RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Trdv2-2Q5R1A4 116 aa15.92■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Btf3Q64152 204 aaKnown RBP15.92■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 4930474N05RikQ8BVR5 218 aa15.92■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Olfr954Q9EQB6 314 aa15.92■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Ighv2-7A0A075B5Q8 116 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Rhox4eQ504P9 205 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Muc15Q8C6Z1 331 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Vmn1r202Q8R259 302 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Odf3Q920N1 254 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Shisal2bQ9D1Y9 158 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Tmem239Q9DA47 151 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 SelenokQ9JLJ1 94 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Trav14n-3A0A075B645 120 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Fhl2O70433 279 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 NdnP25233 325 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 F2rl1P55086 399 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Rpl19P84099 196 aaKnown RBP15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Smim7Q5RKS2 75 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Olfr1437Q7TQR7 312 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 QrfpQ8CE23 124 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Psmg3Q9CZH3 122 aa15.91■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Trbv17A0A140T8P8 114 aa15.9■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Gm21834J3QN05 151 aa15.9■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 AsipQ03288 131 aa15.9■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Pafah1b2Q61206 229 aa15.9■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Rasl10aQ8K5A4 203 aa15.9■□□□□ 0.14
Ccdc88a-202ENSMUST00000109477 Vmn1r1E9PVR6 306 aa15.89■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Fhl1P97447 280 aaKnown RBP15.89■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 ChtopQ9CY57 249 aaKnown RBP15.89■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 GlmpQ9JHJ3 404 aa15.89■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Nbeal2Q6ZQA0 2742 aa15.88■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 S100a10P08207 97 aa15.88■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Olfr1537P34983 314 aa15.88■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Snrpd3P62320 126 aaKnown RBP15.88■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Wfdc17Q5SSJ1 76 aa15.88■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Plekhb2Q9QZC7 221 aa15.88■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Rtl10D3YWW5 146 aa15.88■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Tmem256Q5F285 113 aa15.88■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Ighv1-50A0A075B5W1 117 aa15.87■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Arl11Q6P3A9 176 aa15.87■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Ms4a12A0A087WSB9 263 aa15.86■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Tpt1P63028 172 aaKnown RBP15.86■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Olfr1419Q7TQS2 343 aa15.86■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Zmat4Q8BZ94 229 aa15.86■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Ceacam11Q9D0Z8 303 aa15.86■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Tspan4Q9DCK3 238 aa15.86■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Dusp14Q9JLY7 198 aa15.86■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Esm1Q9QYY7 184 aa15.86■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Trav16nA0A075B634 117 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Ighv2-3A0A075B696 115 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Ighv5-9-1A0A0A6YVS4 126 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Rnf152Q8BG47 203 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Nat6Q9R123 314 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Ighv3-8A0A075B5T0 131 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Trav9-2A0A075B647 113 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Trav9-4A0A0B4J1K2 113 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Sub1P11031 127 aaKnown RBP15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Fa2hQ5MPP0 372 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Rbfox3Q8BIF2 374 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Immp2lQ8BPT6 175 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Spata3Q9D9T6 193 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 RetnlaQ9EP95 111 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 TroQ6DIC6 2087 aa15.85■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Tenm1Q9WTS4 2731 aa15.84■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Ren1P06281 402 aa15.84■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 CtsgP28293 261 aa15.84■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Cox6b1P56391 86 aaKnown RBP15.84■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Mpv17lQ99MS3 194 aa15.84■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Urm1Q9D2P4 101 aa15.84■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Gm14214V9GX35 225 aa15.84■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Olfr1320A2AHM8 319 aa15.83■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Spink11Q09TK7 88 aa15.83■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Olfr1012Q8VFJ7 311 aa15.83■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Olfr435Q8VFS3 313 aa15.83■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Q9D7E4 109 aa15.83■□□□□ 0.13
Ccdc88a-202ENSMUST00000109477 Gm12169F2Z474 250 aa15.82■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Rhox4gQ2MDF7 205 aa15.82■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Fam216aQ9DB54 251 aa15.82■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Gm3443F7CCV5 94 aa15.82■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Hist1h2bmP10854 126 aa15.82■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Hist1h2bhQ64478 126 aa15.82■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Hist2h2bbQ64525 126 aa15.82■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Hist1h2bcQ6ZWY9 126 aaKnown RBP15.82■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Gphb5Q812B2 130 aa15.82■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Psmb11Q8BG41 302 aa15.82■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Gm14325A2AW67 498 aa15.81■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Klk1b4P00757 256 aa15.81■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Rps20P60867 119 aaKnown RBP15.81■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Pex7P97865 318 aa15.81■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 A930003A15RikQ3U552 87 aa15.81■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Olfr317Q5NCD6 327 aa15.81■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Hspe1Q64433 102 aaKnown RBP15.81■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Mrps10Q80ZK0 160 aaKnown RBP15.81■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Klk7Q91VE3 249 aa15.81■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Stard4Q99JV5 224 aa15.81■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Golt1bQ9CR60 138 aa15.81■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Trbv30A0A0B4J1P1 111 aa15.8■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Reg3gO09049 174 aa15.8■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 MymxQ2Q5T5 84 aa15.8■□□□□ 0.12
Ccdc88a-202ENSMUST00000109477 Obox1Q9D350 204 aa15.8■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms