RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 LCA10Q71F78 164 aa8.42□□□□□ -1.06
ITGA4-201ENST00000233573 KTN1-AS1Q86SY8 53 aa8.41□□□□□ -1.06
ITGA4-201ENST00000233573 KRTAP3-1Q9BYR8 98 aa8.39□□□□□ -1.07
ITGA4-201ENST00000233573 LRP2P98164 4655 aa8.38□□□□□ -1.07
ITGA4-201ENST00000233573 SPTSSBQ8NFR3 76 aa8.38□□□□□ -1.07
ITGA4-201ENST00000233573 A6NN06 94 aa8.34□□□□□ -1.07
ITGA4-201ENST00000233573 TPRXLQ17RH7 258 aa8.33□□□□□ -1.08
ITGA4-201ENST00000233573 HERC1Q15751 4861 aa8.33□□□□□ -1.08
ITGA4-201ENST00000233573 COX6B2Q6YFQ2 88 aa8.3□□□□□ -1.08
ITGA4-201ENST00000233573 RBM12B-AS1Q9P1G2 102 aa8.23□□□□□ -1.09
ITGA4-201ENST00000233573 A0A1B0GU69 56 aa8.22□□□□□ -1.09
ITGA4-201ENST00000233573 HMCN2Q8NDA2 5059 aa8.18□□□□□ -1.1
ITGA4-201ENST00000233573 KRTAP3-3Q9BYR6 98 aa8.07□□□□□ -1.12
ITGA4-201ENST00000233573 MUC17Q685J3 4493 aa8.06□□□□□ -1.12
ITGA4-201ENST00000233573 SPATA8Q6RVD6 105 aa8.04□□□□□ -1.12
ITGA4-201ENST00000233573 SEC61BP60468 96 aaKnown RBP8.03□□□□□ -1.12
ITGA4-201ENST00000233573 UQCR11O14957 56 aa8.02□□□□□ -1.13
ITGA4-201ENST00000233573 KRTAP4-1Q9BYQ7 146 aa8□□□□□ -1.13
ITGA4-201ENST00000233573 S4R3F8 94 aa7.99□□□□□ -1.13
ITGA4-201ENST00000233573 H1FX-AS1Q4G0G2 97 aa7.99□□□□□ -1.13
ITGA4-201ENST00000233573 MIR22HGQ0VDD5 57 aa7.96□□□□□ -1.13
ITGA4-201ENST00000233573 MUC2Q02817 5179 aa7.96□□□□□ -1.13
ITGA4-201ENST00000233573 A0A1B0GU33 70 aa7.88□□□□□ -1.15
ITGA4-201ENST00000233573 H0YAA0 97 aa7.87□□□□□ -1.15
ITGA4-201ENST00000233573 KRTAP10-6P60371 365 aaPredicted RBP7.87□□□□□ -1.15
ITGA4-201ENST00000233573 PRAC1Q96KF2 57 aa7.87□□□□□ -1.15
ITGA4-201ENST00000233573 UBR4Q5T4S7 5183 aa7.86□□□□□ -1.15
ITGA4-201ENST00000233573 KRTAP3-2Q9BYR7 98 aa7.86□□□□□ -1.15
ITGA4-201ENST00000233573 ADM2Q7Z4H4 148 aa7.82□□□□□ -1.16
ITGA4-201ENST00000233573 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
ITGA4-201ENST00000233573 RNF213Q63HN8 5207 aa7.79□□□□□ -1.16
ITGA4-201ENST00000233573 KRTAP19-2Q3LHN2 52 aa7.77□□□□□ -1.17
ITGA4-201ENST00000233573 CSAG1Q6PB30 78 aa7.77□□□□□ -1.17
ITGA4-201ENST00000233573 P0C880 135 aa7.74□□□□□ -1.17
ITGA4-201ENST00000233573 KRTAP13-4Q3LI77 160 aa7.71□□□□□ -1.18
ITGA4-201ENST00000233573 FLGP20930 4061 aaPredicted RBP7.65□□□□□ -1.18
ITGA4-201ENST00000233573 FAT4Q6V0I7 4981 aa7.62□□□□□ -1.19
ITGA4-201ENST00000233573 LCE2CQ5TA81 110 aa7.55□□□□□ -1.2
ITGA4-201ENST00000233573 A0A0D9SG42 100 aa7.51□□□□□ -1.21
ITGA4-201ENST00000233573 M0QZ58 72 aa7.5□□□□□ -1.21
ITGA4-201ENST00000233573 KRTAP25-1Q3LHN0 102 aa7.49□□□□□ -1.21
ITGA4-201ENST00000233573 LCE2DQ5TA82 110 aaPredicted RBP7.48□□□□□ -1.21
ITGA4-201ENST00000233573 K7ERS5 55 aa7.47□□□□□ -1.21
ITGA4-201ENST00000233573 LORP23490 312 aaPredicted RBP7.42□□□□□ -1.22
ITGA4-201ENST00000233573 KRTAP12-2P59991 146 aa7.4□□□□□ -1.22
ITGA4-201ENST00000233573 KRTAP12-1P59990 96 aa7.4□□□□□ -1.23
ITGA4-201ENST00000233573 MT1HP80294 61 aa7.39□□□□□ -1.23
ITGA4-201ENST00000233573 R4GN34 69 aa7.37□□□□□ -1.23
ITGA4-201ENST00000233573 H3BS24 57 aa7.34□□□□□ -1.23
ITGA4-201ENST00000233573 M0R2T5 61 aa7.32□□□□□ -1.24
ITGA4-201ENST00000233573 ROMO1P60602 79 aa7.31□□□□□ -1.24
ITGA4-201ENST00000233573 SPINT4Q6UDR6 99 aa7.31□□□□□ -1.24
ITGA4-201ENST00000233573 CRIPTQ9P021 101 aa7.18□□□□□ -1.26
ITGA4-201ENST00000233573 KRTAP9-8Q9BYQ0 159 aa7.12□□□□□ -1.27
ITGA4-201ENST00000233573 MT2AP02795 61 aa7.12□□□□□ -1.27
ITGA4-201ENST00000233573 MT1FP04733 61 aa7.09□□□□□ -1.27
ITGA4-201ENST00000233573 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
ITGA4-201ENST00000233573 LCE2AQ5TA79 106 aaPredicted RBP7.04□□□□□ -1.28
ITGA4-201ENST00000233573 SPRR2GQ9BYE4 73 aa7.03□□□□□ -1.28
ITGA4-201ENST00000233573 KRTAP19-1Q8IUB9 90 aa7.01□□□□□ -1.29
ITGA4-201ENST00000233573 C10orf95Q9H7T3 257 aa7□□□□□ -1.29
ITGA4-201ENST00000233573 CAMK2N1Q7Z7J9 78 aa6.92□□□□□ -1.3
ITGA4-201ENST00000233573 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
ITGA4-201ENST00000233573 KRTAP9-3Q9BYQ3 159 aa6.85□□□□□ -1.31
ITGA4-201ENST00000233573 KRTAP19-8Q3LI54 63 aa6.8□□□□□ -1.32
ITGA4-201ENST00000233573 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
ITGA4-201ENST00000233573 NDUFAF8A1L188 74 aa6.72□□□□□ -1.33
ITGA4-201ENST00000233573 MT1BP07438 61 aa6.71□□□□□ -1.34
ITGA4-201ENST00000233573 LCE2BO14633 110 aa6.69□□□□□ -1.34
ITGA4-201ENST00000233573 TNP1P09430 55 aa6.64□□□□□ -1.35
ITGA4-201ENST00000233573 USH2AO75445 5202 aa6.64□□□□□ -1.35
ITGA4-201ENST00000233573 PP632Q6XCG6 107 aa6.61□□□□□ -1.35
ITGA4-201ENST00000233573 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
ITGA4-201ENST00000233573 KRTAP10-5P60370 271 aa6.56□□□□□ -1.36
ITGA4-201ENST00000233573 MT1XP80297 61 aa6.56□□□□□ -1.36
ITGA4-201ENST00000233573 FSIP2Q5CZC0 6907 aa6.43□□□□□ -1.38
ITGA4-201ENST00000233573 SSPOA2VEC9 5147 aa6.41□□□□□ -1.38
ITGA4-201ENST00000233573 LCE3AQ5TA76 89 aa6.37□□□□□ -1.39
ITGA4-201ENST00000233573 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.39
ITGA4-201ENST00000233573 KRTAP10-7P60409 375 aaPredicted RBP6.32□□□□□ -1.4
ITGA4-201ENST00000233573 KRTAP10-12P60413 245 aa6.27□□□□□ -1.41
ITGA4-201ENST00000233573 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
ITGA4-201ENST00000233573 KRTAP8-1Q8IUC2 63 aa6.26□□□□□ -1.41
ITGA4-201ENST00000233573 KRTAP19-6Q3LI70 58 aa6.2□□□□□ -1.42
ITGA4-201ENST00000233573 KMT2DO14686 5537 aa6.19□□□□□ -1.42
ITGA4-201ENST00000233573 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
ITGA4-201ENST00000233573 A0A0A0MQY5 61 aa6.11□□□□□ -1.43
ITGA4-201ENST00000233573 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
ITGA4-201ENST00000233573 KRTAP12-3P60328 96 aa6.09□□□□□ -1.43
ITGA4-201ENST00000233573 SPRR5A0A1B0GTR4 108 aa6.08□□□□□ -1.44
ITGA4-201ENST00000233573 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
ITGA4-201ENST00000233573 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
ITGA4-201ENST00000233573 KRTAP19-5Q3LI72 72 aa5.98□□□□□ -1.45
ITGA4-201ENST00000233573 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.47
ITGA4-201ENST00000233573 MACF1Q9UPN3 7388 aaKnown RBP5.86□□□□□ -1.47
ITGA4-201ENST00000233573 KRTAP19-7Q3SYF9 63 aa5.86□□□□□ -1.47
ITGA4-201ENST00000233573 LCE3CQ5T5A8 94 aa5.73□□□□□ -1.49
ITGA4-201ENST00000233573 SYNE2Q8WXH0 6885 aaKnown RBP5.72□□□□□ -1.49
ITGA4-201ENST00000233573 MT1EP04732 61 aa5.71□□□□□ -1.5
ITGA4-201ENST00000233573 MUC12Q9UKN1 5478 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms