RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 PRO0628Q9UI54 55 aa9.98□□□□□ -0.81
RHBDD3-201ENST00000216085 SPANXA2-OT1Q8N9U9 137 aa9.91□□□□□ -0.82
RHBDD3-201ENST00000216085 KRTAP3-1Q9BYR8 98 aa9.87□□□□□ -0.83
RHBDD3-201ENST00000216085 A8MUN3 132 aa9.86□□□□□ -0.83
RHBDD3-201ENST00000216085 KRTAP10-6P60371 365 aaPredicted RBP9.85□□□□□ -0.83
RHBDD3-201ENST00000216085 S4R3F8 94 aa9.83□□□□□ -0.84
RHBDD3-201ENST00000216085 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
RHBDD3-201ENST00000216085 LCA10Q71F78 164 aa9.73□□□□□ -0.85
RHBDD3-201ENST00000216085 DMAC1Q96GE9 116 aa9.71□□□□□ -0.85
RHBDD3-201ENST00000216085 CSAG1Q6PB30 78 aa9.7□□□□□ -0.86
RHBDD3-201ENST00000216085 BRK1Q8WUW1 75 aa9.67□□□□□ -0.86
RHBDD3-201ENST00000216085 KRTAP9-8Q9BYQ0 159 aa9.63□□□□□ -0.87
RHBDD3-201ENST00000216085 ACYP2P14621 99 aa9.62□□□□□ -0.87
RHBDD3-201ENST00000216085 Q1T7F1 81 aa9.6□□□□□ -0.87
RHBDD3-201ENST00000216085 COA5Q86WW8 74 aa9.58□□□□□ -0.88
RHBDD3-201ENST00000216085 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
RHBDD3-201ENST00000216085 MT2AP02795 61 aa9.57□□□□□ -0.88
RHBDD3-201ENST00000216085 V9GYY9 64 aa9.55□□□□□ -0.88
RHBDD3-201ENST00000216085 KRTAP10-10P60014 251 aa9.53□□□□□ -0.88
RHBDD3-201ENST00000216085 CHKB-CPT1BH3BT56 60 aa9.49□□□□□ -0.89
RHBDD3-201ENST00000216085 MT1FP04733 61 aa9.49□□□□□ -0.89
RHBDD3-201ENST00000216085 LCE2DQ5TA82 110 aaPredicted RBP9.47□□□□□ -0.89
RHBDD3-201ENST00000216085 SPTSSBQ8NFR3 76 aa9.46□□□□□ -0.9
RHBDD3-201ENST00000216085 KRTAP9-2Q9BYQ4 174 aa9.42□□□□□ -0.9
RHBDD3-201ENST00000216085 SEC61GP60059 68 aa9.4□□□□□ -0.9
RHBDD3-201ENST00000216085 H0YAA0 97 aa9.38□□□□□ -0.91
RHBDD3-201ENST00000216085 PMAIP1Q13794 54 aa9.37□□□□□ -0.91
RHBDD3-201ENST00000216085 PSPHP1O15172 72 aa9.31□□□□□ -0.92
RHBDD3-201ENST00000216085 KRTAP9-3Q9BYQ3 159 aa9.31□□□□□ -0.92
RHBDD3-201ENST00000216085 ADM2Q7Z4H4 148 aa9.29□□□□□ -0.92
RHBDD3-201ENST00000216085 Q5VV11 94 aa9.27□□□□□ -0.93
RHBDD3-201ENST00000216085 LINC01558Q9Y6Z2 57 aa9.27□□□□□ -0.93
RHBDD3-201ENST00000216085 CRIPTQ9P021 101 aa9.24□□□□□ -0.93
RHBDD3-201ENST00000216085 PRR15LQ9BU68 103 aa9.19□□□□□ -0.94
RHBDD3-201ENST00000216085 LCE2BO14633 110 aa9.13□□□□□ -0.95
RHBDD3-201ENST00000216085 KTN1-AS1Q86SY8 53 aa9.11□□□□□ -0.95
RHBDD3-201ENST00000216085 SPRR2GQ9BYE4 73 aa9.11□□□□□ -0.95
RHBDD3-201ENST00000216085 P0C880 135 aa9.09□□□□□ -0.95
RHBDD3-201ENST00000216085 A0A1B0GU69 56 aa9.09□□□□□ -0.95
RHBDD3-201ENST00000216085 KRTAP19-1Q8IUB9 90 aa9.09□□□□□ -0.95
RHBDD3-201ENST00000216085 KRTAP3-2Q9BYR7 98 aa9.08□□□□□ -0.96
RHBDD3-201ENST00000216085 FSIP2Q5CZC0 6907 aa9.07□□□□□ -0.96
RHBDD3-201ENST00000216085 CDC42SE1Q9NRR8 79 aa9.07□□□□□ -0.96
RHBDD3-201ENST00000216085 R4GN34 69 aa9.06□□□□□ -0.96
RHBDD3-201ENST00000216085 A6NED7 52 aa9.04□□□□□ -0.96
RHBDD3-201ENST00000216085 USH2AO75445 5202 aa9.03□□□□□ -0.96
RHBDD3-201ENST00000216085 A8MU10 97 aa9.03□□□□□ -0.96
RHBDD3-201ENST00000216085 A6NN06 94 aa9.01□□□□□ -0.97
RHBDD3-201ENST00000216085 CRCT1Q9UGL9 99 aa9.01□□□□□ -0.97
RHBDD3-201ENST00000216085 M0QZ58 72 aa8.99□□□□□ -0.97
RHBDD3-201ENST00000216085 KRTAP19-8Q3LI54 63 aa8.94□□□□□ -0.98
RHBDD3-201ENST00000216085 KRTAP9-6A0A140TA67 174 aa8.94□□□□□ -0.98
RHBDD3-201ENST00000216085 UQCR11O14957 56 aa8.85□□□□□ -0.99
RHBDD3-201ENST00000216085 SSPOA2VEC9 5147 aa8.84□□□□□ -0.99
RHBDD3-201ENST00000216085 MT1BP07438 61 aa8.84□□□□□ -1
RHBDD3-201ENST00000216085 LINC01554Q52M75 96 aa8.83□□□□□ -1
RHBDD3-201ENST00000216085 A0A1B0GU33 70 aa8.78□□□□□ -1
RHBDD3-201ENST00000216085 KRTAP19-6Q3LI70 58 aa8.77□□□□□ -1.01
RHBDD3-201ENST00000216085 PLAC4Q8WY50 150 aa8.76□□□□□ -1.01
RHBDD3-201ENST00000216085 MIR22HGQ0VDD5 57 aa8.74□□□□□ -1.01
RHBDD3-201ENST00000216085 SPATA8Q6RVD6 105 aa8.74□□□□□ -1.01
RHBDD3-201ENST00000216085 KRTAP13-4Q3LI77 160 aa8.68□□□□□ -1.02
RHBDD3-201ENST00000216085 FCGBPQ9Y6R7 5405 aaPredicted RBP8.58□□□□□ -1.04
RHBDD3-201ENST00000216085 PRO2289Q9P1D8 64 aa8.57□□□□□ -1.04
RHBDD3-201ENST00000216085 A0A0D9SG42 100 aa8.56□□□□□ -1.04
RHBDD3-201ENST00000216085 KRTAP10-5P60370 271 aa8.56□□□□□ -1.04
RHBDD3-201ENST00000216085 PRAC1Q96KF2 57 aa8.47□□□□□ -1.05
RHBDD3-201ENST00000216085 MT1XP80297 61 aa8.43□□□□□ -1.06
RHBDD3-201ENST00000216085 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
RHBDD3-201ENST00000216085 SPINT4Q6UDR6 99 aa8.43□□□□□ -1.06
RHBDD3-201ENST00000216085 K7ERS5 55 aa8.37□□□□□ -1.07
RHBDD3-201ENST00000216085 KRTAP12-1P59990 96 aa8.36□□□□□ -1.07
RHBDD3-201ENST00000216085 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.35□□□□□ -1.07
RHBDD3-201ENST00000216085 KRTAP12-2P59991 146 aa8.3□□□□□ -1.08
RHBDD3-201ENST00000216085 MACF1Q9UPN3 7388 aaKnown RBP8.28□□□□□ -1.08
RHBDD3-201ENST00000216085 KRTAP9-7A8MTY7 169 aa8.1□□□□□ -1.11
RHBDD3-201ENST00000216085 SYNE2Q8WXH0 6885 aaKnown RBP8.09□□□□□ -1.11
RHBDD3-201ENST00000216085 KRTAP25-1Q3LHN0 102 aa8.07□□□□□ -1.12
RHBDD3-201ENST00000216085 H3BS24 57 aa8.05□□□□□ -1.12
RHBDD3-201ENST00000216085 KRTAP10-7P60409 375 aaPredicted RBP8.05□□□□□ -1.12
RHBDD3-201ENST00000216085 KRTAP10-12P60413 245 aa8.03□□□□□ -1.12
RHBDD3-201ENST00000216085 ROMO1P60602 79 aa8.01□□□□□ -1.13
RHBDD3-201ENST00000216085 KRTAP6-3Q3LI67 103 aa7.99□□□□□ -1.13
RHBDD3-201ENST00000216085 KRTAP8-1Q8IUC2 63 aa7.93□□□□□ -1.14
RHBDD3-201ENST00000216085 C10orf95Q9H7T3 257 aa7.92□□□□□ -1.14
RHBDD3-201ENST00000216085 TNP1P09430 55 aa7.91□□□□□ -1.14
RHBDD3-201ENST00000216085 KMT2DO14686 5537 aa7.89□□□□□ -1.15
RHBDD3-201ENST00000216085 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
RHBDD3-201ENST00000216085 KRTAP4-8Q9BYQ9 185 aa7.87□□□□□ -1.15
RHBDD3-201ENST00000216085 KRTAP5-9P26371 169 aa7.84□□□□□ -1.15
RHBDD3-201ENST00000216085 SPRR2FQ96RM1 72 aa7.77□□□□□ -1.17
RHBDD3-201ENST00000216085 MUC12Q9UKN1 5478 aa7.63□□□□□ -1.19
RHBDD3-201ENST00000216085 LCE3AQ5TA76 89 aa7.6□□□□□ -1.19
RHBDD3-201ENST00000216085 NEBP20929 6669 aa7.53□□□□□ -1.2
RHBDD3-201ENST00000216085 MDN1Q9NU22 5596 aa7.53□□□□□ -1.2
RHBDD3-201ENST00000216085 SPRR2EP22531 72 aa7.53□□□□□ -1.2
RHBDD3-201ENST00000216085 SPRR2BP35325 72 aa7.53□□□□□ -1.2
RHBDD3-201ENST00000216085 SPRR2AP35326 72 aa7.53□□□□□ -1.2
RHBDD3-201ENST00000216085 KRTAP19-7Q3SYF9 63 aa7.51□□□□□ -1.21
RHBDD3-201ENST00000216085 KRTAP19-5Q3LI72 72 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms