RNA–Protein interactions for RNA: ENST00000007264.6

RPUSD1-201, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RPUSD1, Length 2,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-201ENST00000007264 SEC61GP60059 68 aa12.23□□□□□ -0.45
RPUSD1-201ENST00000007264 SEC61BP60468 96 aaKnown RBP12.18□□□□□ -0.46
RPUSD1-201ENST00000007264 CDC42SE1Q9NRR8 79 aa12.14□□□□□ -0.47
RPUSD1-201ENST00000007264 LCA10Q71F78 164 aa12.14□□□□□ -0.47
RPUSD1-201ENST00000007264 RBM12B-AS1Q9P1G2 102 aa12.13□□□□□ -0.47
RPUSD1-201ENST00000007264 A8MU10 97 aa12.12□□□□□ -0.47
RPUSD1-201ENST00000007264 S4R3F8 94 aa12.11□□□□□ -0.47
RPUSD1-201ENST00000007264 H1FX-AS1Q4G0G2 97 aa12.09□□□□□ -0.47
RPUSD1-201ENST00000007264 UQCR11O14957 56 aa12.06□□□□□ -0.48
RPUSD1-201ENST00000007264 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
RPUSD1-201ENST00000007264 MIR22HGQ0VDD5 57 aa11.96□□□□□ -0.5
RPUSD1-201ENST00000007264 PCLOQ9Y6V0 5065 aa11.94□□□□□ -0.5
RPUSD1-201ENST00000007264 SPATA8Q6RVD6 105 aa11.93□□□□□ -0.5
RPUSD1-201ENST00000007264 A0A1B0GU33 70 aa11.87□□□□□ -0.51
RPUSD1-201ENST00000007264 PMAIP1Q13794 54 aa11.83□□□□□ -0.51
RPUSD1-201ENST00000007264 KRTAP4-1Q9BYQ7 146 aa11.83□□□□□ -0.51
RPUSD1-201ENST00000007264 MUC17Q685J3 4493 aa11.82□□□□□ -0.52
RPUSD1-201ENST00000007264 CSAG1Q6PB30 78 aa11.79□□□□□ -0.52
RPUSD1-201ENST00000007264 HERC1Q15751 4861 aa11.76□□□□□ -0.53
RPUSD1-201ENST00000007264 H0YAA0 97 aa11.72□□□□□ -0.53
RPUSD1-201ENST00000007264 KRTAP10-6P60371 365 aaPredicted RBP11.71□□□□□ -0.54
RPUSD1-201ENST00000007264 KRTAP3-2Q9BYR7 98 aa11.68□□□□□ -0.54
RPUSD1-201ENST00000007264 HMCN2Q8NDA2 5059 aa11.66□□□□□ -0.54
RPUSD1-201ENST00000007264 A6NN06 94 aa11.64□□□□□ -0.55
RPUSD1-201ENST00000007264 ADM2Q7Z4H4 148 aa11.64□□□□□ -0.55
RPUSD1-201ENST00000007264 P0C880 135 aa11.59□□□□□ -0.55
RPUSD1-201ENST00000007264 KRTAP19-2Q3LHN2 52 aa11.53□□□□□ -0.56
RPUSD1-201ENST00000007264 MUC2Q02817 5179 aa11.46□□□□□ -0.57
RPUSD1-201ENST00000007264 KRTAP13-4Q3LI77 160 aa11.46□□□□□ -0.57
RPUSD1-201ENST00000007264 KTN1-AS1Q86SY8 53 aa11.42□□□□□ -0.58
RPUSD1-201ENST00000007264 K7ERS5 55 aa11.39□□□□□ -0.59
RPUSD1-201ENST00000007264 A0A0D9SG42 100 aa11.37□□□□□ -0.59
RPUSD1-201ENST00000007264 M0QZ58 72 aa11.32□□□□□ -0.6
RPUSD1-201ENST00000007264 FLGP20930 4061 aaPredicted RBP11.25□□□□□ -0.61
RPUSD1-201ENST00000007264 R4GN34 69 aa11.21□□□□□ -0.61
RPUSD1-201ENST00000007264 LCE2CQ5TA81 110 aa11.14□□□□□ -0.63
RPUSD1-201ENST00000007264 UBR4Q5T4S7 5183 aa11.12□□□□□ -0.63
RPUSD1-201ENST00000007264 RNF213Q63HN8 5207 aa11.1□□□□□ -0.63
RPUSD1-201ENST00000007264 LORP23490 312 aaPredicted RBP11.08□□□□□ -0.64
RPUSD1-201ENST00000007264 SPINT4Q6UDR6 99 aa11.08□□□□□ -0.64
RPUSD1-201ENST00000007264 LINC01554Q52M75 96 aa11.07□□□□□ -0.64
RPUSD1-201ENST00000007264 KRTAP12-2P59991 146 aa11.06□□□□□ -0.64
RPUSD1-201ENST00000007264 KRTAP12-1P59990 96 aa11.05□□□□□ -0.64
RPUSD1-201ENST00000007264 PRAC1Q96KF2 57 aa11.03□□□□□ -0.64
RPUSD1-201ENST00000007264 M0R2T5 61 aa10.99□□□□□ -0.65
RPUSD1-201ENST00000007264 FAT4Q6V0I7 4981 aa10.96□□□□□ -0.65
RPUSD1-201ENST00000007264 ROMO1P60602 79 aa10.94□□□□□ -0.66
RPUSD1-201ENST00000007264 MT1HP80294 61 aa10.93□□□□□ -0.66
RPUSD1-201ENST00000007264 CRIPTQ9P021 101 aa10.89□□□□□ -0.67
RPUSD1-201ENST00000007264 KRTAP25-1Q3LHN0 102 aa10.66□□□□□ -0.7
RPUSD1-201ENST00000007264 KRTAP10-10P60014 251 aa10.59□□□□□ -0.71
RPUSD1-201ENST00000007264 MT2AP02795 61 aa10.58□□□□□ -0.72
RPUSD1-201ENST00000007264 CAMK2N1Q7Z7J9 78 aa10.57□□□□□ -0.72
RPUSD1-201ENST00000007264 KRTAP9-8Q9BYQ0 159 aa10.56□□□□□ -0.72
RPUSD1-201ENST00000007264 SPRR2GQ9BYE4 73 aa10.55□□□□□ -0.72
RPUSD1-201ENST00000007264 MT1FP04733 61 aa10.54□□□□□ -0.72
RPUSD1-201ENST00000007264 KRTAP19-1Q8IUB9 90 aa10.48□□□□□ -0.73
RPUSD1-201ENST00000007264 C10orf95Q9H7T3 257 aa10.43□□□□□ -0.74
RPUSD1-201ENST00000007264 PLAC4Q8WY50 150 aa10.38□□□□□ -0.75
RPUSD1-201ENST00000007264 KRTAP19-8Q3LI54 63 aa10.19□□□□□ -0.78
RPUSD1-201ENST00000007264 LCE2AQ5TA79 106 aaPredicted RBP10.18□□□□□ -0.78
RPUSD1-201ENST00000007264 KRTAP9-3Q9BYQ3 159 aa10.16□□□□□ -0.78
RPUSD1-201ENST00000007264 TNP1P09430 55 aa10.08□□□□□ -0.8
RPUSD1-201ENST00000007264 MT1BP07438 61 aa10.04□□□□□ -0.8
RPUSD1-201ENST00000007264 PP632Q6XCG6 107 aa9.97□□□□□ -0.81
RPUSD1-201ENST00000007264 LCE2BO14633 110 aa9.83□□□□□ -0.84
RPUSD1-201ENST00000007264 KRTAP10-5P60370 271 aa9.81□□□□□ -0.84
RPUSD1-201ENST00000007264 MT1XP80297 61 aa9.81□□□□□ -0.84
RPUSD1-201ENST00000007264 KRTAP23-1A1A580 65 aa9.81□□□□□ -0.84
RPUSD1-201ENST00000007264 PRO2289Q9P1D8 64 aa9.73□□□□□ -0.85
RPUSD1-201ENST00000007264 LCE3AQ5TA76 89 aa9.57□□□□□ -0.88
RPUSD1-201ENST00000007264 KRTAP15-1Q3LI76 137 aa9.5□□□□□ -0.89
RPUSD1-201ENST00000007264 USH2AO75445 5202 aa9.49□□□□□ -0.89
RPUSD1-201ENST00000007264 KRTAP10-12P60413 245 aa9.49□□□□□ -0.89
RPUSD1-201ENST00000007264 KRTAP10-7P60409 375 aaPredicted RBP9.47□□□□□ -0.89
RPUSD1-201ENST00000007264 KRTAP8-1Q8IUC2 63 aa9.34□□□□□ -0.91
RPUSD1-201ENST00000007264 KRTAP12-3P60328 96 aa9.17□□□□□ -0.94
RPUSD1-201ENST00000007264 SSPOA2VEC9 5147 aa9.16□□□□□ -0.94
RPUSD1-201ENST00000007264 KRTAP19-6Q3LI70 58 aa9.11□□□□□ -0.95
RPUSD1-201ENST00000007264 LCE2DQ5TA82 110 aaPredicted RBP9.09□□□□□ -0.95
RPUSD1-201ENST00000007264 KRTAP4-8A0A0G2JLE6 195 aa9.01□□□□□ -0.97
RPUSD1-201ENST00000007264 KRTAP4-8Q9BYQ9 185 aa9.01□□□□□ -0.97
RPUSD1-201ENST00000007264 NDUFAF8A1L188 74 aa9□□□□□ -0.97
RPUSD1-201ENST00000007264 KRTAP19-5Q3LI72 72 aa8.99□□□□□ -0.97
RPUSD1-201ENST00000007264 KMT2DO14686 5537 aa8.98□□□□□ -0.97
RPUSD1-201ENST00000007264 H3BS24 57 aa8.97□□□□□ -0.97
RPUSD1-201ENST00000007264 LUZP6Q538Z0 58 aa8.96□□□□□ -0.98
RPUSD1-201ENST00000007264 FSIP2Q5CZC0 6907 aa8.95□□□□□ -0.98
RPUSD1-201ENST00000007264 SPRR5A0A1B0GTR4 108 aa8.93□□□□□ -0.98
RPUSD1-201ENST00000007264 KRTAP19-7Q3SYF9 63 aa8.74□□□□□ -1.01
RPUSD1-201ENST00000007264 FCGBPQ9Y6R7 5405 aaPredicted RBP8.65□□□□□ -1.02
RPUSD1-201ENST00000007264 LCE3CQ5T5A8 94 aa8.59□□□□□ -1.03
RPUSD1-201ENST00000007264 KRTAP9-2Q9BYQ4 174 aa8.58□□□□□ -1.04
RPUSD1-201ENST00000007264 MT1EP04732 61 aa8.57□□□□□ -1.04
RPUSD1-201ENST00000007264 KRTAP19-4Q3LI73 84 aa8.45□□□□□ -1.06
RPUSD1-201ENST00000007264 MT1LQ93083 61 aa8.45□□□□□ -1.06
RPUSD1-201ENST00000007264 CRCT1Q9UGL9 99 aa8.34□□□□□ -1.07
RPUSD1-201ENST00000007264 KRTAP4-7Q9BYR0 210 aa8.29□□□□□ -1.08
RPUSD1-201ENST00000007264 SPRR2FQ96RM1 72 aa8.22□□□□□ -1.09
RPUSD1-201ENST00000007264 MACF1Q9UPN3 7388 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms