RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ACYP2P14621 99 aa10.5□□□□□ -0.73
TNFRSF1A-201ENST00000162749 RPL37P61927 97 aaKnown RBP10.49□□□□□ -0.73
TNFRSF1A-201ENST00000162749 RBM12B-AS1Q9P1G2 102 aa10.49□□□□□ -0.73
TNFRSF1A-201ENST00000162749 LINC01558Q9Y6Z2 57 aa10.48□□□□□ -0.73
TNFRSF1A-201ENST00000162749 C7orf65Q6ZTY9 151 aa10.46□□□□□ -0.74
TNFRSF1A-201ENST00000162749 HERC1Q15751 4861 aa10.41□□□□□ -0.74
TNFRSF1A-201ENST00000162749 SPINK7P58062 85 aa10.37□□□□□ -0.75
TNFRSF1A-201ENST00000162749 HMCN2Q8NDA2 5059 aa10.22□□□□□ -0.77
TNFRSF1A-201ENST00000162749 A0A1B0GU69 56 aa10.14□□□□□ -0.79
TNFRSF1A-201ENST00000162749 KRTAP3-1Q9BYR8 98 aa10.14□□□□□ -0.79
TNFRSF1A-201ENST00000162749 SEC61BP60468 96 aaKnown RBP10.11□□□□□ -0.79
TNFRSF1A-201ENST00000162749 COX6B2Q6YFQ2 88 aa10.1□□□□□ -0.79
TNFRSF1A-201ENST00000162749 PRAC1Q96KF2 57 aa10.06□□□□□ -0.8
TNFRSF1A-201ENST00000162749 MUC17Q685J3 4493 aa10.05□□□□□ -0.8
TNFRSF1A-201ENST00000162749 ADM2Q7Z4H4 148 aa9.99□□□□□ -0.81
TNFRSF1A-201ENST00000162749 MUC2Q02817 5179 aa9.98□□□□□ -0.81
TNFRSF1A-201ENST00000162749 KRTAP4-1Q9BYQ7 146 aa9.97□□□□□ -0.81
TNFRSF1A-201ENST00000162749 SPATA8Q6RVD6 105 aa9.96□□□□□ -0.82
TNFRSF1A-201ENST00000162749 UQCR11O14957 56 aa9.91□□□□□ -0.82
TNFRSF1A-201ENST00000162749 MIR22HGQ0VDD5 57 aa9.9□□□□□ -0.82
TNFRSF1A-201ENST00000162749 LINC01554Q52M75 96 aa9.9□□□□□ -0.83
TNFRSF1A-201ENST00000162749 H1FX-AS1Q4G0G2 97 aa9.83□□□□□ -0.84
TNFRSF1A-201ENST00000162749 UBR4Q5T4S7 5183 aa9.83□□□□□ -0.84
TNFRSF1A-201ENST00000162749 H3BS24 57 aa9.8□□□□□ -0.84
TNFRSF1A-201ENST00000162749 S4R3F8 94 aa9.78□□□□□ -0.84
TNFRSF1A-201ENST00000162749 KRTAP3-3Q9BYR6 98 aa9.77□□□□□ -0.85
TNFRSF1A-201ENST00000162749 KRTAP19-2Q3LHN2 52 aa9.71□□□□□ -0.85
TNFRSF1A-201ENST00000162749 CSAG1Q6PB30 78 aa9.71□□□□□ -0.85
TNFRSF1A-201ENST00000162749 RNF213Q63HN8 5207 aa9.7□□□□□ -0.86
TNFRSF1A-201ENST00000162749 H0YAA0 97 aa9.68□□□□□ -0.86
TNFRSF1A-201ENST00000162749 A0A1B0GU33 70 aa9.66□□□□□ -0.86
TNFRSF1A-201ENST00000162749 FLGP20930 4061 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF1A-201ENST00000162749 FAT4Q6V0I7 4981 aa9.54□□□□□ -0.88
TNFRSF1A-201ENST00000162749 KRTAP10-6P60371 365 aaPredicted RBP9.54□□□□□ -0.88
TNFRSF1A-201ENST00000162749 KRTAP3-2Q9BYR7 98 aa9.5□□□□□ -0.89
TNFRSF1A-201ENST00000162749 LCE2CQ5TA81 110 aa9.46□□□□□ -0.9
TNFRSF1A-201ENST00000162749 KRTAP25-1Q3LHN0 102 aa9.4□□□□□ -0.9
TNFRSF1A-201ENST00000162749 KRTAP13-4Q3LI77 160 aa9.39□□□□□ -0.91
TNFRSF1A-201ENST00000162749 P0C880 135 aa9.37□□□□□ -0.91
TNFRSF1A-201ENST00000162749 ROMO1P60602 79 aa9.27□□□□□ -0.93
TNFRSF1A-201ENST00000162749 MT1HP80294 61 aa9.25□□□□□ -0.93
TNFRSF1A-201ENST00000162749 A0A0D9SG42 100 aa9.23□□□□□ -0.93
TNFRSF1A-201ENST00000162749 K7ERS5 55 aa9.21□□□□□ -0.93
TNFRSF1A-201ENST00000162749 M0R2T5 61 aa9.15□□□□□ -0.94
TNFRSF1A-201ENST00000162749 CRIPTQ9P021 101 aa9.13□□□□□ -0.95
TNFRSF1A-201ENST00000162749 LORP23490 312 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-201ENST00000162749 M0QZ58 72 aa9.07□□□□□ -0.96
TNFRSF1A-201ENST00000162749 KRTAP12-2P59991 146 aa9.05□□□□□ -0.96
TNFRSF1A-201ENST00000162749 R4GN34 69 aa9.04□□□□□ -0.96
TNFRSF1A-201ENST00000162749 KRTAP12-1P59990 96 aa9.01□□□□□ -0.97
TNFRSF1A-201ENST00000162749 SPINT4Q6UDR6 99 aa8.94□□□□□ -0.98
TNFRSF1A-201ENST00000162749 KRTAP9-8Q9BYQ0 159 aa8.93□□□□□ -0.98
TNFRSF1A-201ENST00000162749 MT2AP02795 61 aa8.89□□□□□ -0.99
TNFRSF1A-201ENST00000162749 MT1FP04733 61 aa8.86□□□□□ -0.99
TNFRSF1A-201ENST00000162749 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
TNFRSF1A-201ENST00000162749 KRTAP10-10P60014 251 aa8.81□□□□□ -1
TNFRSF1A-201ENST00000162749 SPRR2GQ9BYE4 73 aa8.75□□□□□ -1.01
TNFRSF1A-201ENST00000162749 C10orf95Q9H7T3 257 aa8.74□□□□□ -1.01
TNFRSF1A-201ENST00000162749 KRTAP19-1Q8IUB9 90 aa8.73□□□□□ -1.01
TNFRSF1A-201ENST00000162749 KRTAP15-1Q3LI76 137 aa8.66□□□□□ -1.02
TNFRSF1A-201ENST00000162749 NDUFAF8A1L188 74 aa8.62□□□□□ -1.03
TNFRSF1A-201ENST00000162749 KRTAP9-3Q9BYQ3 159 aa8.59□□□□□ -1.03
TNFRSF1A-201ENST00000162749 KRTAP19-8Q3LI54 63 aa8.49□□□□□ -1.05
TNFRSF1A-201ENST00000162749 A0A0A0MQY5 61 aa8.46□□□□□ -1.05
TNFRSF1A-201ENST00000162749 CAMK2N1Q7Z7J9 78 aa8.45□□□□□ -1.06
TNFRSF1A-201ENST00000162749 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
TNFRSF1A-201ENST00000162749 MT1BP07438 61 aa8.39□□□□□ -1.07
TNFRSF1A-201ENST00000162749 LCE2BO14633 110 aa8.36□□□□□ -1.07
TNFRSF1A-201ENST00000162749 USH2AO75445 5202 aa8.29□□□□□ -1.08
TNFRSF1A-201ENST00000162749 MT1XP80297 61 aa8.15□□□□□ -1.1
TNFRSF1A-201ENST00000162749 KRTAP10-5P60370 271 aa8.13□□□□□ -1.11
TNFRSF1A-201ENST00000162749 PP632Q6XCG6 107 aa8.07□□□□□ -1.12
TNFRSF1A-201ENST00000162749 TNP1P09430 55 aa8.05□□□□□ -1.12
TNFRSF1A-201ENST00000162749 FSIP2Q5CZC0 6907 aa8.01□□□□□ -1.13
TNFRSF1A-201ENST00000162749 LUZP6Q538Z0 58 aa8□□□□□ -1.13
TNFRSF1A-201ENST00000162749 SSPOA2VEC9 5147 aa7.99□□□□□ -1.13
TNFRSF1A-201ENST00000162749 PRO2289Q9P1D8 64 aa7.99□□□□□ -1.13
TNFRSF1A-201ENST00000162749 LCE2DQ5TA82 110 aaPredicted RBP7.95□□□□□ -1.14
TNFRSF1A-201ENST00000162749 KRTAP23-1A1A580 65 aa7.91□□□□□ -1.14
TNFRSF1A-201ENST00000162749 KRTAP10-7P60409 375 aaPredicted RBP7.83□□□□□ -1.16
TNFRSF1A-201ENST00000162749 KRTAP19-6Q3LI70 58 aa7.8□□□□□ -1.16
TNFRSF1A-201ENST00000162749 KRTAP10-12P60413 245 aa7.74□□□□□ -1.17
TNFRSF1A-201ENST00000162749 LCE3AQ5TA76 89 aa7.73□□□□□ -1.17
TNFRSF1A-201ENST00000162749 KMT2DO14686 5537 aa7.71□□□□□ -1.18
TNFRSF1A-201ENST00000162749 KRTAP9-2Q9BYQ4 174 aa7.66□□□□□ -1.18
TNFRSF1A-201ENST00000162749 FCGBPQ9Y6R7 5405 aaPredicted RBP7.63□□□□□ -1.19
TNFRSF1A-201ENST00000162749 KRTAP8-1Q8IUC2 63 aa7.56□□□□□ -1.2
TNFRSF1A-201ENST00000162749 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
TNFRSF1A-201ENST00000162749 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
TNFRSF1A-201ENST00000162749 SPRR5A0A1B0GTR4 108 aa7.48□□□□□ -1.21
TNFRSF1A-201ENST00000162749 KRTAP12-3P60328 96 aa7.41□□□□□ -1.22
TNFRSF1A-201ENST00000162749 CRCT1Q9UGL9 99 aa7.38□□□□□ -1.23
TNFRSF1A-201ENST00000162749 KRTAP19-5Q3LI72 72 aa7.36□□□□□ -1.23
TNFRSF1A-201ENST00000162749 KRTAP19-7Q3SYF9 63 aa7.28□□□□□ -1.24
TNFRSF1A-201ENST00000162749 MACF1Q9UPN3 7388 aaKnown RBP7.27□□□□□ -1.25
TNFRSF1A-201ENST00000162749 MT1EP04732 61 aa7.12□□□□□ -1.27
TNFRSF1A-201ENST00000162749 SYNE2Q8WXH0 6885 aaKnown RBP7.09□□□□□ -1.27
TNFRSF1A-201ENST00000162749 MUC12Q9UKN1 5478 aa7.09□□□□□ -1.27
TNFRSF1A-201ENST00000162749 KRTAP9-6A0A140TA67 174 aa7□□□□□ -1.29
TNFRSF1A-201ENST00000162749 MT1LQ93083 61 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms