RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 MACF1Q9UPN3 7388 aaKnown RBP11.44□□□□□ -0.58
TSR3-201ENST00000007390 LINC00208Q96KT6 92 aa11.42□□□□□ -0.58
TSR3-201ENST00000007390 MP68P56378 58 aa11.41□□□□□ -0.58
TSR3-201ENST00000007390 FAM236AA0A1B0GUQ0 79 aa11.39□□□□□ -0.59
TSR3-201ENST00000007390 FAM236BA0A1B0GV22 79 aa11.39□□□□□ -0.59
TSR3-201ENST00000007390 H3BPC8 53 aa11.34□□□□□ -0.59
TSR3-201ENST00000007390 KRTAP3-3Q9BYR6 98 aa11.32□□□□□ -0.6
TSR3-201ENST00000007390 KLKP1Q107X0 134 aa11.31□□□□□ -0.6
TSR3-201ENST00000007390 SMIM20Q8N5G0 67 aa11.31□□□□□ -0.6
TSR3-201ENST00000007390 TRAV7A0A075B6U4 112 aa11.29□□□□□ -0.6
TSR3-201ENST00000007390 SYNE2Q8WXH0 6885 aaKnown RBP11.28□□□□□ -0.6
TSR3-201ENST00000007390 SPRR2GQ9BYE4 73 aa11.26□□□□□ -0.61
TSR3-201ENST00000007390 KRTAP19-8Q3LI54 63 aa11.19□□□□□ -0.62
TSR3-201ENST00000007390 MT1BP07438 61 aa11.18□□□□□ -0.62
TSR3-201ENST00000007390 Q5VV11 94 aa11.16□□□□□ -0.62
TSR3-201ENST00000007390 A8MUN3 132 aa11.12□□□□□ -0.63
TSR3-201ENST00000007390 SERP2Q8N6R1 65 aa11.1□□□□□ -0.63
TSR3-201ENST00000007390 NDUFC1O43677 76 aa11.08□□□□□ -0.64
TSR3-201ENST00000007390 CRIPTQ9P021 101 aa11.08□□□□□ -0.64
TSR3-201ENST00000007390 A6NN06 94 aa11.03□□□□□ -0.64
TSR3-201ENST00000007390 H0YAA0 97 aa11.03□□□□□ -0.64
TSR3-201ENST00000007390 SNURFQ9Y675 71 aa11.01□□□□□ -0.65
TSR3-201ENST00000007390 DMAC1Q96GE9 116 aa11□□□□□ -0.65
TSR3-201ENST00000007390 KRTAP6-3Q3LI67 103 aa10.99□□□□□ -0.65
TSR3-201ENST00000007390 C20orf197Q8N268 126 aa10.97□□□□□ -0.65
TSR3-201ENST00000007390 KRTAP10-5P60370 271 aa10.93□□□□□ -0.66
TSR3-201ENST00000007390 COX7CP15954 63 aa10.9□□□□□ -0.66
TSR3-201ENST00000007390 ADM2Q7Z4H4 148 aa10.85□□□□□ -0.67
TSR3-201ENST00000007390 ACYP2P14621 99 aa10.81□□□□□ -0.68
TSR3-201ENST00000007390 SPANXA2-OT1Q8N9U9 137 aa10.81□□□□□ -0.68
TSR3-201ENST00000007390 ANAPC13Q9BS18 74 aa10.73□□□□□ -0.69
TSR3-201ENST00000007390 CYSTM1Q9H1C7 97 aa10.69□□□□□ -0.7
TSR3-201ENST00000007390 NEBP20929 6669 aa10.65□□□□□ -0.7
TSR3-201ENST00000007390 H7BZZ5 65 aa10.64□□□□□ -0.71
TSR3-201ENST00000007390 P0C880 135 aa10.62□□□□□ -0.71
TSR3-201ENST00000007390 MUC12Q9UKN1 5478 aa10.59□□□□□ -0.71
TSR3-201ENST00000007390 R4GN34 69 aa10.59□□□□□ -0.71
TSR3-201ENST00000007390 CHKB-CPT1BH3BT56 60 aa10.55□□□□□ -0.72
TSR3-201ENST00000007390 CCDC179H3BU77 68 aa10.55□□□□□ -0.72
TSR3-201ENST00000007390 KRTAP3-2Q9BYR7 98 aa10.54□□□□□ -0.72
TSR3-201ENST00000007390 SPTSSBQ8NFR3 76 aa10.53□□□□□ -0.72
TSR3-201ENST00000007390 KRTAP5-9P26371 169 aa10.52□□□□□ -0.73
TSR3-201ENST00000007390 PRO2289Q9P1D8 64 aa10.52□□□□□ -0.73
TSR3-201ENST00000007390 PLAC4Q8WY50 150 aa10.51□□□□□ -0.73
TSR3-201ENST00000007390 M0QZ58 72 aa10.49□□□□□ -0.73
TSR3-201ENST00000007390 MT1XP80297 61 aa10.49□□□□□ -0.73
TSR3-201ENST00000007390 COA5Q86WW8 74 aa10.45□□□□□ -0.74
TSR3-201ENST00000007390 KMT2DO14686 5537 aa10.45□□□□□ -0.74
TSR3-201ENST00000007390 MDN1Q9NU22 5596 aa10.37□□□□□ -0.75
TSR3-201ENST00000007390 LINC01554Q52M75 96 aa10.31□□□□□ -0.76
TSR3-201ENST00000007390 KRTAP12-2P59991 146 aa10.26□□□□□ -0.77
TSR3-201ENST00000007390 ATP5EP56381 51 aaPredicted RBP10.21□□□□□ -0.77
TSR3-201ENST00000007390 SPRR2FQ96RM1 72 aa10.16□□□□□ -0.78
TSR3-201ENST00000007390 TMEM258P61165 79 aa10.15□□□□□ -0.78
TSR3-201ENST00000007390 KRTAP20-1Q3LI63 56 aa10.14□□□□□ -0.79
TSR3-201ENST00000007390 KRTAP8-1Q8IUC2 63 aa10.13□□□□□ -0.79
TSR3-201ENST00000007390 SEC61GP60059 68 aa10.03□□□□□ -0.8
TSR3-201ENST00000007390 SERP1Q9Y6X1 66 aa10.03□□□□□ -0.8
TSR3-201ENST00000007390 SPRR2EP22531 72 aa10□□□□□ -0.81
TSR3-201ENST00000007390 SPRR2BP35325 72 aa10□□□□□ -0.81
TSR3-201ENST00000007390 SPRR2AP35326 72 aa10□□□□□ -0.81
TSR3-201ENST00000007390 KRTAP4-8A0A0G2JLE6 195 aa9.99□□□□□ -0.81
TSR3-201ENST00000007390 KRTAP13-4Q3LI77 160 aa9.99□□□□□ -0.81
TSR3-201ENST00000007390 KRTAP4-8Q9BYQ9 185 aa9.99□□□□□ -0.81
TSR3-201ENST00000007390 KRTAP10-7P60409 375 aaPredicted RBP9.98□□□□□ -0.81
TSR3-201ENST00000007390 KRTAP10-12P60413 245 aa9.97□□□□□ -0.81
TSR3-201ENST00000007390 LCE1AQ5T7P2 110 aa9.91□□□□□ -0.82
TSR3-201ENST00000007390 KRTAP2-3P0C7H8 128 aa9.9□□□□□ -0.82
TSR3-201ENST00000007390 KRTAP2-4Q9BYR9 128 aa9.9□□□□□ -0.82
TSR3-201ENST00000007390 A0A1B0GU69 56 aa9.89□□□□□ -0.83
TSR3-201ENST00000007390 A0A1B0GU33 70 aa9.87□□□□□ -0.83
TSR3-201ENST00000007390 PCP4P48539 62 aa9.82□□□□□ -0.84
TSR3-201ENST00000007390 LINC01558Q9Y6Z2 57 aa9.82□□□□□ -0.84
TSR3-201ENST00000007390 SPATA8Q6RVD6 105 aa9.79□□□□□ -0.84
TSR3-201ENST00000007390 CAMK2N1Q7Z7J9 78 aa9.73□□□□□ -0.85
TSR3-201ENST00000007390 PRR15LQ9BU68 103 aa9.71□□□□□ -0.86
TSR3-201ENST00000007390 SPRR2DP22532 72 aa9.67□□□□□ -0.86
TSR3-201ENST00000007390 A0A0D9SG42 100 aa9.66□□□□□ -0.86
TSR3-201ENST00000007390 KRTAP2-2Q9BYT5 123 aa9.58□□□□□ -0.88
TSR3-201ENST00000007390 KRTAP2-1Q9BYU5 128 aa9.58□□□□□ -0.88
TSR3-201ENST00000007390 SMIM26A0A096LP01 95 aa9.57□□□□□ -0.88
TSR3-201ENST00000007390 KRTAP12-1P59990 96 aa9.55□□□□□ -0.88
TSR3-201ENST00000007390 A8MU10 97 aa9.52□□□□□ -0.89
TSR3-201ENST00000007390 Q1T7F1 81 aa9.51□□□□□ -0.89
TSR3-201ENST00000007390 SPINT4Q6UDR6 99 aa9.5□□□□□ -0.89
TSR3-201ENST00000007390 V9GYY9 64 aa9.49□□□□□ -0.89
TSR3-201ENST00000007390 RPS28P62857 69 aaKnown RBP9.48□□□□□ -0.89
TSR3-201ENST00000007390 UQCR11O14957 56 aa9.44□□□□□ -0.9
TSR3-201ENST00000007390 LCE3BQ5TA77 95 aa9.41□□□□□ -0.9
TSR3-201ENST00000007390 KRTAP19-7Q3SYF9 63 aa9.38□□□□□ -0.91
TSR3-201ENST00000007390 PSPHP1O15172 72 aa9.37□□□□□ -0.91
TSR3-201ENST00000007390 MT1EP04732 61 aa9.3□□□□□ -0.92
TSR3-201ENST00000007390 MIR22HGQ0VDD5 57 aa9.27□□□□□ -0.93
TSR3-201ENST00000007390 LCE5AQ5TCM9 118 aa9.24□□□□□ -0.93
TSR3-201ENST00000007390 KRTAP19-3Q7Z4W3 81 aa9.21□□□□□ -0.94
TSR3-201ENST00000007390 DSTQ03001 7570 aaKnown RBP9.13□□□□□ -0.95
TSR3-201ENST00000007390 KRTAP19-5Q3LI72 72 aa9.12□□□□□ -0.95
TSR3-201ENST00000007390 C10orf95Q9H7T3 257 aa9.11□□□□□ -0.95
TSR3-201ENST00000007390 A6NED7 52 aa9.05□□□□□ -0.96
TSR3-201ENST00000007390 MT1GP13640 62 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms