RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 KRTAP9-6A0A140TA67 174 aa7.68□□□□□ -1.18
GYPC-201ENST00000259254 ACYP2P14621 99 aa7.68□□□□□ -1.18
GYPC-201ENST00000259254 S4R3F8 94 aa7.68□□□□□ -1.18
GYPC-201ENST00000259254 M0R2T5 61 aa7.65□□□□□ -1.18
GYPC-201ENST00000259254 TMEM258P61165 79 aa7.64□□□□□ -1.19
GYPC-201ENST00000259254 ATP5EP56381 51 aaPredicted RBP7.62□□□□□ -1.19
GYPC-201ENST00000259254 CHKB-CPT1BH3BT56 60 aa7.61□□□□□ -1.19
GYPC-201ENST00000259254 LCA10Q71F78 164 aa7.61□□□□□ -1.19
GYPC-201ENST00000259254 FLGP20930 4061 aaPredicted RBP7.6□□□□□ -1.19
GYPC-201ENST00000259254 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
GYPC-201ENST00000259254 KRTAP10-6P60371 365 aaPredicted RBP7.59□□□□□ -1.19
GYPC-201ENST00000259254 COA5Q86WW8 74 aa7.56□□□□□ -1.2
GYPC-201ENST00000259254 CSAG1Q6PB30 78 aa7.54□□□□□ -1.2
GYPC-201ENST00000259254 SPTSSBQ8NFR3 76 aa7.5□□□□□ -1.21
GYPC-201ENST00000259254 CRCT1Q9UGL9 99 aa7.49□□□□□ -1.21
GYPC-201ENST00000259254 SERP1Q9Y6X1 66 aa7.41□□□□□ -1.22
GYPC-201ENST00000259254 FSIP2Q5CZC0 6907 aa7.39□□□□□ -1.23
GYPC-201ENST00000259254 KRTAP9-8Q9BYQ0 159 aa7.31□□□□□ -1.24
GYPC-201ENST00000259254 MT2AP02795 61 aa7.3□□□□□ -1.24
GYPC-201ENST00000259254 ADM2Q7Z4H4 148 aa7.3□□□□□ -1.24
GYPC-201ENST00000259254 H0YAA0 97 aa7.28□□□□□ -1.24
GYPC-201ENST00000259254 KRTAP10-10P60014 251 aa7.27□□□□□ -1.25
GYPC-201ENST00000259254 MT1FP04733 61 aa7.24□□□□□ -1.25
GYPC-201ENST00000259254 SEC61GP60059 68 aa7.24□□□□□ -1.25
GYPC-201ENST00000259254 RPS28P62857 69 aaKnown RBP7.22□□□□□ -1.25
GYPC-201ENST00000259254 P0C880 135 aa7.19□□□□□ -1.26
GYPC-201ENST00000259254 SMIM26A0A096LP01 95 aa7.18□□□□□ -1.26
GYPC-201ENST00000259254 A0A1B0GU69 56 aa7.18□□□□□ -1.26
GYPC-201ENST00000259254 LINC01558Q9Y6Z2 57 aa7.15□□□□□ -1.26
GYPC-201ENST00000259254 PRR15LQ9BU68 103 aa7.13□□□□□ -1.27
GYPC-201ENST00000259254 V9GYY9 64 aa7.12□□□□□ -1.27
GYPC-201ENST00000259254 CRIPTQ9P021 101 aa7.11□□□□□ -1.27
GYPC-201ENST00000259254 USH2AO75445 5202 aa7.09□□□□□ -1.27
GYPC-201ENST00000259254 KRTAP9-3Q9BYQ3 159 aa7.08□□□□□ -1.28
GYPC-201ENST00000259254 Q1T7F1 81 aa7.07□□□□□ -1.28
GYPC-201ENST00000259254 R4GN34 69 aa7.07□□□□□ -1.28
GYPC-201ENST00000259254 SSPOA2VEC9 5147 aa7.06□□□□□ -1.28
GYPC-201ENST00000259254 LCE2BO14633 110 aa7.06□□□□□ -1.28
GYPC-201ENST00000259254 M0QZ58 72 aa7.05□□□□□ -1.28
GYPC-201ENST00000259254 A0A1B0GU33 70 aa7.03□□□□□ -1.28
GYPC-201ENST00000259254 PSPHP1O15172 72 aa7.02□□□□□ -1.29
GYPC-201ENST00000259254 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
GYPC-201ENST00000259254 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.98□□□□□ -1.29
GYPC-201ENST00000259254 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
GYPC-201ENST00000259254 LINC01554Q52M75 96 aa6.95□□□□□ -1.3
GYPC-201ENST00000259254 KRTAP13-4Q3LI77 160 aa6.93□□□□□ -1.3
GYPC-201ENST00000259254 SPATA8Q6RVD6 105 aa6.93□□□□□ -1.3
GYPC-201ENST00000259254 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
GYPC-201ENST00000259254 Q5VV11 94 aa6.91□□□□□ -1.3
GYPC-201ENST00000259254 FCGBPQ9Y6R7 5405 aaPredicted RBP6.89□□□□□ -1.31
GYPC-201ENST00000259254 UQCR11O14957 56 aa6.89□□□□□ -1.31
GYPC-201ENST00000259254 A0A0D9SG42 100 aa6.86□□□□□ -1.31
GYPC-201ENST00000259254 KRTAP19-8Q3LI54 63 aa6.84□□□□□ -1.31
GYPC-201ENST00000259254 KRTAP19-6Q3LI70 58 aa6.83□□□□□ -1.32
GYPC-201ENST00000259254 A6NED7 52 aa6.82□□□□□ -1.32
GYPC-201ENST00000259254 MIR22HGQ0VDD5 57 aa6.8□□□□□ -1.32
GYPC-201ENST00000259254 A8MU10 97 aa6.79□□□□□ -1.32
GYPC-201ENST00000259254 MT1BP07438 61 aa6.77□□□□□ -1.33
GYPC-201ENST00000259254 PLAC4Q8WY50 150 aa6.77□□□□□ -1.33
GYPC-201ENST00000259254 SVIPQ8NHG7 77 aa6.75□□□□□ -1.33
GYPC-201ENST00000259254 A6NN06 94 aa6.74□□□□□ -1.33
GYPC-201ENST00000259254 SPINT4Q6UDR6 99 aa6.72□□□□□ -1.33
GYPC-201ENST00000259254 MACF1Q9UPN3 7388 aaKnown RBP6.67□□□□□ -1.34
GYPC-201ENST00000259254 KRTAP12-1P59990 96 aa6.66□□□□□ -1.34
GYPC-201ENST00000259254 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
GYPC-201ENST00000259254 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
GYPC-201ENST00000259254 CDC42SE1Q9NRR8 79 aa6.61□□□□□ -1.35
GYPC-201ENST00000259254 K7ERS5 55 aa6.59□□□□□ -1.35
GYPC-201ENST00000259254 SYNE2Q8WXH0 6885 aaKnown RBP6.58□□□□□ -1.36
GYPC-201ENST00000259254 BRK1Q8WUW1 75 aa6.53□□□□□ -1.36
GYPC-201ENST00000259254 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
GYPC-201ENST00000259254 KRTAP6-3Q3LI67 103 aa6.52□□□□□ -1.37
GYPC-201ENST00000259254 KRTAP10-5P60370 271 aa6.5□□□□□ -1.37
GYPC-201ENST00000259254 MT1XP80297 61 aa6.49□□□□□ -1.37
GYPC-201ENST00000259254 C10orf95Q9H7T3 257 aa6.32□□□□□ -1.4
GYPC-201ENST00000259254 KRTAP10-7P60409 375 aaPredicted RBP6.23□□□□□ -1.41
GYPC-201ENST00000259254 ROMO1P60602 79 aa6.23□□□□□ -1.41
GYPC-201ENST00000259254 TNP1P09430 55 aa6.22□□□□□ -1.41
GYPC-201ENST00000259254 NEBP20929 6669 aa6.22□□□□□ -1.41
GYPC-201ENST00000259254 MUC12Q9UKN1 5478 aa6.21□□□□□ -1.42
GYPC-201ENST00000259254 KRTAP5-9P26371 169 aa6.21□□□□□ -1.42
GYPC-201ENST00000259254 PRO0628Q9UI54 55 aa6.2□□□□□ -1.42
GYPC-201ENST00000259254 KRTAP10-12P60413 245 aa6.15□□□□□ -1.42
GYPC-201ENST00000259254 PMAIP1Q13794 54 aa6.15□□□□□ -1.42
GYPC-201ENST00000259254 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
GYPC-201ENST00000259254 KMT2DO14686 5537 aa6.06□□□□□ -1.44
GYPC-201ENST00000259254 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
GYPC-201ENST00000259254 KRTAP20-1Q3LI63 56 aa6.05□□□□□ -1.44
GYPC-201ENST00000259254 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
GYPC-201ENST00000259254 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
GYPC-201ENST00000259254 SPRR2FQ96RM1 72 aa6□□□□□ -1.45
GYPC-201ENST00000259254 MDN1Q9NU22 5596 aa6□□□□□ -1.45
GYPC-201ENST00000259254 LCE3AQ5TA76 89 aa5.99□□□□□ -1.45
GYPC-201ENST00000259254 SPRR2EP22531 72 aa5.92□□□□□ -1.46
GYPC-201ENST00000259254 SPRR2BP35325 72 aa5.92□□□□□ -1.46
GYPC-201ENST00000259254 SPRR2AP35326 72 aa5.92□□□□□ -1.46
GYPC-201ENST00000259254 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
GYPC-201ENST00000259254 KRTAP2-3P0C7H8 128 aa5.88□□□□□ -1.47
GYPC-201ENST00000259254 KRTAP2-4Q9BYR9 128 aa5.88□□□□□ -1.47
GYPC-201ENST00000259254 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms