RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Nup210lQ9D2F7 1881 aa8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Svs5P30933 122 aa8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Trav2Q5R1I9 109 aa8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ighv1-81A0A075B5Y4 117 aa8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ighv8-4A0A0A6YW26 117 aa8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ighv8-8A0A0A6YXQ0 119 aa8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Zcchc24B2RVL6 241 aaKnown RBP8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Klf13Q9JJZ6 289 aa8.12□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ighv1-39A0A075B5V5 117 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ighv1-69A0A0G2JFS5 117 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Igkv5-37A0A140T8N4 115 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 P01793 123 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Tmem213Q08EA8 116 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Gm5105Q8C6Y9 112 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Fhl3Q9R059 289 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 KprpB2RUR4 657 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Atp5eP56382 52 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Gm10384Q3UQ87 92 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 AmelxP63277 210 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Prok2Q9QXU7 128 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Sptbn1Q62261 2363 aaKnown RBP8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Gm26558Q8BLW8 286 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Tctex1d4Q8CDY7 219 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Akap6E9Q9K8 2307 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Casp8ap2Q9WUF3 1962 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Samd13D3YUG0 102 aa8.11□□□□□ -1.11
Ubr1-201ENSMUST00000028728 ElaneQ3UP87 265 aa8.1□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Cmc4Q61908 68 aa8.1□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ypel4Q65Z93 127 aa8.1□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ccl6P27784 116 aa8.1□□□□□ -1.11
Ubr1-201ENSMUST00000028728 PoleQ9WVF7 2283 aa8.1□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ighv1-9A0A0A6YW37 117 aa8.1□□□□□ -1.11
Ubr1-201ENSMUST00000028728 LeprotO89013 131 aa8.1□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ighv3-6P18531 116 aa8.1□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Pi4kaE9Q3L2 2105 aa8.1□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Dpm3Q9D1Q4 92 aa8.1□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Gm26602M0QWA4 95 aa8.1□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Smim26Q3V460 107 aa8.1□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Wnk2Q3UH66 2149 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Trav9d-1A0A075B699 112 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Gm9936Q8C864 160 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Dock9Q8BIK4 2055 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ighv1-80A0A075B5Y3 117 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 P01724 129 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 P01725 110 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 P01727 129 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 P01630 113 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ifitm1Q9D103 106 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Tnfrsf23Q9ER63 176 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Igkv4-90A0A075B5L3 117 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ighv1-31A0A0A6YWK5 117 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 P0C913 63 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Sdhaf1Q3U276 118 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Prdm6Q3UZD5 596 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 9930022D16RikQ8BG27 128 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ss18l2Q9D174 77 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ubl5Q9EPV8 73 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Ighv1-62-3P01754 117 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Tcl1b4P56844 120 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Lage3Q9CR70 148 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Tmem219Q9D123 240 aa8.09□□□□□ -1.11
Ubr1-201ENSMUST00000028728 Gm6034E9Q101 117 aa8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Parp4E9PYK3 1969 aa8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Gm5468Q8C3D3 155 aa8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 CntfrO88507 372 aa8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Rchy1Q9CR50 261 aa8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Asxl3Q8C4A5 2259 aa8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Cysrt1Q9D1E4 142 aa8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Fam216aQ9DB54 251 aa8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 TncQ80YX1 2110 aa8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Egr1P08046 533 aa8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Olfr313Q5NC55 308 aa8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Taf15Q8BQ46 557 aaKnown RBP8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Cdpf1Q8R3A2 119 aa8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 P01794 123 aa8.08□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Tmem86bQ497J1 226 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Pear1Q8VIK5 1034 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Defb30Q30KN4 75 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Gm4763Q8CFJ5 196 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 1700001C19RikQ8K168 210 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Cep295Q8BQ48 2412 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Trbv14A0A140T8L9 115 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Gm7102J3QQ10 178 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Il22ra2Q80XF5 230 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Ighv1-55A0A075B5W6 117 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 P01726 129 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 P01791 123 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Pgpep1lQ9CWB5 130 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 4930447F04RikA2AFR2 126 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Runx1Q03347 451 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Jmjd1cQ69ZK6 2350 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Vwc2lQ505H4 222 aa8.07□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Rbx1P62878 108 aa8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 A530064D06RikQ8BNV8 229 aa8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Lect2O88803 151 aa8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 P04940 107 aa8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 P04941 107 aa8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 Gm29666A0A087WQ99 126 aa8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 PspnO70300 156 aa8.06□□□□□ -1.12
Ubr1-201ENSMUST00000028728 3110018I06RikQ9CXS0 120 aa8.06□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms