RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 SnrpcQ62241 159 aa16.22■□□□□ 0.19
Trim27-207ENSMUST00000223065 Usmg5Q78IK2 58 aa16.22■□□□□ 0.19
Trim27-207ENSMUST00000223065 Borcs7Q9CRC6 105 aa16.22■□□□□ 0.19
Trim27-207ENSMUST00000223065 Samd5Q3V1H9 173 aa16.21■□□□□ 0.19
Trim27-207ENSMUST00000223065 Srsf2Q62093 221 aaKnown RBP16.21■□□□□ 0.19
Trim27-207ENSMUST00000223065 Gm5105Q8C6Y9 112 aa16.21■□□□□ 0.19
Trim27-207ENSMUST00000223065 Ube2l6Q9QZU9 153 aa16.21■□□□□ 0.19
Trim27-207ENSMUST00000223065 Igkv4-81A0A0G2JEY5 119 aa16.21■□□□□ 0.18
Trim27-207ENSMUST00000223065 Tstd1E9PY03 133 aa16.2■□□□□ 0.18
Trim27-207ENSMUST00000223065 Gm10226O88253 85 aa16.2■□□□□ 0.18
Trim27-207ENSMUST00000223065 Crip3Q6Q6R3 243 aa16.2■□□□□ 0.18
Trim27-207ENSMUST00000223065 Znf580Q9DB38 172 aa16.2■□□□□ 0.18
Trim27-207ENSMUST00000223065 Cml3Q9JIY8 226 aa16.2■□□□□ 0.18
Trim27-207ENSMUST00000223065 Trav2Q5R1I9 109 aa16.19■□□□□ 0.18
Trim27-207ENSMUST00000223065 Gm5148Q8BGG2 154 aa16.19■□□□□ 0.18
Trim27-207ENSMUST00000223065 Olfr1431Q8VF59 312 aa16.19■□□□□ 0.18
Trim27-207ENSMUST00000223065 Olfr365Q8VFT2 312 aa16.19■□□□□ 0.18
Trim27-207ENSMUST00000223065 Dpm3Q9D1Q4 92 aa16.19■□□□□ 0.18
Trim27-207ENSMUST00000223065 Smad7O35253 426 aa16.19■□□□□ 0.18
Trim27-207ENSMUST00000223065 Vmn1r202Q8R259 302 aa16.19■□□□□ 0.18
Trim27-207ENSMUST00000223065 Vmn1r63Q9EPT1 300 aa16.19■□□□□ 0.18
Trim27-207ENSMUST00000223065 Npc2Q9Z0J0 149 aa16.19■□□□□ 0.18
Trim27-207ENSMUST00000223065 FlncQ8VHX6 2726 aaKnown RBP16.18■□□□□ 0.18
Trim27-207ENSMUST00000223065 Gm10521E9PZK0 135 aa16.18■□□□□ 0.18
Trim27-207ENSMUST00000223065 Aqp7O54794 303 aa16.18■□□□□ 0.18
Trim27-207ENSMUST00000223065 Ccl21aP84444 133 aa16.18■□□□□ 0.18
Trim27-207ENSMUST00000223065 Ccl21bP86792 133 aa16.18■□□□□ 0.18
Trim27-207ENSMUST00000223065 Ccl21cP86793 133 aa16.18■□□□□ 0.18
Trim27-207ENSMUST00000223065 Ormdl3Q9CPZ6 153 aa16.18■□□□□ 0.18
Trim27-207ENSMUST00000223065 Mrpl53Q9D1H8 118 aaKnown RBP16.18■□□□□ 0.18
Trim27-207ENSMUST00000223065 Usp9xP70398 2559 aaKnown RBP16.18■□□□□ 0.18
Trim27-207ENSMUST00000223065 Ighv1-22A0A075B5U7 117 aa16.18■□□□□ 0.18
Trim27-207ENSMUST00000223065 9130213A22RikQ3V3T2 120 aa16.18■□□□□ 0.18
Trim27-207ENSMUST00000223065 Vsig8Q6P3A4 417 aa16.18■□□□□ 0.18
Trim27-207ENSMUST00000223065 Hyls1Q9CXX0 307 aa16.18■□□□□ 0.18
Trim27-207ENSMUST00000223065 Akap13E9Q394 2776 aa16.17■□□□□ 0.18
Trim27-207ENSMUST00000223065 Foxc2Q61850 494 aa16.17■□□□□ 0.18
Trim27-207ENSMUST00000223065 Gtsf1lQ9CWD0 151 aa16.17■□□□□ 0.18
Trim27-207ENSMUST00000223065 Shisa9Q9CZN4 424 aa16.17■□□□□ 0.18
Trim27-207ENSMUST00000223065 Mrpl32Q9DCI9 187 aaKnown RBP16.17■□□□□ 0.18
Trim27-207ENSMUST00000223065 OtogO55225 2910 aa16.17■□□□□ 0.18
Trim27-207ENSMUST00000223065 Ighv1-80A0A075B5Y3 117 aa16.16■□□□□ 0.18
Trim27-207ENSMUST00000223065 Zfp248Q640N4 576 aa16.16■□□□□ 0.18
Trim27-207ENSMUST00000223065 Q9D7E4 109 aa16.16■□□□□ 0.18
Trim27-207ENSMUST00000223065 Ankhd1E9PUR0 2548 aaKnown RBP16.16■□□□□ 0.18
Trim27-207ENSMUST00000223065 Igkv4-57-1A0A075B5M4 119 aa16.16■□□□□ 0.18
Trim27-207ENSMUST00000223065 C2cd3Q52KB6 2323 aa16.16■□□□□ 0.18
Trim27-207ENSMUST00000223065 Gm13030A2APQ6 143 aa16.15■□□□□ 0.18
Trim27-207ENSMUST00000223065 Hspe1Q64433 102 aaKnown RBP16.15■□□□□ 0.18
Trim27-207ENSMUST00000223065 Ifitm2Q99J93 144 aa16.15■□□□□ 0.18
Trim27-207ENSMUST00000223065 CnfnQ6PCW6 111 aa16.14■□□□□ 0.17
Trim27-207ENSMUST00000223065 Cnn3Q9DAW9 330 aaKnown RBP16.14■□□□□ 0.17
Trim27-207ENSMUST00000223065 Bahcc1Q3UHR0 2643 aa16.14■□□□□ 0.17
Trim27-207ENSMUST00000223065 Trav7-5A0A0G2JFX6 112 aa16.14■□□□□ 0.17
Trim27-207ENSMUST00000223065 Cited1P97769 203 aa16.14■□□□□ 0.17
Trim27-207ENSMUST00000223065 7420426K07RikQ3UX66 186 aa16.14■□□□□ 0.17
Trim27-207ENSMUST00000223065 Gm10188Q3V432 135 aa16.14■□□□□ 0.17
Trim27-207ENSMUST00000223065 Ndufa4l2Q4FZG9 87 aa16.14■□□□□ 0.17
Trim27-207ENSMUST00000223065 Odf1Q61999 247 aa16.14■□□□□ 0.17
Trim27-207ENSMUST00000223065 Klhdc1Q80YG3 406 aa16.14■□□□□ 0.17
Trim27-207ENSMUST00000223065 Spink2Q8BMY7 86 aa16.14■□□□□ 0.17
Trim27-207ENSMUST00000223065 5930422O12RikQ8C4Y4 123 aa16.14■□□□□ 0.17
Trim27-207ENSMUST00000223065 Trav6-4A0A075B6B4 115 aa16.13■□□□□ 0.17
Trim27-207ENSMUST00000223065 Vmn1r1E9PVR6 306 aa16.13■□□□□ 0.17
Trim27-207ENSMUST00000223065 1810011H11RikE9PVZ2 95 aa16.13■□□□□ 0.17
Trim27-207ENSMUST00000223065 TbpP29037 316 aa16.13■□□□□ 0.17
Trim27-207ENSMUST00000223065 Tmem241Q3UME2 297 aa16.13■□□□□ 0.17
Trim27-207ENSMUST00000223065 Spock3Q8BKV0 436 aa16.13■□□□□ 0.17
Trim27-207ENSMUST00000223065 Mien1Q9CQ86 115 aa16.13■□□□□ 0.17
Trim27-207ENSMUST00000223065 Myo18bE9PV66 2605 aa16.13■□□□□ 0.17
Trim27-207ENSMUST00000223065 Gm21994F6T2D2 329 aa16.12■□□□□ 0.17
Trim27-207ENSMUST00000223065 P01791 123 aa16.12■□□□□ 0.17
Trim27-207ENSMUST00000223065 Tnfrsf9P20334 256 aa16.12■□□□□ 0.17
Trim27-207ENSMUST00000223065 Gm9913Q8BQQ2 135 aa16.12■□□□□ 0.17
Trim27-207ENSMUST00000223065 Q9DAB9 146 aa16.12■□□□□ 0.17
Trim27-207ENSMUST00000223065 Psmb2Q9R1P3 201 aa16.12■□□□□ 0.17
Trim27-207ENSMUST00000223065 Ighv1-23A0A0A6YVW3 117 aa16.12■□□□□ 0.17
Trim27-207ENSMUST00000223065 Gm20517G3UVU6 152 aa16.12■□□□□ 0.17
Trim27-207ENSMUST00000223065 NpyP57774 97 aa16.12■□□□□ 0.17
Trim27-207ENSMUST00000223065 Fhl1P97447 280 aaKnown RBP16.12■□□□□ 0.17
Trim27-207ENSMUST00000223065 Gm94Q3V2D2 93 aa16.12■□□□□ 0.17
Trim27-207ENSMUST00000223065 Q4KKZ1 196 aa16.12■□□□□ 0.17
Trim27-207ENSMUST00000223065 Olfr761Q7TRJ0 323 aa16.12■□□□□ 0.17
Trim27-207ENSMUST00000223065 Tcrg-V4A0A0B4J1J8 138 aa16.11■□□□□ 0.17
Trim27-207ENSMUST00000223065 Ccl17F6R5P4 103 aa16.11■□□□□ 0.17
Trim27-207ENSMUST00000223065 Fabp4P04117 132 aa16.11■□□□□ 0.17
Trim27-207ENSMUST00000223065 Bri3P28662 125 aa16.11■□□□□ 0.17
Trim27-207ENSMUST00000223065 Nutf2P61971 127 aa16.11■□□□□ 0.17
Trim27-207ENSMUST00000223065 Psmb11Q8BG41 302 aa16.11■□□□□ 0.17
Trim27-207ENSMUST00000223065 NpbQ8K4P1 119 aa16.11■□□□□ 0.17
Trim27-207ENSMUST00000223065 Znhit3Q9CQK1 151 aa16.11■□□□□ 0.17
Trim27-207ENSMUST00000223065 Tmem160Q9D938 188 aa16.11■□□□□ 0.17
Trim27-207ENSMUST00000223065 Trav19A0A0B4J1K4 119 aa16.11■□□□□ 0.17
Trim27-207ENSMUST00000223065 Igkv20-101-2A0A0G2JDU3 113 aa16.11■□□□□ 0.17
Trim27-207ENSMUST00000223065 Gm9961Q8BNV2 113 aa16.11■□□□□ 0.17
Trim27-207ENSMUST00000223065 Tctex1d4Q8CDY7 219 aa16.11■□□□□ 0.17
Trim27-207ENSMUST00000223065 Ighv1-82A0A0G2JEU7 117 aa16.1■□□□□ 0.17
Trim27-207ENSMUST00000223065 Igll1P20764 209 aa16.1■□□□□ 0.17
Trim27-207ENSMUST00000223065 Bsph1Q3UW26 133 aa16.1■□□□□ 0.17
Trim27-207ENSMUST00000223065 RhohQ9D3G9 191 aa16.1■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms