RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 MPLKIPQ8TAP9 179 aa9.05□□□□□ -0.96
HOXC6-201ENST00000243108 MT1HP80294 61 aa9.05□□□□□ -0.96
HOXC6-201ENST00000243108 SPINK7P58062 85 aa9.02□□□□□ -0.96
HOXC6-201ENST00000243108 ATP11AUNQ6ZP68 121 aa9.02□□□□□ -0.96
HOXC6-201ENST00000243108 V9GYY9 64 aa8.99□□□□□ -0.97
HOXC6-201ENST00000243108 FLGP20930 4061 aaPredicted RBP8.98□□□□□ -0.97
HOXC6-201ENST00000243108 A8MUN3 132 aa8.97□□□□□ -0.97
HOXC6-201ENST00000243108 KRTAP9-6A0A140TA67 174 aa8.94□□□□□ -0.98
HOXC6-201ENST00000243108 CHKB-CPT1BH3BT56 60 aa8.92□□□□□ -0.98
HOXC6-201ENST00000243108 KRTAP3-1Q9BYR8 98 aa8.88□□□□□ -0.99
HOXC6-201ENST00000243108 LORP23490 312 aaPredicted RBP8.88□□□□□ -0.99
HOXC6-201ENST00000243108 LINC01558Q9Y6Z2 57 aa8.87□□□□□ -0.99
HOXC6-201ENST00000243108 FSIP2Q5CZC0 6907 aa8.87□□□□□ -0.99
HOXC6-201ENST00000243108 KRTAP10-6P60371 365 aaPredicted RBP8.86□□□□□ -0.99
HOXC6-201ENST00000243108 PSPHP1O15172 72 aa8.85□□□□□ -0.99
HOXC6-201ENST00000243108 COX6B2Q6YFQ2 88 aa8.85□□□□□ -0.99
HOXC6-201ENST00000243108 Q5VV11 94 aa8.8□□□□□ -1
HOXC6-201ENST00000243108 PRR15LQ9BU68 103 aa8.8□□□□□ -1
HOXC6-201ENST00000243108 M0R2T5 61 aa8.79□□□□□ -1
HOXC6-201ENST00000243108 CRCT1Q9UGL9 99 aa8.73□□□□□ -1.01
HOXC6-201ENST00000243108 SPTSSBQ8NFR3 76 aa8.71□□□□□ -1.02
HOXC6-201ENST00000243108 LCE2BO14633 110 aa8.66□□□□□ -1.02
HOXC6-201ENST00000243108 BRK1Q8WUW1 75 aa8.64□□□□□ -1.03
HOXC6-201ENST00000243108 A0A1B0GU69 56 aa8.63□□□□□ -1.03
HOXC6-201ENST00000243108 KRTAP9-8Q9BYQ0 159 aa8.57□□□□□ -1.04
HOXC6-201ENST00000243108 PRO0628Q9UI54 55 aa8.57□□□□□ -1.04
HOXC6-201ENST00000243108 A6NED7 52 aa8.57□□□□□ -1.04
HOXC6-201ENST00000243108 H1FX-AS1Q4G0G2 97 aa8.57□□□□□ -1.04
HOXC6-201ENST00000243108 RBM12B-AS1Q9P1G2 102 aa8.56□□□□□ -1.04
HOXC6-201ENST00000243108 LCA10Q71F78 164 aa8.54□□□□□ -1.04
HOXC6-201ENST00000243108 S4R3F8 94 aa8.54□□□□□ -1.04
HOXC6-201ENST00000243108 SEC61GP60059 68 aa8.51□□□□□ -1.05
HOXC6-201ENST00000243108 CDC42SE1Q9NRR8 79 aa8.49□□□□□ -1.05
HOXC6-201ENST00000243108 A8MU10 97 aa8.47□□□□□ -1.05
HOXC6-201ENST00000243108 UQCR11O14957 56 aa8.43□□□□□ -1.06
HOXC6-201ENST00000243108 MT2AP02795 61 aa8.43□□□□□ -1.06
HOXC6-201ENST00000243108 USH2AO75445 5202 aa8.41□□□□□ -1.06
HOXC6-201ENST00000243108 MT1FP04733 61 aa8.38□□□□□ -1.07
HOXC6-201ENST00000243108 SPATA8Q6RVD6 105 aa8.38□□□□□ -1.07
HOXC6-201ENST00000243108 SSPOA2VEC9 5147 aa8.37□□□□□ -1.07
HOXC6-201ENST00000243108 MIR22HGQ0VDD5 57 aa8.34□□□□□ -1.07
HOXC6-201ENST00000243108 A0A1B0GU33 70 aa8.32□□□□□ -1.08
HOXC6-201ENST00000243108 CSAG1Q6PB30 78 aa8.32□□□□□ -1.08
HOXC6-201ENST00000243108 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
HOXC6-201ENST00000243108 KRTAP10-10P60014 251 aa8.27□□□□□ -1.09
HOXC6-201ENST00000243108 H0YAA0 97 aa8.26□□□□□ -1.09
HOXC6-201ENST00000243108 P0C880 135 aa8.2□□□□□ -1.1
HOXC6-201ENST00000243108 ADM2Q7Z4H4 148 aa8.19□□□□□ -1.1
HOXC6-201ENST00000243108 PMAIP1Q13794 54 aa8.17□□□□□ -1.1
HOXC6-201ENST00000243108 FCGBPQ9Y6R7 5405 aaPredicted RBP8.15□□□□□ -1.1
HOXC6-201ENST00000243108 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.15□□□□□ -1.11
HOXC6-201ENST00000243108 A6NN06 94 aa8.14□□□□□ -1.11
HOXC6-201ENST00000243108 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
HOXC6-201ENST00000243108 KRTAP13-4Q3LI77 160 aa8.11□□□□□ -1.11
HOXC6-201ENST00000243108 KRTAP9-7A8MTY7 169 aa8.03□□□□□ -1.12
HOXC6-201ENST00000243108 M0QZ58 72 aa8□□□□□ -1.13
HOXC6-201ENST00000243108 MACF1Q9UPN3 7388 aaKnown RBP7.96□□□□□ -1.14
HOXC6-201ENST00000243108 KRTAP19-6Q3LI70 58 aa7.95□□□□□ -1.14
HOXC6-201ENST00000243108 A0A0D9SG42 100 aa7.93□□□□□ -1.14
HOXC6-201ENST00000243108 KTN1-AS1Q86SY8 53 aa7.92□□□□□ -1.14
HOXC6-201ENST00000243108 K7ERS5 55 aa7.9□□□□□ -1.14
HOXC6-201ENST00000243108 R4GN34 69 aa7.86□□□□□ -1.15
HOXC6-201ENST00000243108 SYNE2Q8WXH0 6885 aaKnown RBP7.85□□□□□ -1.15
HOXC6-201ENST00000243108 KRTAP12-1P59990 96 aa7.81□□□□□ -1.16
HOXC6-201ENST00000243108 KRTAP12-2P59991 146 aa7.79□□□□□ -1.16
HOXC6-201ENST00000243108 CRIPTQ9P021 101 aa7.75□□□□□ -1.17
HOXC6-201ENST00000243108 LINC01554Q52M75 96 aa7.72□□□□□ -1.17
HOXC6-201ENST00000243108 SPINT4Q6UDR6 99 aa7.72□□□□□ -1.17
HOXC6-201ENST00000243108 MT1BP07438 61 aa7.68□□□□□ -1.18
HOXC6-201ENST00000243108 SPRR2GQ9BYE4 73 aa7.66□□□□□ -1.18
HOXC6-201ENST00000243108 ROMO1P60602 79 aa7.64□□□□□ -1.19
HOXC6-201ENST00000243108 PRAC1Q96KF2 57 aa7.64□□□□□ -1.19
HOXC6-201ENST00000243108 KRTAP19-8Q3LI54 63 aa7.63□□□□□ -1.19
HOXC6-201ENST00000243108 KRTAP6-3Q3LI67 103 aa7.58□□□□□ -1.2
HOXC6-201ENST00000243108 KRTAP10-5P60370 271 aa7.47□□□□□ -1.21
HOXC6-201ENST00000243108 KRTAP25-1Q3LHN0 102 aa7.44□□□□□ -1.22
HOXC6-201ENST00000243108 CAMK2N1Q7Z7J9 78 aa7.38□□□□□ -1.23
HOXC6-201ENST00000243108 C10orf95Q9H7T3 257 aa7.38□□□□□ -1.23
HOXC6-201ENST00000243108 H3BS24 57 aa7.35□□□□□ -1.23
HOXC6-201ENST00000243108 MUC12Q9UKN1 5478 aa7.35□□□□□ -1.23
HOXC6-201ENST00000243108 NEBP20929 6669 aa7.34□□□□□ -1.23
HOXC6-201ENST00000243108 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
HOXC6-201ENST00000243108 KRTAP5-9P26371 169 aa7.24□□□□□ -1.25
HOXC6-201ENST00000243108 KMT2DO14686 5537 aa7.2□□□□□ -1.26
HOXC6-201ENST00000243108 A0A0A0MQY5 61 aa7.2□□□□□ -1.26
HOXC6-201ENST00000243108 MT1XP80297 61 aa7.18□□□□□ -1.26
HOXC6-201ENST00000243108 MDN1Q9NU22 5596 aa7.13□□□□□ -1.27
HOXC6-201ENST00000243108 LOC100996750A0A140TA64 210 aa7.1□□□□□ -1.27
HOXC6-201ENST00000243108 KRTAP4-6Q9BYQ5 205 aa7.1□□□□□ -1.27
HOXC6-201ENST00000243108 TNP1P09430 55 aa7.08□□□□□ -1.28
HOXC6-201ENST00000243108 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
HOXC6-201ENST00000243108 KRTAP20-1Q3LI63 56 aa7.02□□□□□ -1.29
HOXC6-201ENST00000243108 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
HOXC6-201ENST00000243108 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
HOXC6-201ENST00000243108 KRTAP23-1A1A580 65 aa6.98□□□□□ -1.29
HOXC6-201ENST00000243108 KRTAP8-1Q8IUC2 63 aa6.93□□□□□ -1.3
HOXC6-201ENST00000243108 KRTAP4-8A0A0G2JLE6 195 aa6.92□□□□□ -1.3
HOXC6-201ENST00000243108 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
HOXC6-201ENST00000243108 SPRR2EP22531 72 aa6.89□□□□□ -1.31
HOXC6-201ENST00000243108 SPRR2BP35325 72 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms