RNA–Protein interactions for RNA: ENST00000261884.7

TRIP4-201, Transcript of thyroid hormone receptor interactor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIP4, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-201ENST00000261884 SPATA8Q6RVD6 105 aa10.28□□□□□ -0.76
TRIP4-201ENST00000261884 HERC1Q15751 4861 aa10.25□□□□□ -0.77
TRIP4-201ENST00000261884 IGKV2D-30A0A075B6S6 120 aa10.24□□□□□ -0.77
TRIP4-201ENST00000261884 C20orf166-AS1Q96NR2 134 aa10.23□□□□□ -0.77
TRIP4-201ENST00000261884 A8MUU9 505 aa10.19□□□□□ -0.78
TRIP4-201ENST00000261884 XP32Q5T750 250 aa10.19□□□□□ -0.78
TRIP4-201ENST00000261884 UQCR11O14957 56 aa10.16□□□□□ -0.78
TRIP4-201ENST00000261884 MIR22HGQ0VDD5 57 aa10.16□□□□□ -0.78
TRIP4-201ENST00000261884 LPAP08519 4548 aa10.14□□□□□ -0.79
TRIP4-201ENST00000261884 RPL37P61927 97 aaKnown RBP10.11□□□□□ -0.79
TRIP4-201ENST00000261884 PRAC1Q96KF2 57 aa10.09□□□□□ -0.79
TRIP4-201ENST00000261884 HMCN2Q8NDA2 5059 aa10.09□□□□□ -0.79
TRIP4-201ENST00000261884 LRP2P98164 4655 aa10.08□□□□□ -0.8
TRIP4-201ENST00000261884 ADM2Q7Z4H4 148 aa10.07□□□□□ -0.8
TRIP4-201ENST00000261884 SEC61BP60468 96 aaKnown RBP9.93□□□□□ -0.82
TRIP4-201ENST00000261884 KRTAP3-1Q9BYR8 98 aa9.88□□□□□ -0.83
TRIP4-201ENST00000261884 H0YAA0 97 aa9.84□□□□□ -0.83
TRIP4-201ENST00000261884 LINC01554Q52M75 96 aa9.83□□□□□ -0.84
TRIP4-201ENST00000261884 MUC17Q685J3 4493 aa9.81□□□□□ -0.84
TRIP4-201ENST00000261884 CSAG1Q6PB30 78 aa9.78□□□□□ -0.84
TRIP4-201ENST00000261884 A0A1B0GU33 70 aa9.72□□□□□ -0.85
TRIP4-201ENST00000261884 H1FX-AS1Q4G0G2 97 aa9.71□□□□□ -0.86
TRIP4-201ENST00000261884 UBR4Q5T4S7 5183 aa9.7□□□□□ -0.86
TRIP4-201ENST00000261884 MUC2Q02817 5179 aa9.64□□□□□ -0.87
TRIP4-201ENST00000261884 COX6B2Q6YFQ2 88 aa9.64□□□□□ -0.87
TRIP4-201ENST00000261884 KRTAP4-1Q9BYQ7 146 aa9.64□□□□□ -0.87
TRIP4-201ENST00000261884 KRTAP25-1Q3LHN0 102 aa9.53□□□□□ -0.88
TRIP4-201ENST00000261884 RNF213Q63HN8 5207 aa9.5□□□□□ -0.89
TRIP4-201ENST00000261884 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
TRIP4-201ENST00000261884 KRTAP10-6P60371 365 aaPredicted RBP9.43□□□□□ -0.9
TRIP4-201ENST00000261884 K7ERS5 55 aa9.39□□□□□ -0.91
TRIP4-201ENST00000261884 KRTAP19-2Q3LHN2 52 aa9.37□□□□□ -0.91
TRIP4-201ENST00000261884 KRTAP3-2Q9BYR7 98 aa9.36□□□□□ -0.91
TRIP4-201ENST00000261884 KRTAP13-4Q3LI77 160 aa9.34□□□□□ -0.91
TRIP4-201ENST00000261884 ROMO1P60602 79 aa9.29□□□□□ -0.92
TRIP4-201ENST00000261884 S4R3F8 94 aa9.27□□□□□ -0.93
TRIP4-201ENST00000261884 FAT4Q6V0I7 4981 aa9.26□□□□□ -0.93
TRIP4-201ENST00000261884 CRIPTQ9P021 101 aa9.26□□□□□ -0.93
TRIP4-201ENST00000261884 LCE2CQ5TA81 110 aa9.23□□□□□ -0.93
TRIP4-201ENST00000261884 FLGP20930 4061 aaPredicted RBP9.22□□□□□ -0.93
TRIP4-201ENST00000261884 A0A0D9SG42 100 aa9.18□□□□□ -0.94
TRIP4-201ENST00000261884 P0C880 135 aa9.17□□□□□ -0.94
TRIP4-201ENST00000261884 H3BS24 57 aa9.12□□□□□ -0.95
TRIP4-201ENST00000261884 MT1HP80294 61 aa9.08□□□□□ -0.96
TRIP4-201ENST00000261884 KRTAP12-2P59991 146 aa9.04□□□□□ -0.96
TRIP4-201ENST00000261884 M0R2T5 61 aa9.01□□□□□ -0.97
TRIP4-201ENST00000261884 KRTAP12-1P59990 96 aa8.98□□□□□ -0.97
TRIP4-201ENST00000261884 C10orf95Q9H7T3 257 aa8.95□□□□□ -0.98
TRIP4-201ENST00000261884 M0QZ58 72 aa8.88□□□□□ -0.99
TRIP4-201ENST00000261884 LCE2AQ5TA79 106 aaPredicted RBP8.88□□□□□ -0.99
TRIP4-201ENST00000261884 SPINT4Q6UDR6 99 aa8.84□□□□□ -0.99
TRIP4-201ENST00000261884 KRTAP15-1Q3LI76 137 aa8.77□□□□□ -1.01
TRIP4-201ENST00000261884 LORP23490 312 aaPredicted RBP8.74□□□□□ -1.01
TRIP4-201ENST00000261884 KRTAP9-8Q9BYQ0 159 aa8.72□□□□□ -1.01
TRIP4-201ENST00000261884 MT2AP02795 61 aa8.66□□□□□ -1.02
TRIP4-201ENST00000261884 MT1FP04733 61 aa8.61□□□□□ -1.03
TRIP4-201ENST00000261884 KRTAP10-10P60014 251 aa8.6□□□□□ -1.03
TRIP4-201ENST00000261884 R4GN34 69 aa8.57□□□□□ -1.04
TRIP4-201ENST00000261884 NDUFAF8A1L188 74 aa8.51□□□□□ -1.05
TRIP4-201ENST00000261884 SPRR2GQ9BYE4 73 aa8.44□□□□□ -1.06
TRIP4-201ENST00000261884 KRTAP9-3Q9BYQ3 159 aa8.41□□□□□ -1.06
TRIP4-201ENST00000261884 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.06
TRIP4-201ENST00000261884 PLAC4Q8WY50 150 aa8.24□□□□□ -1.09
TRIP4-201ENST00000261884 KRTAP19-8Q3LI54 63 aa8.22□□□□□ -1.09
TRIP4-201ENST00000261884 LCE2BO14633 110 aa8.19□□□□□ -1.1
TRIP4-201ENST00000261884 PP632Q6XCG6 107 aa8.17□□□□□ -1.1
TRIP4-201ENST00000261884 LCE2DQ5TA82 110 aaPredicted RBP8.14□□□□□ -1.11
TRIP4-201ENST00000261884 CAMK2N1Q7Z7J9 78 aa8.12□□□□□ -1.11
TRIP4-201ENST00000261884 MT1BP07438 61 aa8.1□□□□□ -1.11
TRIP4-201ENST00000261884 USH2AO75445 5202 aa8.06□□□□□ -1.12
TRIP4-201ENST00000261884 KRTAP23-1A1A580 65 aa7.93□□□□□ -1.14
TRIP4-201ENST00000261884 FSIP2Q5CZC0 6907 aa7.92□□□□□ -1.14
TRIP4-201ENST00000261884 KRTAP9-2Q9BYQ4 174 aa7.91□□□□□ -1.14
TRIP4-201ENST00000261884 TNP1P09430 55 aa7.89□□□□□ -1.15
TRIP4-201ENST00000261884 SSPOA2VEC9 5147 aa7.85□□□□□ -1.15
TRIP4-201ENST00000261884 LUZP6Q538Z0 58 aa7.84□□□□□ -1.15
TRIP4-201ENST00000261884 PRO2289Q9P1D8 64 aa7.82□□□□□ -1.16
TRIP4-201ENST00000261884 MT1XP80297 61 aa7.81□□□□□ -1.16
TRIP4-201ENST00000261884 KRTAP10-5P60370 271 aa7.79□□□□□ -1.16
TRIP4-201ENST00000261884 SPRR5A0A1B0GTR4 108 aa7.78□□□□□ -1.16
TRIP4-201ENST00000261884 KRTAP19-6Q3LI70 58 aa7.77□□□□□ -1.17
TRIP4-201ENST00000261884 CRCT1Q9UGL9 99 aa7.61□□□□□ -1.19
TRIP4-201ENST00000261884 A0A0A0MQY5 61 aa7.56□□□□□ -1.2
TRIP4-201ENST00000261884 FCGBPQ9Y6R7 5405 aaPredicted RBP7.54□□□□□ -1.2
TRIP4-201ENST00000261884 LCE3AQ5TA76 89 aa7.5□□□□□ -1.21
TRIP4-201ENST00000261884 KRTAP10-7P60409 375 aaPredicted RBP7.47□□□□□ -1.21
TRIP4-201ENST00000261884 KRTAP10-12P60413 245 aa7.42□□□□□ -1.22
TRIP4-201ENST00000261884 KRTAP9-6A0A140TA67 174 aa7.37□□□□□ -1.23
TRIP4-201ENST00000261884 KRTAP8-1Q8IUC2 63 aa7.35□□□□□ -1.23
TRIP4-201ENST00000261884 KMT2DO14686 5537 aa7.3□□□□□ -1.24
TRIP4-201ENST00000261884 MACF1Q9UPN3 7388 aaKnown RBP7.24□□□□□ -1.25
TRIP4-201ENST00000261884 KRTAP4-8A0A0G2JLE6 195 aa7.22□□□□□ -1.25
TRIP4-201ENST00000261884 KRTAP4-8Q9BYQ9 185 aa7.22□□□□□ -1.25
TRIP4-201ENST00000261884 KRTAP12-3P60328 96 aa7.11□□□□□ -1.27
TRIP4-201ENST00000261884 SYNE2Q8WXH0 6885 aaKnown RBP7.07□□□□□ -1.28
TRIP4-201ENST00000261884 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
TRIP4-201ENST00000261884 KRTAP19-5Q3LI72 72 aa7□□□□□ -1.29
TRIP4-201ENST00000261884 KRTAP19-7Q3SYF9 63 aa6.98□□□□□ -1.29
TRIP4-201ENST00000261884 INE1O15225 51 aa6.9□□□□□ -1.3
TRIP4-201ENST00000261884 KRTAP5-9P26371 169 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms