RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 S4R3F8 94 aa4.49□□□□□ -1.69
CALCOCO2-201ENST00000258947 LRP2P98164 4655 aa4.47□□□□□ -1.69
CALCOCO2-201ENST00000258947 UQCR11O14957 56 aa4.47□□□□□ -1.69
CALCOCO2-201ENST00000258947 A8MU10 97 aa4.46□□□□□ -1.7
CALCOCO2-201ENST00000258947 PMAIP1Q13794 54 aa4.44□□□□□ -1.7
CALCOCO2-201ENST00000258947 LPAP08519 4548 aa4.44□□□□□ -1.7
CALCOCO2-201ENST00000258947 LCA10Q71F78 164 aa4.44□□□□□ -1.7
CALCOCO2-201ENST00000258947 MIR22HGQ0VDD5 57 aa4.43□□□□□ -1.7
CALCOCO2-201ENST00000258947 H1FX-AS1Q4G0G2 97 aa4.43□□□□□ -1.7
CALCOCO2-201ENST00000258947 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
CALCOCO2-201ENST00000258947 A0A1B0GU33 70 aa4.4□□□□□ -1.7
CALCOCO2-201ENST00000258947 CSAG1Q6PB30 78 aa4.4□□□□□ -1.71
CALCOCO2-201ENST00000258947 A0A0D9SG42 100 aa4.36□□□□□ -1.71
CALCOCO2-201ENST00000258947 SPATA8Q6RVD6 105 aa4.36□□□□□ -1.71
CALCOCO2-201ENST00000258947 ADM2Q7Z4H4 148 aa4.34□□□□□ -1.72
CALCOCO2-201ENST00000258947 K7ERS5 55 aa4.33□□□□□ -1.72
CALCOCO2-201ENST00000258947 HERC1Q15751 4861 aa4.33□□□□□ -1.72
CALCOCO2-201ENST00000258947 PCLOQ9Y6V0 5065 aa4.31□□□□□ -1.72
CALCOCO2-201ENST00000258947 LINC01554Q52M75 96 aa4.31□□□□□ -1.72
CALCOCO2-201ENST00000258947 KRTAP3-3Q9BYR6 98 aa4.29□□□□□ -1.72
CALCOCO2-201ENST00000258947 KRTAP4-1Q9BYQ7 146 aa4.28□□□□□ -1.72
CALCOCO2-201ENST00000258947 M0R2T5 61 aa4.28□□□□□ -1.72
CALCOCO2-201ENST00000258947 P0C880 135 aa4.27□□□□□ -1.73
CALCOCO2-201ENST00000258947 H0YAA0 97 aa4.26□□□□□ -1.73
CALCOCO2-201ENST00000258947 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
CALCOCO2-201ENST00000258947 SPINT4Q6UDR6 99 aa4.25□□□□□ -1.73
CALCOCO2-201ENST00000258947 R4GN34 69 aa4.24□□□□□ -1.73
CALCOCO2-201ENST00000258947 MUC2Q02817 5179 aa4.23□□□□□ -1.73
CALCOCO2-201ENST00000258947 M0QZ58 72 aa4.22□□□□□ -1.73
CALCOCO2-201ENST00000258947 KRTAP10-6P60371 365 aaPredicted RBP4.2□□□□□ -1.74
CALCOCO2-201ENST00000258947 A6NN06 94 aa4.18□□□□□ -1.74
CALCOCO2-201ENST00000258947 KTN1-AS1Q86SY8 53 aa4.17□□□□□ -1.74
CALCOCO2-201ENST00000258947 KRTAP3-2Q9BYR7 98 aa4.17□□□□□ -1.74
CALCOCO2-201ENST00000258947 KRTAP13-4Q3LI77 160 aa4.16□□□□□ -1.74
CALCOCO2-201ENST00000258947 HMCN2Q8NDA2 5059 aa4.16□□□□□ -1.74
CALCOCO2-201ENST00000258947 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
CALCOCO2-201ENST00000258947 RNF213Q63HN8 5207 aa4.13□□□□□ -1.75
CALCOCO2-201ENST00000258947 UBR4Q5T4S7 5183 aa4.11□□□□□ -1.75
CALCOCO2-201ENST00000258947 CRIPTQ9P021 101 aa4.1□□□□□ -1.75
CALCOCO2-201ENST00000258947 MUC17Q685J3 4493 aa4.08□□□□□ -1.76
CALCOCO2-201ENST00000258947 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
CALCOCO2-201ENST00000258947 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
CALCOCO2-201ENST00000258947 LORP23490 312 aaPredicted RBP4.05□□□□□ -1.76
CALCOCO2-201ENST00000258947 KRTAP12-2P59991 146 aa4.05□□□□□ -1.76
CALCOCO2-201ENST00000258947 ROMO1P60602 79 aa4.03□□□□□ -1.76
CALCOCO2-201ENST00000258947 KRTAP19-2Q3LHN2 52 aa4.01□□□□□ -1.77
CALCOCO2-201ENST00000258947 KRTAP12-1P59990 96 aa4.01□□□□□ -1.77
CALCOCO2-201ENST00000258947 KRTAP10-10P60014 251 aa4□□□□□ -1.77
CALCOCO2-201ENST00000258947 MT1HP80294 61 aa3.96□□□□□ -1.78
CALCOCO2-201ENST00000258947 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.78
CALCOCO2-201ENST00000258947 LCE2CQ5TA81 110 aa3.95□□□□□ -1.78
CALCOCO2-201ENST00000258947 PLAC4Q8WY50 150 aa3.93□□□□□ -1.78
CALCOCO2-201ENST00000258947 C10orf95Q9H7T3 257 aa3.91□□□□□ -1.78
CALCOCO2-201ENST00000258947 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
CALCOCO2-201ENST00000258947 MT2AP02795 61 aa3.84□□□□□ -1.79
CALCOCO2-201ENST00000258947 MT1FP04733 61 aa3.83□□□□□ -1.8
CALCOCO2-201ENST00000258947 KRTAP9-8Q9BYQ0 159 aa3.77□□□□□ -1.81
CALCOCO2-201ENST00000258947 TNP1P09430 55 aa3.76□□□□□ -1.81
CALCOCO2-201ENST00000258947 KRTAP19-1Q8IUB9 90 aa3.75□□□□□ -1.81
CALCOCO2-201ENST00000258947 SPRR2GQ9BYE4 73 aa3.75□□□□□ -1.81
CALCOCO2-201ENST00000258947 PRO2289Q9P1D8 64 aa3.63□□□□□ -1.83
CALCOCO2-201ENST00000258947 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
CALCOCO2-201ENST00000258947 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
CALCOCO2-201ENST00000258947 LCE2AQ5TA79 106 aaPredicted RBP3.61□□□□□ -1.83
CALCOCO2-201ENST00000258947 FSIP2Q5CZC0 6907 aa3.61□□□□□ -1.83
CALCOCO2-201ENST00000258947 KRTAP19-8Q3LI54 63 aa3.6□□□□□ -1.83
CALCOCO2-201ENST00000258947 MT1BP07438 61 aa3.6□□□□□ -1.83
CALCOCO2-201ENST00000258947 USH2AO75445 5202 aa3.58□□□□□ -1.84
CALCOCO2-201ENST00000258947 LCE2BO14633 110 aa3.55□□□□□ -1.84
CALCOCO2-201ENST00000258947 MT1XP80297 61 aa3.52□□□□□ -1.85
CALCOCO2-201ENST00000258947 LCE3AQ5TA76 89 aa3.52□□□□□ -1.85
CALCOCO2-201ENST00000258947 KRTAP10-5P60370 271 aa3.51□□□□□ -1.85
CALCOCO2-201ENST00000258947 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
CALCOCO2-201ENST00000258947 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
CALCOCO2-201ENST00000258947 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
CALCOCO2-201ENST00000258947 KRTAP23-1A1A580 65 aa3.41□□□□□ -1.86
CALCOCO2-201ENST00000258947 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
CALCOCO2-201ENST00000258947 KRTAP12-3P60328 96 aa3.39□□□□□ -1.87
CALCOCO2-201ENST00000258947 KRTAP15-1Q3LI76 137 aa3.39□□□□□ -1.87
CALCOCO2-201ENST00000258947 KMT2DO14686 5537 aa3.36□□□□□ -1.87
CALCOCO2-201ENST00000258947 KRTAP4-8A0A0G2JLE6 195 aa3.34□□□□□ -1.87
CALCOCO2-201ENST00000258947 KRTAP4-8Q9BYQ9 185 aa3.34□□□□□ -1.87
CALCOCO2-201ENST00000258947 KRTAP8-1Q8IUC2 63 aa3.33□□□□□ -1.88
CALCOCO2-201ENST00000258947 SSPOA2VEC9 5147 aa3.32□□□□□ -1.88
CALCOCO2-201ENST00000258947 KRTAP19-5Q3LI72 72 aa3.3□□□□□ -1.88
CALCOCO2-201ENST00000258947 H3BS24 57 aa3.26□□□□□ -1.89
CALCOCO2-201ENST00000258947 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
CALCOCO2-201ENST00000258947 LCE2DQ5TA82 110 aaPredicted RBP3.21□□□□□ -1.9
CALCOCO2-201ENST00000258947 KRTAP9-2Q9BYQ4 174 aa3.19□□□□□ -1.9
CALCOCO2-201ENST00000258947 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
CALCOCO2-201ENST00000258947 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
CALCOCO2-201ENST00000258947 KRTAP19-7Q3SYF9 63 aa3.12□□□□□ -1.91
CALCOCO2-201ENST00000258947 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
CALCOCO2-201ENST00000258947 CRCT1Q9UGL9 99 aa3.11□□□□□ -1.91
CALCOCO2-201ENST00000258947 KRTAP4-7Q9BYR0 210 aa3.09□□□□□ -1.92
CALCOCO2-201ENST00000258947 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
CALCOCO2-201ENST00000258947 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
CALCOCO2-201ENST00000258947 MT1EP04732 61 aa3.08□□□□□ -1.92
CALCOCO2-201ENST00000258947 MUC12Q9UKN1 5478 aa3.08□□□□□ -1.92
CALCOCO2-201ENST00000258947 SYNE2Q8WXH0 6885 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms