RNA–Protein interactions for RNA: ENST00000214869.6

TMED1-201, Transcript of transmembrane p24 trafficking protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED1, Length 1,340 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-201ENST00000214869 RPS28P62857 69 aaKnown RBP7.78□□□□□ -1.16
TMED1-201ENST00000214869 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
TMED1-201ENST00000214869 S4R3F8 94 aa7.74□□□□□ -1.17
TMED1-201ENST00000214869 CHKB-CPT1BH3BT56 60 aa7.72□□□□□ -1.17
TMED1-201ENST00000214869 LCA10Q71F78 164 aa7.71□□□□□ -1.18
TMED1-201ENST00000214869 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
TMED1-201ENST00000214869 KRTAP9-6A0A140TA67 174 aa7.68□□□□□ -1.18
TMED1-201ENST00000214869 LCE2AQ5TA79 106 aaPredicted RBP7.68□□□□□ -1.18
TMED1-201ENST00000214869 SPTSSBQ8NFR3 76 aa7.66□□□□□ -1.18
TMED1-201ENST00000214869 CSAG1Q6PB30 78 aa7.6□□□□□ -1.19
TMED1-201ENST00000214869 SMIM26A0A096LP01 95 aa7.59□□□□□ -1.19
TMED1-201ENST00000214869 MT1HP80294 61 aa7.59□□□□□ -1.19
TMED1-201ENST00000214869 Q1T7F1 81 aa7.49□□□□□ -1.21
TMED1-201ENST00000214869 LINC01558Q9Y6Z2 57 aa7.49□□□□□ -1.21
TMED1-201ENST00000214869 H0YAA0 97 aa7.48□□□□□ -1.21
TMED1-201ENST00000214869 V9GYY9 64 aa7.48□□□□□ -1.21
TMED1-201ENST00000214869 M0R2T5 61 aa7.44□□□□□ -1.22
TMED1-201ENST00000214869 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.22
TMED1-201ENST00000214869 SEC61GP60059 68 aa7.38□□□□□ -1.23
TMED1-201ENST00000214869 A0A1B0GU69 56 aa7.37□□□□□ -1.23
TMED1-201ENST00000214869 KRTAP10-6P60371 365 aaPredicted RBP7.36□□□□□ -1.23
TMED1-201ENST00000214869 ADM2Q7Z4H4 148 aa7.36□□□□□ -1.23
TMED1-201ENST00000214869 PRR15LQ9BU68 103 aa7.36□□□□□ -1.23
TMED1-201ENST00000214869 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
TMED1-201ENST00000214869 KRTAP9-8Q9BYQ0 159 aa7.31□□□□□ -1.24
TMED1-201ENST00000214869 P0C880 135 aa7.3□□□□□ -1.24
TMED1-201ENST00000214869 PSPHP1O15172 72 aa7.28□□□□□ -1.24
TMED1-201ENST00000214869 CRCT1Q9UGL9 99 aa7.28□□□□□ -1.24
TMED1-201ENST00000214869 Q5VV11 94 aa7.27□□□□□ -1.24
TMED1-201ENST00000214869 MT2AP02795 61 aa7.27□□□□□ -1.25
TMED1-201ENST00000214869 LCE2DQ5TA82 110 aaPredicted RBP7.27□□□□□ -1.25
TMED1-201ENST00000214869 FSIP2Q5CZC0 6907 aa7.25□□□□□ -1.25
TMED1-201ENST00000214869 A0A1B0GU33 70 aa7.22□□□□□ -1.25
TMED1-201ENST00000214869 MT1FP04733 61 aa7.21□□□□□ -1.26
TMED1-201ENST00000214869 CRIPTQ9P021 101 aa7.21□□□□□ -1.26
TMED1-201ENST00000214869 KRTAP10-10P60014 251 aa7.17□□□□□ -1.26
TMED1-201ENST00000214869 M0QZ58 72 aa7.16□□□□□ -1.26
TMED1-201ENST00000214869 UQCR11O14957 56 aa7.14□□□□□ -1.27
TMED1-201ENST00000214869 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
TMED1-201ENST00000214869 R4GN34 69 aa7.1□□□□□ -1.27
TMED1-201ENST00000214869 SPRR2GQ9BYE4 73 aa7.08□□□□□ -1.28
TMED1-201ENST00000214869 A6NED7 52 aa7.07□□□□□ -1.28
TMED1-201ENST00000214869 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
TMED1-201ENST00000214869 SPATA8Q6RVD6 105 aa7.05□□□□□ -1.28
TMED1-201ENST00000214869 KRTAP19-1Q8IUB9 90 aa7.05□□□□□ -1.28
TMED1-201ENST00000214869 MIR22HGQ0VDD5 57 aa7.03□□□□□ -1.28
TMED1-201ENST00000214869 CDC42SE1Q9NRR8 79 aa6.98□□□□□ -1.29
TMED1-201ENST00000214869 PRO0628Q9UI54 55 aa6.96□□□□□ -1.3
TMED1-201ENST00000214869 A6NN06 94 aa6.94□□□□□ -1.3
TMED1-201ENST00000214869 A8MU10 97 aa6.94□□□□□ -1.3
TMED1-201ENST00000214869 KRTAP19-8Q3LI54 63 aa6.94□□□□□ -1.3
TMED1-201ENST00000214869 SVIPQ8NHG7 77 aa6.93□□□□□ -1.3
TMED1-201ENST00000214869 A0A0D9SG42 100 aa6.91□□□□□ -1.3
TMED1-201ENST00000214869 LINC01554Q52M75 96 aa6.91□□□□□ -1.3
TMED1-201ENST00000214869 USH2AO75445 5202 aa6.9□□□□□ -1.3
TMED1-201ENST00000214869 BRK1Q8WUW1 75 aa6.87□□□□□ -1.31
TMED1-201ENST00000214869 KRTAP9-7A8MTY7 169 aa6.86□□□□□ -1.31
TMED1-201ENST00000214869 LCE2BO14633 110 aa6.86□□□□□ -1.31
TMED1-201ENST00000214869 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
TMED1-201ENST00000214869 SSPOA2VEC9 5147 aa6.84□□□□□ -1.31
TMED1-201ENST00000214869 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.81□□□□□ -1.32
TMED1-201ENST00000214869 MT1BP07438 61 aa6.81□□□□□ -1.32
TMED1-201ENST00000214869 KRTAP12-2P59991 146 aa6.79□□□□□ -1.32
TMED1-201ENST00000214869 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
TMED1-201ENST00000214869 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
TMED1-201ENST00000214869 K7ERS5 55 aa6.75□□□□□ -1.33
TMED1-201ENST00000214869 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
TMED1-201ENST00000214869 FCGBPQ9Y6R7 5405 aaPredicted RBP6.62□□□□□ -1.35
TMED1-201ENST00000214869 PMAIP1Q13794 54 aa6.57□□□□□ -1.36
TMED1-201ENST00000214869 MT1XP80297 61 aa6.55□□□□□ -1.36
TMED1-201ENST00000214869 KRTAP10-5P60370 271 aa6.53□□□□□ -1.36
TMED1-201ENST00000214869 KRTAP19-6Q3LI70 58 aa6.52□□□□□ -1.37
TMED1-201ENST00000214869 PRO2289Q9P1D8 64 aa6.5□□□□□ -1.37
TMED1-201ENST00000214869 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
TMED1-201ENST00000214869 ROMO1P60602 79 aa6.47□□□□□ -1.37
TMED1-201ENST00000214869 MACF1Q9UPN3 7388 aaKnown RBP6.43□□□□□ -1.38
TMED1-201ENST00000214869 SYNE2Q8WXH0 6885 aaKnown RBP6.39□□□□□ -1.39
TMED1-201ENST00000214869 KTN1-AS1Q86SY8 53 aa6.38□□□□□ -1.39
TMED1-201ENST00000214869 KRTAP25-1Q3LHN0 102 aa6.33□□□□□ -1.4
TMED1-201ENST00000214869 TNP1P09430 55 aa6.31□□□□□ -1.4
TMED1-201ENST00000214869 KRTAP10-7P60409 375 aaPredicted RBP6.25□□□□□ -1.41
TMED1-201ENST00000214869 KRTAP10-12P60413 245 aa6.25□□□□□ -1.41
TMED1-201ENST00000214869 KRTAP6-3Q3LI67 103 aa6.19□□□□□ -1.42
TMED1-201ENST00000214869 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
TMED1-201ENST00000214869 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
TMED1-201ENST00000214869 PRAC1Q96KF2 57 aa6.08□□□□□ -1.44
TMED1-201ENST00000214869 NEBP20929 6669 aa6.07□□□□□ -1.44
TMED1-201ENST00000214869 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
TMED1-201ENST00000214869 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
TMED1-201ENST00000214869 KRTAP4-8A0A0G2JLE6 195 aa6.02□□□□□ -1.45
TMED1-201ENST00000214869 KRTAP4-8Q9BYQ9 185 aa6.02□□□□□ -1.45
TMED1-201ENST00000214869 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
TMED1-201ENST00000214869 KMT2DO14686 5537 aa5.97□□□□□ -1.45
TMED1-201ENST00000214869 KRTAP20-1Q3LI63 56 aa5.97□□□□□ -1.45
TMED1-201ENST00000214869 KRTAP5-9P26371 169 aa5.86□□□□□ -1.47
TMED1-201ENST00000214869 KRTAP19-5Q3LI72 72 aa5.86□□□□□ -1.47
TMED1-201ENST00000214869 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
TMED1-201ENST00000214869 KRTAP19-7Q3SYF9 63 aa5.85□□□□□ -1.47
TMED1-201ENST00000214869 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
TMED1-201ENST00000214869 MT1EP04732 61 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms