RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 TMEM258P61165 79 aa8.16□□□□□ -1.1
CHMP5-201ENST00000223500 S4R3F8 94 aa8.16□□□□□ -1.1
CHMP5-201ENST00000223500 MT1HP80294 61 aa8.11□□□□□ -1.11
CHMP5-201ENST00000223500 M0R2T5 61 aa8.08□□□□□ -1.12
CHMP5-201ENST00000223500 LCE2BO14633 110 aa8.08□□□□□ -1.12
CHMP5-201ENST00000223500 LCA10Q71F78 164 aa8.08□□□□□ -1.12
CHMP5-201ENST00000223500 CHKB-CPT1BH3BT56 60 aa8.07□□□□□ -1.12
CHMP5-201ENST00000223500 CSAG1Q6PB30 78 aa8.03□□□□□ -1.12
CHMP5-201ENST00000223500 COA5Q86WW8 74 aa8.03□□□□□ -1.12
CHMP5-201ENST00000223500 SPTSSBQ8NFR3 76 aa8□□□□□ -1.13
CHMP5-201ENST00000223500 LCE2AQ5TA79 106 aaPredicted RBP7.99□□□□□ -1.13
CHMP5-201ENST00000223500 SERP1Q9Y6X1 66 aa7.91□□□□□ -1.14
CHMP5-201ENST00000223500 KRTAP10-6P60371 365 aaPredicted RBP7.87□□□□□ -1.15
CHMP5-201ENST00000223500 LORP23490 312 aaPredicted RBP7.82□□□□□ -1.16
CHMP5-201ENST00000223500 H0YAA0 97 aa7.8□□□□□ -1.16
CHMP5-201ENST00000223500 KRTAP9-8Q9BYQ0 159 aa7.76□□□□□ -1.17
CHMP5-201ENST00000223500 RPS28P62857 69 aaKnown RBP7.75□□□□□ -1.17
CHMP5-201ENST00000223500 ADM2Q7Z4H4 148 aa7.75□□□□□ -1.17
CHMP5-201ENST00000223500 MT2AP02795 61 aa7.72□□□□□ -1.17
CHMP5-201ENST00000223500 SEC61GP60059 68 aa7.72□□□□□ -1.17
CHMP5-201ENST00000223500 KRTAP10-10P60014 251 aa7.69□□□□□ -1.18
CHMP5-201ENST00000223500 SMIM26A0A096LP01 95 aa7.67□□□□□ -1.18
CHMP5-201ENST00000223500 MT1FP04733 61 aa7.66□□□□□ -1.18
CHMP5-201ENST00000223500 LINC01558Q9Y6Z2 57 aa7.64□□□□□ -1.19
CHMP5-201ENST00000223500 A0A1B0GU69 56 aa7.63□□□□□ -1.19
CHMP5-201ENST00000223500 P0C880 135 aa7.62□□□□□ -1.19
CHMP5-201ENST00000223500 V9GYY9 64 aa7.62□□□□□ -1.19
CHMP5-201ENST00000223500 PRR15LQ9BU68 103 aa7.62□□□□□ -1.19
CHMP5-201ENST00000223500 CRIPTQ9P021 101 aa7.59□□□□□ -1.19
CHMP5-201ENST00000223500 Q1T7F1 81 aa7.57□□□□□ -1.2
CHMP5-201ENST00000223500 LOC100996750A0A140TA64 210 aa7.56□□□□□ -1.2
CHMP5-201ENST00000223500 KRTAP4-6Q9BYQ5 205 aa7.56□□□□□ -1.2
CHMP5-201ENST00000223500 R4GN34 69 aa7.51□□□□□ -1.21
CHMP5-201ENST00000223500 KRTAP9-3Q9BYQ3 159 aa7.5□□□□□ -1.21
CHMP5-201ENST00000223500 A0A1B0GU33 70 aa7.49□□□□□ -1.21
CHMP5-201ENST00000223500 M0QZ58 72 aa7.48□□□□□ -1.21
CHMP5-201ENST00000223500 PSPHP1O15172 72 aa7.44□□□□□ -1.22
CHMP5-201ENST00000223500 SPRR2GQ9BYE4 73 aa7.44□□□□□ -1.22
CHMP5-201ENST00000223500 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
CHMP5-201ENST00000223500 Q5VV11 94 aa7.36□□□□□ -1.23
CHMP5-201ENST00000223500 UQCR11O14957 56 aa7.36□□□□□ -1.23
CHMP5-201ENST00000223500 KRTAP13-4Q3LI77 160 aa7.35□□□□□ -1.23
CHMP5-201ENST00000223500 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
CHMP5-201ENST00000223500 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
CHMP5-201ENST00000223500 KRTAP19-8Q3LI54 63 aa7.3□□□□□ -1.24
CHMP5-201ENST00000223500 A6NED7 52 aa7.25□□□□□ -1.25
CHMP5-201ENST00000223500 KRTAP9-2Q9BYQ4 174 aa7.25□□□□□ -1.25
CHMP5-201ENST00000223500 A0A0D9SG42 100 aa7.24□□□□□ -1.25
CHMP5-201ENST00000223500 MIR22HGQ0VDD5 57 aa7.24□□□□□ -1.25
CHMP5-201ENST00000223500 A6NN06 94 aa7.22□□□□□ -1.25
CHMP5-201ENST00000223500 USH2AO75445 5202 aa7.21□□□□□ -1.26
CHMP5-201ENST00000223500 PLAC4Q8WY50 150 aa7.2□□□□□ -1.26
CHMP5-201ENST00000223500 A8MU10 97 aa7.18□□□□□ -1.26
CHMP5-201ENST00000223500 MT1BP07438 61 aa7.18□□□□□ -1.26
CHMP5-201ENST00000223500 SPINT4Q6UDR6 99 aa7.12□□□□□ -1.27
CHMP5-201ENST00000223500 KRTAP12-1P59990 96 aa7.09□□□□□ -1.27
CHMP5-201ENST00000223500 FSIP2Q5CZC0 6907 aa7.07□□□□□ -1.28
CHMP5-201ENST00000223500 CDC42SE1Q9NRR8 79 aa7.06□□□□□ -1.28
CHMP5-201ENST00000223500 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
CHMP5-201ENST00000223500 K7ERS5 55 aa7.03□□□□□ -1.28
CHMP5-201ENST00000223500 CAMK2N1Q7Z7J9 78 aa7.02□□□□□ -1.29
CHMP5-201ENST00000223500 SSPOA2VEC9 5147 aa7□□□□□ -1.29
CHMP5-201ENST00000223500 KRTAP19-6Q3LI70 58 aa6.98□□□□□ -1.29
CHMP5-201ENST00000223500 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
CHMP5-201ENST00000223500 PRO2289Q9P1D8 64 aa6.95□□□□□ -1.3
CHMP5-201ENST00000223500 BRK1Q8WUW1 75 aa6.93□□□□□ -1.3
CHMP5-201ENST00000223500 KRTAP10-5P60370 271 aa6.92□□□□□ -1.3
CHMP5-201ENST00000223500 MT1XP80297 61 aa6.89□□□□□ -1.31
CHMP5-201ENST00000223500 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
CHMP5-201ENST00000223500 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
CHMP5-201ENST00000223500 FCGBPQ9Y6R7 5405 aaPredicted RBP6.78□□□□□ -1.32
CHMP5-201ENST00000223500 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
CHMP5-201ENST00000223500 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.71□□□□□ -1.34
CHMP5-201ENST00000223500 TNP1P09430 55 aa6.63□□□□□ -1.35
CHMP5-201ENST00000223500 ROMO1P60602 79 aa6.63□□□□□ -1.35
CHMP5-201ENST00000223500 PRO0628Q9UI54 55 aa6.63□□□□□ -1.35
CHMP5-201ENST00000223500 KRTAP10-7P60409 375 aaPredicted RBP6.6□□□□□ -1.35
CHMP5-201ENST00000223500 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
CHMP5-201ENST00000223500 PMAIP1Q13794 54 aa6.56□□□□□ -1.36
CHMP5-201ENST00000223500 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
CHMP5-201ENST00000223500 MACF1Q9UPN3 7388 aaKnown RBP6.53□□□□□ -1.36
CHMP5-201ENST00000223500 LCE3BQ5TA77 95 aa6.46□□□□□ -1.38
CHMP5-201ENST00000223500 KMT2DO14686 5537 aa6.41□□□□□ -1.38
CHMP5-201ENST00000223500 KRTAP4-12Q9BQ66 201 aa6.41□□□□□ -1.38
CHMP5-201ENST00000223500 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.39
CHMP5-201ENST00000223500 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
CHMP5-201ENST00000223500 KRTAP9-9Q9BYP9 154 aa6.36□□□□□ -1.39
CHMP5-201ENST00000223500 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
CHMP5-201ENST00000223500 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.4
CHMP5-201ENST00000223500 LCE3AQ5TA76 89 aa6.34□□□□□ -1.4
CHMP5-201ENST00000223500 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
CHMP5-201ENST00000223500 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
CHMP5-201ENST00000223500 KRTAP6-3Q3LI67 103 aa6.24□□□□□ -1.41
CHMP5-201ENST00000223500 KRTAP9-7A8MTY7 169 aa6.2□□□□□ -1.42
CHMP5-201ENST00000223500 KRTAP5-9P26371 169 aa6.19□□□□□ -1.42
CHMP5-201ENST00000223500 KTN1-AS1Q86SY8 53 aa6.19□□□□□ -1.42
CHMP5-201ENST00000223500 SPRR2FQ96RM1 72 aa6.18□□□□□ -1.42
CHMP5-201ENST00000223500 KRTAP19-5Q3LI72 72 aa6.17□□□□□ -1.42
CHMP5-201ENST00000223500 KRTAP19-7Q3SYF9 63 aa6.15□□□□□ -1.43
CHMP5-201ENST00000223500 PRAC1Q96KF2 57 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms