RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 Bri3P28662 125 aa15.8■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Vsig8Q6P3A4 417 aa15.8■□□□□ 0.12
Cdx1-201ENSMUST00000025521 5930422O12RikQ8C4Y4 123 aa15.8■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Ighv1-23A0A0A6YVW3 117 aa15.79■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Ndufa4l2Q4FZG9 87 aa15.79■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Zfp248Q640N4 576 aa15.79■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Gm5105Q8C6Y9 112 aa15.79■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Utp20Q5XG71 2788 aaKnown RBP15.78■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Trav7-5A0A0G2JFX6 112 aa15.78■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Shisa9Q9CZN4 424 aa15.78■□□□□ 0.12
Cdx1-201ENSMUST00000025521 RhohQ9D3G9 191 aa15.78■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Chd8Q09XV5 2582 aaKnown RBP15.78■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Ighv1-22A0A075B5U7 117 aa15.77■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Igkv4-81A0A0G2JEY5 119 aa15.77■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Gm10188Q3V432 135 aa15.77■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Prickle3Q80VL3 624 aa15.77■□□□□ 0.12
Cdx1-201ENSMUST00000025521 Ighv1-80A0A075B5Y3 117 aa15.77■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Ighv9-1A0A0B4J1P3 117 aa15.77■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Vmn1r63Q9EPT1 300 aa15.77■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Gm6904E9PVF1 202 aa15.76■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Tstd1E9PY03 133 aa15.76■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Odf1Q61999 247 aa15.76■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Mrpl32Q9DCI9 187 aaKnown RBP15.76■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Igkv4-57-1A0A075B5M4 119 aa15.75■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Gm28051J3QMA2 81 aa15.75■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Smad7O35253 426 aa15.75■□□□□ 0.11
Cdx1-201ENSMUST00000025521 NpyP57774 97 aa15.75■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Srsf1Q6PDM2 248 aaKnown RBP15.75■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Olfr761Q7TRJ0 323 aa15.75■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Tmem52Q9D702 196 aa15.75■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Abca2P41234 2434 aa15.75■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Samd5Q3V1H9 173 aa15.75■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Znhit3Q9CQK1 151 aa15.75■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Cnn3Q9DAW9 330 aaKnown RBP15.75■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Igkv4-70A0A0B4J1I5 116 aa15.74■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Trav19A0A0B4J1K4 119 aa15.74■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Fmc1Q9CR13 113 aa15.74■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Svep1A2AVA0 3567 aa15.73■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Abca12E9Q876 2595 aa15.73■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Ighv1-82A0A0G2JEU7 117 aa15.73■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Bsph1Q3UW26 133 aa15.73■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Krtap26-1Q9D7N2 215 aa15.73■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Psmb2Q9R1P3 201 aa15.73■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Armcx4E9PWM3 2356 aa15.73■□□□□ 0.11
Cdx1-201ENSMUST00000025521 OtogO55225 2910 aa15.73■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Trav6-4A0A075B6B4 115 aa15.72■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Ccl21aP84444 133 aa15.72■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Ccl21bP86792 133 aa15.72■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Ccl21cP86793 133 aa15.72■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Ube2cQ9D1C1 179 aa15.72■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Ighv1-16A0A075B5U1 98 aa15.72■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Trav14n-2A0A0G2JDF5 121 aa15.72■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Trav3-3Q5R1C3 114 aa15.72■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Ankhd1E9PUR0 2548 aaKnown RBP15.71■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Hectd1Q69ZR2 2618 aaKnown RBP15.71■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Spock3Q8BKV0 436 aa15.71■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Tctex1d4Q8CDY7 219 aa15.71■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Olfr1199Q8VF94 310 aa15.71■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Nit2Q9JHW2 276 aa15.71■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Cend1Q9JKC6 149 aa15.71■□□□□ 0.11
Cdx1-201ENSMUST00000025521 Ighv2-6A0A075B6A7 116 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Gm13030A2APQ6 143 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Vmn1r1E9PVR6 306 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Gm10521E9PZK0 135 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 P01756 117 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 P01757 117 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Lcn2P11672 200 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Q4KKZ1 196 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 SnrpcQ62241 159 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Ifi27l2bQ8VC49 283 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Npc2Q9Z0J0 149 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 FlncQ8VHX6 2726 aaKnown RBP15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Igkv4-69A0A0B4J1I6 116 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Igkv4-71A0A0G2JEH0 117 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 1520401A03RikA0A0J9YVH6 598 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Ccl17F6R5P4 103 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Fhl1P97447 280 aaKnown RBP15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Khdc1aQ3UWR2 166 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Klhdc1Q80YG3 406 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Fam213bQ9DB60 201 aa15.7■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Ighv1-9A0A0A6YW37 117 aa15.69■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Gm20458E9PXJ7 78 aa15.69■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Psmg4P0C7N9 123 aa15.69■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Tnfrsf9P20334 256 aa15.69■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Vmn1r216Q8R257 298 aa15.69■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Rnf185Q91YT2 192 aa15.69■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Tctex1d1Q9D5I4 173 aa15.69■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Igkv20-101-2A0A0G2JDU3 113 aa15.68■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Esp38A8R0X1 80 aa15.68■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Omt2bD3YX29 119 aa15.68■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Ighv1-62-3P01754 117 aa15.68■□□□□ 0.1
Cdx1-201ENSMUST00000025521 P01791 123 aa15.68■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Tmem160Q9D938 188 aa15.68■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Gm15294V9GXA7 121 aa15.68■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Olfr1245A0A1L1SQJ6 307 aa15.67■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Igll1P20764 209 aa15.67■□□□□ 0.1
Cdx1-201ENSMUST00000025521 H2-DMb1P35737 261 aa15.67■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Ighv8-6A0A0A6YXA3 118 aa15.67■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Gm21994F6T2D2 329 aa15.67■□□□□ 0.1
Cdx1-201ENSMUST00000025521 Gm5426J3QNM7 103 aa15.67■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 51.1 ms