RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 A6NED7 52 aa9.34□□□□□ -0.91
CTSA-201ENST00000191018 KRTAP3-3Q9BYR6 98 aa9.34□□□□□ -0.91
CTSA-201ENST00000191018 H1FX-AS1Q4G0G2 97 aa9.32□□□□□ -0.92
CTSA-201ENST00000191018 LCA10Q71F78 164 aa9.32□□□□□ -0.92
CTSA-201ENST00000191018 RBM12B-AS1Q9P1G2 102 aa9.32□□□□□ -0.92
CTSA-201ENST00000191018 S4R3F8 94 aa9.3□□□□□ -0.92
CTSA-201ENST00000191018 MUC17Q685J3 4493 aa9.28□□□□□ -0.92
CTSA-201ENST00000191018 KRTAP4-1Q9BYQ7 146 aa9.28□□□□□ -0.92
CTSA-201ENST00000191018 A8MU10 97 aa9.27□□□□□ -0.93
CTSA-201ENST00000191018 SEC61GP60059 68 aa9.27□□□□□ -0.93
CTSA-201ENST00000191018 CDC42SE1Q9NRR8 79 aa9.25□□□□□ -0.93
CTSA-201ENST00000191018 HERC1Q15751 4861 aa9.25□□□□□ -0.93
CTSA-201ENST00000191018 HMCN2Q8NDA2 5059 aa9.2□□□□□ -0.94
CTSA-201ENST00000191018 UQCR11O14957 56 aa9.19□□□□□ -0.94
CTSA-201ENST00000191018 SPATA8Q6RVD6 105 aa9.13□□□□□ -0.95
CTSA-201ENST00000191018 SVIPQ8NHG7 77 aa9.11□□□□□ -0.95
CTSA-201ENST00000191018 MIR22HGQ0VDD5 57 aa9.1□□□□□ -0.95
CTSA-201ENST00000191018 KRTAP19-2Q3LHN2 52 aa9.1□□□□□ -0.95
CTSA-201ENST00000191018 A0A1B0GU33 70 aa9.07□□□□□ -0.96
CTSA-201ENST00000191018 KRTAP10-6P60371 365 aaPredicted RBP9.07□□□□□ -0.96
CTSA-201ENST00000191018 CSAG1Q6PB30 78 aa9.06□□□□□ -0.96
CTSA-201ENST00000191018 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
CTSA-201ENST00000191018 H0YAA0 97 aa9□□□□□ -0.97
CTSA-201ENST00000191018 MUC2Q02817 5179 aa8.96□□□□□ -0.98
CTSA-201ENST00000191018 P0C880 135 aa8.94□□□□□ -0.98
CTSA-201ENST00000191018 ADM2Q7Z4H4 148 aa8.93□□□□□ -0.98
CTSA-201ENST00000191018 PMAIP1Q13794 54 aa8.91□□□□□ -0.98
CTSA-201ENST00000191018 A6NN06 94 aa8.87□□□□□ -0.99
CTSA-201ENST00000191018 KRTAP13-4Q3LI77 160 aa8.85□□□□□ -0.99
CTSA-201ENST00000191018 FLGP20930 4061 aaPredicted RBP8.81□□□□□ -1
CTSA-201ENST00000191018 LCE2CQ5TA81 110 aa8.77□□□□□ -1.01
CTSA-201ENST00000191018 UBR4Q5T4S7 5183 aa8.74□□□□□ -1.01
CTSA-201ENST00000191018 RNF213Q63HN8 5207 aa8.72□□□□□ -1.01
CTSA-201ENST00000191018 M0QZ58 72 aa8.7□□□□□ -1.02
CTSA-201ENST00000191018 A0A0D9SG42 100 aa8.66□□□□□ -1.02
CTSA-201ENST00000191018 KTN1-AS1Q86SY8 53 aa8.63□□□□□ -1.03
CTSA-201ENST00000191018 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
CTSA-201ENST00000191018 K7ERS5 55 aa8.6□□□□□ -1.03
CTSA-201ENST00000191018 FAT4Q6V0I7 4981 aa8.58□□□□□ -1.04
CTSA-201ENST00000191018 R4GN34 69 aa8.58□□□□□ -1.04
CTSA-201ENST00000191018 MT1HP80294 61 aa8.55□□□□□ -1.04
CTSA-201ENST00000191018 KRTAP12-1P59990 96 aa8.51□□□□□ -1.05
CTSA-201ENST00000191018 KRTAP12-2P59991 146 aa8.51□□□□□ -1.05
CTSA-201ENST00000191018 M0R2T5 61 aa8.43□□□□□ -1.06
CTSA-201ENST00000191018 LINC01554Q52M75 96 aa8.43□□□□□ -1.06
CTSA-201ENST00000191018 SPINT4Q6UDR6 99 aa8.43□□□□□ -1.06
CTSA-201ENST00000191018 CRIPTQ9P021 101 aa8.42□□□□□ -1.06
CTSA-201ENST00000191018 PRAC1Q96KF2 57 aa8.35□□□□□ -1.07
CTSA-201ENST00000191018 ROMO1P60602 79 aa8.32□□□□□ -1.08
CTSA-201ENST00000191018 KRTAP9-8Q9BYQ0 159 aa8.29□□□□□ -1.08
CTSA-201ENST00000191018 MT2AP02795 61 aa8.27□□□□□ -1.09
CTSA-201ENST00000191018 MT1FP04733 61 aa8.23□□□□□ -1.09
CTSA-201ENST00000191018 SPRR2GQ9BYE4 73 aa8.23□□□□□ -1.09
CTSA-201ENST00000191018 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
CTSA-201ENST00000191018 KRTAP10-10P60014 251 aa8.18□□□□□ -1.1
CTSA-201ENST00000191018 KRTAP25-1Q3LHN0 102 aa8.1□□□□□ -1.11
CTSA-201ENST00000191018 LCE2AQ5TA79 106 aaPredicted RBP8.06□□□□□ -1.12
CTSA-201ENST00000191018 C10orf95Q9H7T3 257 aa8.05□□□□□ -1.12
CTSA-201ENST00000191018 CAMK2N1Q7Z7J9 78 aa8.04□□□□□ -1.12
CTSA-201ENST00000191018 KRTAP19-8Q3LI54 63 aa7.98□□□□□ -1.13
CTSA-201ENST00000191018 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
CTSA-201ENST00000191018 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
CTSA-201ENST00000191018 MT1BP07438 61 aa7.86□□□□□ -1.15
CTSA-201ENST00000191018 LCE2BO14633 110 aa7.72□□□□□ -1.17
CTSA-201ENST00000191018 TNP1P09430 55 aa7.72□□□□□ -1.17
CTSA-201ENST00000191018 MT1XP80297 61 aa7.66□□□□□ -1.18
CTSA-201ENST00000191018 KRTAP10-5P60370 271 aa7.65□□□□□ -1.18
CTSA-201ENST00000191018 PP632Q6XCG6 107 aa7.62□□□□□ -1.19
CTSA-201ENST00000191018 KRTAP23-1A1A580 65 aa7.58□□□□□ -1.2
CTSA-201ENST00000191018 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
CTSA-201ENST00000191018 USH2AO75445 5202 aa7.44□□□□□ -1.22
CTSA-201ENST00000191018 LCE3AQ5TA76 89 aa7.38□□□□□ -1.23
CTSA-201ENST00000191018 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
CTSA-201ENST00000191018 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
CTSA-201ENST00000191018 KRTAP8-1Q8IUC2 63 aa7.26□□□□□ -1.25
CTSA-201ENST00000191018 KRTAP15-1Q3LI76 137 aa7.25□□□□□ -1.25
CTSA-201ENST00000191018 SSPOA2VEC9 5147 aa7.21□□□□□ -1.26
CTSA-201ENST00000191018 LCE2DQ5TA82 110 aaPredicted RBP7.2□□□□□ -1.26
CTSA-201ENST00000191018 KRTAP19-6Q3LI70 58 aa7.17□□□□□ -1.26
CTSA-201ENST00000191018 FSIP2Q5CZC0 6907 aa7.07□□□□□ -1.28
CTSA-201ENST00000191018 KRTAP12-3P60328 96 aa7.07□□□□□ -1.28
CTSA-201ENST00000191018 KRTAP4-8A0A0G2JLE6 195 aa7.02□□□□□ -1.29
CTSA-201ENST00000191018 KRTAP4-8Q9BYQ9 185 aa7.02□□□□□ -1.29
CTSA-201ENST00000191018 KRTAP9-2Q9BYQ4 174 aa6.98□□□□□ -1.29
CTSA-201ENST00000191018 KMT2DO14686 5537 aa6.97□□□□□ -1.29
CTSA-201ENST00000191018 KRTAP19-5Q3LI72 72 aa6.96□□□□□ -1.3
CTSA-201ENST00000191018 SPRR5A0A1B0GTR4 108 aa6.91□□□□□ -1.3
CTSA-201ENST00000191018 KRTAP19-7Q3SYF9 63 aa6.84□□□□□ -1.31
CTSA-201ENST00000191018 FCGBPQ9Y6R7 5405 aaPredicted RBP6.81□□□□□ -1.32
CTSA-201ENST00000191018 NDUFAF8A1L188 74 aa6.75□□□□□ -1.33
CTSA-201ENST00000191018 LUZP6Q538Z0 58 aa6.7□□□□□ -1.34
CTSA-201ENST00000191018 MT1EP04732 61 aa6.68□□□□□ -1.34
CTSA-201ENST00000191018 CRCT1Q9UGL9 99 aa6.66□□□□□ -1.34
CTSA-201ENST00000191018 LCE3CQ5T5A8 94 aa6.62□□□□□ -1.35
CTSA-201ENST00000191018 MT1LQ93083 61 aa6.59□□□□□ -1.35
CTSA-201ENST00000191018 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
CTSA-201ENST00000191018 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
CTSA-201ENST00000191018 MACF1Q9UPN3 7388 aaKnown RBP6.48□□□□□ -1.37
CTSA-201ENST00000191018 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
CTSA-201ENST00000191018 KRTAP19-3Q7Z4W3 81 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms