RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 KRTAP9-7A8MTY7 169 aa7.43□□□□□ -1.22
UPK3A-201ENST00000216211 FCGBPQ9Y6R7 5405 aaPredicted RBP7.41□□□□□ -1.22
UPK3A-201ENST00000216211 LOC101927531A0A1B0GV80 90 aa7.4□□□□□ -1.22
UPK3A-201ENST00000216211 LCE2BO14633 110 aa7.4□□□□□ -1.22
UPK3A-201ENST00000216211 ATP5EP56381 51 aaPredicted RBP7.39□□□□□ -1.23
UPK3A-201ENST00000216211 KRTAP10-10P60014 251 aa7.39□□□□□ -1.23
UPK3A-201ENST00000216211 KRTAP9-3Q9BYQ3 159 aa7.37□□□□□ -1.23
UPK3A-201ENST00000216211 KRTAP19-1Q8IUB9 90 aa7.35□□□□□ -1.23
UPK3A-201ENST00000216211 SPANXA2-OT1Q8N9U9 137 aa7.35□□□□□ -1.23
UPK3A-201ENST00000216211 CYP4F30PQ9H0H9 118 aa7.35□□□□□ -1.23
UPK3A-201ENST00000216211 IGKV2-30P06310 120 aa7.34□□□□□ -1.23
UPK3A-201ENST00000216211 SPINK7P58062 85 aa7.33□□□□□ -1.24
UPK3A-201ENST00000216211 RPS28P62857 69 aaKnown RBP7.31□□□□□ -1.24
UPK3A-201ENST00000216211 SERP1Q9Y6X1 66 aa7.27□□□□□ -1.25
UPK3A-201ENST00000216211 MACF1Q9UPN3 7388 aaKnown RBP7.26□□□□□ -1.25
UPK3A-201ENST00000216211 SYNE2Q8WXH0 6885 aaKnown RBP7.25□□□□□ -1.25
UPK3A-201ENST00000216211 IGKV2D-30A0A075B6S6 120 aa7.24□□□□□ -1.25
UPK3A-201ENST00000216211 C7orf65Q6ZTY9 151 aa7.23□□□□□ -1.25
UPK3A-201ENST00000216211 KRTAP19-6Q3LI70 58 aa7.15□□□□□ -1.26
UPK3A-201ENST00000216211 DMAC1Q96GE9 116 aa7.13□□□□□ -1.27
UPK3A-201ENST00000216211 ACYP2P14621 99 aa7.11□□□□□ -1.27
UPK3A-201ENST00000216211 SMIM26A0A096LP01 95 aa7.09□□□□□ -1.27
UPK3A-201ENST00000216211 COA5Q86WW8 74 aa7.09□□□□□ -1.27
UPK3A-201ENST00000216211 H1FX-AS1Q4G0G2 97 aa7.08□□□□□ -1.28
UPK3A-201ENST00000216211 A8MUN3 132 aa7.06□□□□□ -1.28
UPK3A-201ENST00000216211 C4orf26Q17RF5 130 aa7.05□□□□□ -1.28
UPK3A-201ENST00000216211 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
UPK3A-201ENST00000216211 CHKB-CPT1BH3BT56 60 aa6.95□□□□□ -1.3
UPK3A-201ENST00000216211 Q1T7F1 81 aa6.95□□□□□ -1.3
UPK3A-201ENST00000216211 V9GYY9 64 aa6.92□□□□□ -1.3
UPK3A-201ENST00000216211 KRTAP6-3Q3LI67 103 aa6.91□□□□□ -1.3
UPK3A-201ENST00000216211 LINC01558Q9Y6Z2 57 aa6.86□□□□□ -1.31
UPK3A-201ENST00000216211 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
UPK3A-201ENST00000216211 S4R3F8 94 aa6.81□□□□□ -1.32
UPK3A-201ENST00000216211 NEBP20929 6669 aa6.78□□□□□ -1.32
UPK3A-201ENST00000216211 MT1BP07438 61 aa6.78□□□□□ -1.32
UPK3A-201ENST00000216211 A6NN06 94 aa6.76□□□□□ -1.33
UPK3A-201ENST00000216211 PSPHP1O15172 72 aa6.76□□□□□ -1.33
UPK3A-201ENST00000216211 LCA10Q71F78 164 aa6.76□□□□□ -1.33
UPK3A-201ENST00000216211 PRR15LQ9BU68 103 aa6.76□□□□□ -1.33
UPK3A-201ENST00000216211 Q5VV11 94 aa6.75□□□□□ -1.33
UPK3A-201ENST00000216211 CSAG1Q6PB30 78 aa6.75□□□□□ -1.33
UPK3A-201ENST00000216211 KRTAP3-3Q9BYR6 98 aa6.74□□□□□ -1.33
UPK3A-201ENST00000216211 MUC12Q9UKN1 5478 aa6.73□□□□□ -1.33
UPK3A-201ENST00000216211 KRTAP19-8Q3LI54 63 aa6.72□□□□□ -1.33
UPK3A-201ENST00000216211 SPRR2GQ9BYE4 73 aa6.72□□□□□ -1.33
UPK3A-201ENST00000216211 A0A1B0GU69 56 aa6.7□□□□□ -1.34
UPK3A-201ENST00000216211 SEC61GP60059 68 aa6.65□□□□□ -1.34
UPK3A-201ENST00000216211 KRTAP10-5P60370 271 aa6.65□□□□□ -1.34
UPK3A-201ENST00000216211 A6NED7 52 aa6.56□□□□□ -1.36
UPK3A-201ENST00000216211 MDN1Q9NU22 5596 aa6.52□□□□□ -1.36
UPK3A-201ENST00000216211 UQCR11O14957 56 aa6.52□□□□□ -1.37
UPK3A-201ENST00000216211 KRTAP5-9P26371 169 aa6.52□□□□□ -1.37
UPK3A-201ENST00000216211 BRK1Q8WUW1 75 aa6.52□□□□□ -1.37
UPK3A-201ENST00000216211 KRTAP3-2Q9BYR7 98 aa6.52□□□□□ -1.37
UPK3A-201ENST00000216211 CRIPTQ9P021 101 aa6.52□□□□□ -1.37
UPK3A-201ENST00000216211 H0YAA0 97 aa6.51□□□□□ -1.37
UPK3A-201ENST00000216211 KRTAP20-1Q3LI63 56 aa6.5□□□□□ -1.37
UPK3A-201ENST00000216211 KMT2DO14686 5537 aa6.5□□□□□ -1.37
UPK3A-201ENST00000216211 A0A1B0GU33 70 aa6.49□□□□□ -1.37
UPK3A-201ENST00000216211 CDC42SE1Q9NRR8 79 aa6.49□□□□□ -1.37
UPK3A-201ENST00000216211 SPATA8Q6RVD6 105 aa6.47□□□□□ -1.37
UPK3A-201ENST00000216211 ADM2Q7Z4H4 148 aa6.47□□□□□ -1.37
UPK3A-201ENST00000216211 MIR22HGQ0VDD5 57 aa6.44□□□□□ -1.38
UPK3A-201ENST00000216211 PRO0628Q9UI54 55 aa6.44□□□□□ -1.38
UPK3A-201ENST00000216211 P0C880 135 aa6.43□□□□□ -1.38
UPK3A-201ENST00000216211 A8MU10 97 aa6.41□□□□□ -1.38
UPK3A-201ENST00000216211 KRTAP13-4Q3LI77 160 aa6.32□□□□□ -1.4
UPK3A-201ENST00000216211 M0QZ58 72 aa6.31□□□□□ -1.4
UPK3A-201ENST00000216211 PRO2289Q9P1D8 64 aa6.31□□□□□ -1.4
UPK3A-201ENST00000216211 MT1XP80297 61 aa6.3□□□□□ -1.4
UPK3A-201ENST00000216211 SPRR2FQ96RM1 72 aa6.3□□□□□ -1.4
UPK3A-201ENST00000216211 KRTAP2-3P0C7H8 128 aa6.27□□□□□ -1.41
UPK3A-201ENST00000216211 PLAC4Q8WY50 150 aa6.27□□□□□ -1.41
UPK3A-201ENST00000216211 KRTAP2-4Q9BYR9 128 aa6.27□□□□□ -1.41
UPK3A-201ENST00000216211 SPRR2EP22531 72 aa6.26□□□□□ -1.41
UPK3A-201ENST00000216211 SPRR2BP35325 72 aa6.26□□□□□ -1.41
UPK3A-201ENST00000216211 SPRR2AP35326 72 aa6.26□□□□□ -1.41
UPK3A-201ENST00000216211 R4GN34 69 aa6.22□□□□□ -1.41
UPK3A-201ENST00000216211 KRTAP8-1Q8IUC2 63 aa6.21□□□□□ -1.42
UPK3A-201ENST00000216211 A0A0D9SG42 100 aa6.18□□□□□ -1.42
UPK3A-201ENST00000216211 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
UPK3A-201ENST00000216211 KRTAP12-2P59991 146 aa6.17□□□□□ -1.42
UPK3A-201ENST00000216211 K7ERS5 55 aa6.14□□□□□ -1.43
UPK3A-201ENST00000216211 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
UPK3A-201ENST00000216211 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
UPK3A-201ENST00000216211 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
UPK3A-201ENST00000216211 KRTAP12-1P59990 96 aa6.1□□□□□ -1.43
UPK3A-201ENST00000216211 LINC01554Q52M75 96 aa6.1□□□□□ -1.43
UPK3A-201ENST00000216211 KRTAP2-2Q9BYT5 123 aa6.06□□□□□ -1.44
UPK3A-201ENST00000216211 KRTAP2-1Q9BYU5 128 aa6.06□□□□□ -1.44
UPK3A-201ENST00000216211 SPRR2DP22532 72 aa6.05□□□□□ -1.44
UPK3A-201ENST00000216211 SPINT4Q6UDR6 99 aa6.04□□□□□ -1.44
UPK3A-201ENST00000216211 SVIPQ8NHG7 77 aa6.04□□□□□ -1.44
UPK3A-201ENST00000216211 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
UPK3A-201ENST00000216211 KRTAP10-12P60413 245 aa5.98□□□□□ -1.45
UPK3A-201ENST00000216211 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
UPK3A-201ENST00000216211 ROMO1P60602 79 aa5.91□□□□□ -1.46
UPK3A-201ENST00000216211 LCE3BQ5TA77 95 aa5.9□□□□□ -1.46
UPK3A-201ENST00000216211 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms