RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 KRTAP4-1Q9BYQ7 146 aa9.47□□□□□ -0.89
TNFSF9-201ENST00000245817 SPTSSBQ8NFR3 76 aa9.46□□□□□ -0.89
TNFSF9-201ENST00000245817 H1FX-AS1Q4G0G2 97 aa9.44□□□□□ -0.9
TNFSF9-201ENST00000245817 V9GYY9 64 aa9.43□□□□□ -0.9
TNFSF9-201ENST00000245817 Q1T7F1 81 aa9.39□□□□□ -0.91
TNFSF9-201ENST00000245817 S4R3F8 94 aa9.39□□□□□ -0.91
TNFSF9-201ENST00000245817 LCA10Q71F78 164 aa9.32□□□□□ -0.92
TNFSF9-201ENST00000245817 LINC01558Q9Y6Z2 57 aa9.32□□□□□ -0.92
TNFSF9-201ENST00000245817 PRR15LQ9BU68 103 aa9.26□□□□□ -0.93
TNFSF9-201ENST00000245817 PSPHP1O15172 72 aa9.26□□□□□ -0.93
TNFSF9-201ENST00000245817 SEC61GP60059 68 aa9.23□□□□□ -0.93
TNFSF9-201ENST00000245817 A0A1B0GU69 56 aa9.23□□□□□ -0.93
TNFSF9-201ENST00000245817 CSAG1Q6PB30 78 aa9.2□□□□□ -0.94
TNFSF9-201ENST00000245817 KRTAP19-2Q3LHN2 52 aa9.17□□□□□ -0.94
TNFSF9-201ENST00000245817 FAT4Q6V0I7 4981 aa9.13□□□□□ -0.95
TNFSF9-201ENST00000245817 Q5VV11 94 aa9.12□□□□□ -0.95
TNFSF9-201ENST00000245817 A6NED7 52 aa9□□□□□ -0.97
TNFSF9-201ENST00000245817 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
TNFSF9-201ENST00000245817 ADM2Q7Z4H4 148 aa8.97□□□□□ -0.97
TNFSF9-201ENST00000245817 FLGP20930 4061 aaPredicted RBP8.96□□□□□ -0.98
TNFSF9-201ENST00000245817 UQCR11O14957 56 aa8.94□□□□□ -0.98
TNFSF9-201ENST00000245817 H0YAA0 97 aa8.94□□□□□ -0.98
TNFSF9-201ENST00000245817 A0A1B0GU33 70 aa8.93□□□□□ -0.98
TNFSF9-201ENST00000245817 M0R2T5 61 aa8.9□□□□□ -0.98
TNFSF9-201ENST00000245817 KRTAP10-6P60371 365 aaPredicted RBP8.9□□□□□ -0.98
TNFSF9-201ENST00000245817 BRK1Q8WUW1 75 aa8.9□□□□□ -0.98
TNFSF9-201ENST00000245817 LCE2AQ5TA79 106 aaPredicted RBP8.87□□□□□ -0.99
TNFSF9-201ENST00000245817 P0C880 135 aa8.86□□□□□ -0.99
TNFSF9-201ENST00000245817 MT1HP80294 61 aa8.86□□□□□ -0.99
TNFSF9-201ENST00000245817 MIR22HGQ0VDD5 57 aa8.83□□□□□ -1
TNFSF9-201ENST00000245817 CDC42SE1Q9NRR8 79 aa8.81□□□□□ -1
TNFSF9-201ENST00000245817 SPATA8Q6RVD6 105 aa8.78□□□□□ -1
TNFSF9-201ENST00000245817 SVIPQ8NHG7 77 aa8.73□□□□□ -1.01
TNFSF9-201ENST00000245817 M0QZ58 72 aa8.7□□□□□ -1.02
TNFSF9-201ENST00000245817 A8MU10 97 aa8.68□□□□□ -1.02
TNFSF9-201ENST00000245817 R4GN34 69 aa8.68□□□□□ -1.02
TNFSF9-201ENST00000245817 PRO0628Q9UI54 55 aa8.67□□□□□ -1.02
TNFSF9-201ENST00000245817 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.03
TNFSF9-201ENST00000245817 LCE2BO14633 110 aa8.59□□□□□ -1.03
TNFSF9-201ENST00000245817 CRIPTQ9P021 101 aa8.59□□□□□ -1.03
TNFSF9-201ENST00000245817 A0A0D9SG42 100 aa8.59□□□□□ -1.03
TNFSF9-201ENST00000245817 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
TNFSF9-201ENST00000245817 LINC01554Q52M75 96 aa8.52□□□□□ -1.05
TNFSF9-201ENST00000245817 K7ERS5 55 aa8.51□□□□□ -1.05
TNFSF9-201ENST00000245817 KRTAP10-10P60014 251 aa8.51□□□□□ -1.05
TNFSF9-201ENST00000245817 KRTAP9-8Q9BYQ0 159 aa8.5□□□□□ -1.05
TNFSF9-201ENST00000245817 MT2AP02795 61 aa8.49□□□□□ -1.05
TNFSF9-201ENST00000245817 LOC100996750A0A140TA64 210 aa8.46□□□□□ -1.06
TNFSF9-201ENST00000245817 KRTAP4-6Q9BYQ5 205 aa8.46□□□□□ -1.06
TNFSF9-201ENST00000245817 MT1FP04733 61 aa8.44□□□□□ -1.06
TNFSF9-201ENST00000245817 PMAIP1Q13794 54 aa8.42□□□□□ -1.06
TNFSF9-201ENST00000245817 SPINT4Q6UDR6 99 aa8.4□□□□□ -1.06
TNFSF9-201ENST00000245817 KRTAP12-1P59990 96 aa8.35□□□□□ -1.07
TNFSF9-201ENST00000245817 SPRR2GQ9BYE4 73 aa8.34□□□□□ -1.07
TNFSF9-201ENST00000245817 KRTAP12-2P59991 146 aa8.34□□□□□ -1.08
TNFSF9-201ENST00000245817 A6NN06 94 aa8.31□□□□□ -1.08
TNFSF9-201ENST00000245817 KRTAP19-1Q8IUB9 90 aa8.28□□□□□ -1.08
TNFSF9-201ENST00000245817 KRTAP9-2Q9BYQ4 174 aa8.21□□□□□ -1.09
TNFSF9-201ENST00000245817 KRTAP9-3Q9BYQ3 159 aa8.21□□□□□ -1.1
TNFSF9-201ENST00000245817 PLAC4Q8WY50 150 aa8.18□□□□□ -1.1
TNFSF9-201ENST00000245817 CAMK2N1Q7Z7J9 78 aa8.15□□□□□ -1.1
TNFSF9-201ENST00000245817 KRTAP19-8Q3LI54 63 aa8.11□□□□□ -1.11
TNFSF9-201ENST00000245817 ROMO1P60602 79 aa8.08□□□□□ -1.12
TNFSF9-201ENST00000245817 FSIP2Q5CZC0 6907 aa8.03□□□□□ -1.12
TNFSF9-201ENST00000245817 KTN1-AS1Q86SY8 53 aa8.03□□□□□ -1.12
TNFSF9-201ENST00000245817 USH2AO75445 5202 aa8.01□□□□□ -1.13
TNFSF9-201ENST00000245817 MT1BP07438 61 aa7.98□□□□□ -1.13
TNFSF9-201ENST00000245817 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
TNFSF9-201ENST00000245817 CRCT1Q9UGL9 99 aa7.86□□□□□ -1.15
TNFSF9-201ENST00000245817 SSPOA2VEC9 5147 aa7.83□□□□□ -1.16
TNFSF9-201ENST00000245817 PRAC1Q96KF2 57 aa7.83□□□□□ -1.16
TNFSF9-201ENST00000245817 KRTAP9-6A0A140TA67 174 aa7.77□□□□□ -1.17
TNFSF9-201ENST00000245817 PRO2289Q9P1D8 64 aa7.77□□□□□ -1.17
TNFSF9-201ENST00000245817 KRTAP25-1Q3LHN0 102 aa7.75□□□□□ -1.17
TNFSF9-201ENST00000245817 TNP1P09430 55 aa7.73□□□□□ -1.17
TNFSF9-201ENST00000245817 MT1XP80297 61 aa7.73□□□□□ -1.17
TNFSF9-201ENST00000245817 KRTAP10-5P60370 271 aa7.73□□□□□ -1.17
TNFSF9-201ENST00000245817 KRTAP19-6Q3LI70 58 aa7.67□□□□□ -1.18
TNFSF9-201ENST00000245817 FCGBPQ9Y6R7 5405 aaPredicted RBP7.59□□□□□ -1.19
TNFSF9-201ENST00000245817 KRTAP4-8Q9BYQ9 185 aa7.57□□□□□ -1.2
TNFSF9-201ENST00000245817 PP632Q6XCG6 107 aa7.51□□□□□ -1.21
TNFSF9-201ENST00000245817 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.22
TNFSF9-201ENST00000245817 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.45□□□□□ -1.22
TNFSF9-201ENST00000245817 KRTAP10-7P60409 375 aaPredicted RBP7.43□□□□□ -1.22
TNFSF9-201ENST00000245817 KRTAP10-12P60413 245 aa7.4□□□□□ -1.23
TNFSF9-201ENST00000245817 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
TNFSF9-201ENST00000245817 MACF1Q9UPN3 7388 aaKnown RBP7.32□□□□□ -1.24
TNFSF9-201ENST00000245817 SYNE2Q8WXH0 6885 aaKnown RBP7.21□□□□□ -1.26
TNFSF9-201ENST00000245817 KRTAP8-1Q8IUC2 63 aa7.18□□□□□ -1.26
TNFSF9-201ENST00000245817 LCE3BQ5TA77 95 aa7.14□□□□□ -1.27
TNFSF9-201ENST00000245817 KRTAP4-8A0A0G2JLE6 195 aa7.13□□□□□ -1.27
TNFSF9-201ENST00000245817 KMT2DO14686 5537 aa7.12□□□□□ -1.27
TNFSF9-201ENST00000245817 KRTAP12-3P60328 96 aa7.07□□□□□ -1.28
TNFSF9-201ENST00000245817 KRTAP9-7A8MTY7 169 aa7.06□□□□□ -1.28
TNFSF9-201ENST00000245817 KRTAP9-9Q9BYP9 154 aa7.06□□□□□ -1.28
TNFSF9-201ENST00000245817 KRTAP9-4Q9BYQ2 154 aa7.06□□□□□ -1.28
TNFSF9-201ENST00000245817 KRTAP4-12Q9BQ66 201 aa7.05□□□□□ -1.28
TNFSF9-201ENST00000245817 KRTAP19-5Q3LI72 72 aa7.02□□□□□ -1.29
TNFSF9-201ENST00000245817 KRTAP6-3Q3LI67 103 aa6.98□□□□□ -1.29
TNFSF9-201ENST00000245817 KRTAP15-1Q3LI76 137 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms