RNA–Protein interactions for RNA: ENST00000255304.8

USPL1-201, Transcript of ubiquitin specific peptidase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USPL1, Length 3,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-201ENST00000255304 SPINT4Q6UDR6 99 aa4.32□□□□□ -1.72
USPL1-201ENST00000255304 MUC2Q02817 5179 aa4.32□□□□□ -1.72
USPL1-201ENST00000255304 HERC2O95714 4834 aa4.31□□□□□ -1.72
USPL1-201ENST00000255304 Q6ZSA8 131 aa4.29□□□□□ -1.72
USPL1-201ENST00000255304 DMAC1Q96GE9 116 aa4.28□□□□□ -1.72
USPL1-201ENST00000255304 BIRC6Q9NR09 4857 aa4.28□□□□□ -1.72
USPL1-201ENST00000255304 ROMO1P60602 79 aa4.28□□□□□ -1.72
USPL1-201ENST00000255304 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
USPL1-201ENST00000255304 A8MUU9 505 aa4.24□□□□□ -1.73
USPL1-201ENST00000255304 A0A1B0GU33 70 aa4.22□□□□□ -1.73
USPL1-201ENST00000255304 ASB16-AS1Q495Z4 193 aa4.22□□□□□ -1.73
USPL1-201ENST00000255304 LRP2P98164 4655 aa4.21□□□□□ -1.73
USPL1-201ENST00000255304 NDUFAF8A1L188 74 aa4.21□□□□□ -1.74
USPL1-201ENST00000255304 KRTAP1-4P0C5Y4 121 aa4.2□□□□□ -1.74
USPL1-201ENST00000255304 KRTAP4-5Q9BYR2 181 aa4.2□□□□□ -1.74
USPL1-201ENST00000255304 A0A1B0GVY2 172 aa4.18□□□□□ -1.74
USPL1-201ENST00000255304 H0YAA0 97 aa4.18□□□□□ -1.74
USPL1-201ENST00000255304 P0C880 135 aa4.18□□□□□ -1.74
USPL1-201ENST00000255304 RNF213Q63HN8 5207 aa4.18□□□□□ -1.74
USPL1-201ENST00000255304 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
USPL1-201ENST00000255304 UBR4Q5T4S7 5183 aa4.16□□□□□ -1.74
USPL1-201ENST00000255304 M0R2T5 61 aa4.16□□□□□ -1.74
USPL1-201ENST00000255304 KRTAP13-3Q3SY46 172 aa4.15□□□□□ -1.74
USPL1-201ENST00000255304 S4R3F8 94 aa4.14□□□□□ -1.75
USPL1-201ENST00000255304 KRTAP10-4P60372 401 aaPredicted RBP4.11□□□□□ -1.75
USPL1-201ENST00000255304 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.75
USPL1-201ENST00000255304 H1FX-AS1Q4G0G2 97 aa4.09□□□□□ -1.76
USPL1-201ENST00000255304 R4GN34 69 aa4.08□□□□□ -1.76
USPL1-201ENST00000255304 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
USPL1-201ENST00000255304 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
USPL1-201ENST00000255304 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
USPL1-201ENST00000255304 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
USPL1-201ENST00000255304 M0QZ58 72 aa4.05□□□□□ -1.76
USPL1-201ENST00000255304 C20orf166-AS1Q96NR2 134 aa4.02□□□□□ -1.77
USPL1-201ENST00000255304 SEC61BP60468 96 aaKnown RBP4.02□□□□□ -1.77
USPL1-201ENST00000255304 TPRXLQ17RH7 258 aa4.01□□□□□ -1.77
USPL1-201ENST00000255304 RPL37P61927 97 aaKnown RBP4□□□□□ -1.77
USPL1-201ENST00000255304 XP32Q5T750 250 aa4□□□□□ -1.77
USPL1-201ENST00000255304 RPS29P62273 56 aaKnown RBP3.95□□□□□ -1.78
USPL1-201ENST00000255304 MUC17Q685J3 4493 aa3.95□□□□□ -1.78
USPL1-201ENST00000255304 KRTAP3-1Q9BYR8 98 aa3.94□□□□□ -1.78
USPL1-201ENST00000255304 KRTAP13-4Q3LI77 160 aa3.91□□□□□ -1.78
USPL1-201ENST00000255304 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
USPL1-201ENST00000255304 KRTAP10-8P60410 259 aa3.88□□□□□ -1.79
USPL1-201ENST00000255304 MT1HL1P0DM35 61 aa3.86□□□□□ -1.79
USPL1-201ENST00000255304 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
USPL1-201ENST00000255304 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
USPL1-201ENST00000255304 FLGP20930 4061 aaPredicted RBP3.79□□□□□ -1.8
USPL1-201ENST00000255304 KRTAP10-6P60371 365 aaPredicted RBP3.79□□□□□ -1.8
USPL1-201ENST00000255304 PLAC4Q8WY50 150 aa3.74□□□□□ -1.81
USPL1-201ENST00000255304 KRTAP3-2Q9BYR7 98 aa3.7□□□□□ -1.82
USPL1-201ENST00000255304 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
USPL1-201ENST00000255304 KRTAP3-3Q9BYR6 98 aa3.69□□□□□ -1.82
USPL1-201ENST00000255304 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
USPL1-201ENST00000255304 KRTAP4-1Q9BYQ7 146 aa3.67□□□□□ -1.82
USPL1-201ENST00000255304 USH2AO75445 5202 aa3.64□□□□□ -1.83
USPL1-201ENST00000255304 TNP1P09430 55 aa3.6□□□□□ -1.83
USPL1-201ENST00000255304 FSIP2Q5CZC0 6907 aa3.55□□□□□ -1.84
USPL1-201ENST00000255304 LORP23490 312 aaPredicted RBP3.54□□□□□ -1.84
USPL1-201ENST00000255304 KRTAP19-2Q3LHN2 52 aa3.53□□□□□ -1.84
USPL1-201ENST00000255304 LCE2DQ5TA82 110 aaPredicted RBP3.44□□□□□ -1.86
USPL1-201ENST00000255304 LCE2CQ5TA81 110 aa3.44□□□□□ -1.86
USPL1-201ENST00000255304 KMT2DO14686 5537 aa3.36□□□□□ -1.87
USPL1-201ENST00000255304 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
USPL1-201ENST00000255304 SSPOA2VEC9 5147 aa3.3□□□□□ -1.88
USPL1-201ENST00000255304 PRO2289Q9P1D8 64 aa3.29□□□□□ -1.88
USPL1-201ENST00000255304 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
USPL1-201ENST00000255304 MT1HP80294 61 aa3.26□□□□□ -1.89
USPL1-201ENST00000255304 LCE2AQ5TA79 106 aaPredicted RBP3.23□□□□□ -1.89
USPL1-201ENST00000255304 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
USPL1-201ENST00000255304 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
USPL1-201ENST00000255304 KRTAP9-8Q9BYQ0 159 aa3.18□□□□□ -1.9
USPL1-201ENST00000255304 MT1FP04733 61 aa3.16□□□□□ -1.9
USPL1-201ENST00000255304 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
USPL1-201ENST00000255304 MT2AP02795 61 aa3.15□□□□□ -1.9
USPL1-201ENST00000255304 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
USPL1-201ENST00000255304 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
USPL1-201ENST00000255304 LCE2BO14633 110 aa3.08□□□□□ -1.92
USPL1-201ENST00000255304 FCGBPQ9Y6R7 5405 aaPredicted RBP3.07□□□□□ -1.92
USPL1-201ENST00000255304 KRTAP19-1Q8IUB9 90 aa3.05□□□□□ -1.92
USPL1-201ENST00000255304 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.92
USPL1-201ENST00000255304 KRTAP9-3Q9BYQ3 159 aa3.03□□□□□ -1.92
USPL1-201ENST00000255304 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
USPL1-201ENST00000255304 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
USPL1-201ENST00000255304 INE1O15225 51 aa3.02□□□□□ -1.93
USPL1-201ENST00000255304 SPRR2GQ9BYE4 73 aa3.01□□□□□ -1.93
USPL1-201ENST00000255304 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
USPL1-201ENST00000255304 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
USPL1-201ENST00000255304 KRTAP10-7P60409 375 aaPredicted RBP2.96□□□□□ -1.94
USPL1-201ENST00000255304 MT1BP07438 61 aa2.94□□□□□ -1.94
USPL1-201ENST00000255304 KRTAP4-8A0A0G2JLE6 195 aa2.94□□□□□ -1.94
USPL1-201ENST00000255304 KRTAP4-8Q9BYQ9 185 aa2.94□□□□□ -1.94
USPL1-201ENST00000255304 MDN1Q9NU22 5596 aa2.93□□□□□ -1.94
USPL1-201ENST00000255304 KRTAP8-1Q8IUC2 63 aa2.92□□□□□ -1.94
USPL1-201ENST00000255304 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
USPL1-201ENST00000255304 MT1XP80297 61 aa2.88□□□□□ -1.95
USPL1-201ENST00000255304 KRTAP23-1A1A580 65 aa2.87□□□□□ -1.95
USPL1-201ENST00000255304 KRTAP9-2Q9BYQ4 174 aa2.87□□□□□ -1.95
USPL1-201ENST00000255304 KRTAP10-5P60370 271 aa2.85□□□□□ -1.95
USPL1-201ENST00000255304 SPRR2FQ96RM1 72 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms