0A140TA67 174 aa11.04□□□□□ -0.64
RNF130-201ENST00000261947 ROMO1P60602 79 aa10.98□□□□□ -0.65
RNF130-201ENST00000261947 KRTAP10-7P60409 375 aaPredicted RBP10.93□□□□□ -0.66
RNF130-201ENST00000261947 TNP1P09430 55 aa10.89□□□□□ -0.67
RNF130-201ENST00000261947 KRTAP10-12P60413 245 aa10.82□□□□□ -0.68
RNF130-201ENST00000261947 KRTAP25-1Q3LHN0 102 aa10.78□□□□□ -0.68
RNF130-201ENST00000261947 PRAC1Q96KF2 57 aa10.76□□□□□ -0.69
RNF130-201ENST00000261947 MACF1Q9UPN3 7388 aaKnown RBP10.65□□□□□ -0.7
RNF130-201ENST00000261947 KMT2DO14686 5537 aa10.63□□□□□ -0.71
RNF130-201ENST00000261947 KRTAP4-8A0A0G2JLE6 195 aa10.62□□□□□ -0.71
RNF130-201ENST00000261947 KRTAP4-8Q9BYQ9 185 aa10.62□□□□□ -0.71
RNF130-201ENST00000261947 LCE3AQ5TA76 89 aa10.51□□□□□ -0.73
RNF130-201ENST00000261947 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.5□□□□□ -0.73
RNF130-201ENST00000261947 KRTAP23-1A1A580 65 aa10.42□□□□□ -0.74
RNF130-201ENST00000261947 KRTAP8-1Q8IUC2 63 aa10.42□□□□□ -0.74
RNF130-201ENST00000261947 SYNE2Q8WXH0 6885 aaKnown RBP10.37□□□□□ -0.75
RNF130-201ENST00000261947 PP632Q6XCG6 107 aa10.31□□□□□ -0.76
RNF130-201ENST00000261947 KRTAP19-5Q3LI72 72 aa10.21□□□□□ -0.78
RNF130-201ENST00000261947 KRTAP19-7Q3SYF9 63 aa10.18□□□□□ -0.78
RNF130-201ENST00000261947 KRTAP5-9P26371 169 aa10.14□□□□□ -0.79
RNF130-201ENST00000261947 KRTAP6-3Q3LI67 103 aa10.14□□□□□ -0.79
RNF130-201ENST00000261947 SPRR2FQ96RM1 72 aa10.12□□□□□ -0.79
RNF130-201ENST00000261947 KRTAP12-3P60328 96 aa10.1□□□□□ -0.79
RNF130-201ENST00000261947 KRTAP9-7A8MTY7 169 aa10.06□□□□□ -0.8
RNF130-201ENST00000261947 MT1EP04732 61 aa10.01□□□□□ -0.81
RNF130-201ENST00000261947 MUC12Q9UKN1 5478 aa9.94□□□□□ -0.82
RNF130-201ENST00000261947 KRTAP15-1Q3LI76 137 aa9.79□□□□□ -0.84
RNF130-201ENST00000261947 MT1LQ93083 61 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms