RNA–Protein interactions for RNA: ENST00000640969.1

KCNMA1-293, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-293ENST00000640969 TPRXLQ17RH7 258 aa10.2□□□□□ -0.78
KCNMA1-293ENST00000640969 APCP25054 2843 aa10.19□□□□□ -0.78
KCNMA1-293ENST00000640969 HIVEP1P15822 2718 aa10.19□□□□□ -0.78
KCNMA1-293ENST00000640969 KMT2BQ9UMN6 2715 aaPredicted RBP10.18□□□□□ -0.78
KCNMA1-293ENST00000640969 KRTAP10-10P60014 251 aa10.18□□□□□ -0.78
KCNMA1-293ENST00000640969 REV3LO60673 3130 aa10.17□□□□□ -0.78
KCNMA1-293ENST00000640969 FREM2Q5SZK8 3169 aa10.17□□□□□ -0.78
KCNMA1-293ENST00000640969 ATMQ13315 3056 aa10.16□□□□□ -0.78
KCNMA1-293ENST00000640969 TENM4Q6N022 2769 aa10.15□□□□□ -0.78
KCNMA1-293ENST00000640969 KALRNO60229 2985 aa10.15□□□□□ -0.79
KCNMA1-293ENST00000640969 FRYLO94915 3013 aa10.15□□□□□ -0.79
KCNMA1-293ENST00000640969 COL12A1Q99715 3063 aa10.15□□□□□ -0.79
KCNMA1-293ENST00000640969 PRO2289Q9P1D8 64 aa10.08□□□□□ -0.8
KCNMA1-293ENST00000640969 UTP20O75691 2785 aaKnown RBP10.08□□□□□ -0.8
KCNMA1-293ENST00000640969 NIPBLQ6KC79 2804 aaeCLIP10.06□□□□□ -0.8
KCNMA1-293ENST00000640969 KRTAP13-3Q3SY46 172 aa10.06□□□□□ -0.8
KCNMA1-293ENST00000640969 DMXL2Q8TDJ6 3036 aa10.03□□□□□ -0.8
KCNMA1-293ENST00000640969 CDH23Q9H251 3354 aa10.01□□□□□ -0.81
KCNMA1-293ENST00000640969 CELSR3Q9NYQ7 3312 aa10□□□□□ -0.81
KCNMA1-293ENST00000640969 LAMA1P25391 3075 aa9.97□□□□□ -0.81
KCNMA1-293ENST00000640969 ASH1LQ9NR48 2969 aaKnown RBP9.94□□□□□ -0.82
KCNMA1-293ENST00000640969 ADGRG4Q8IZF6 3080 aa9.93□□□□□ -0.82
KCNMA1-293ENST00000640969 LRBAP50851 2863 aa9.91□□□□□ -0.82
KCNMA1-293ENST00000640969 ZZEF1O43149 2961 aa9.9□□□□□ -0.82
KCNMA1-293ENST00000640969 BOD1L1Q8NFC6 3051 aa9.89□□□□□ -0.83
KCNMA1-293ENST00000640969 CELSR2Q9HCU4 2923 aa9.86□□□□□ -0.83
KCNMA1-293ENST00000640969 KRTAP12-2P59991 146 aa9.85□□□□□ -0.83
KCNMA1-293ENST00000640969 SZT2Q5T011 3432 aa9.83□□□□□ -0.84
KCNMA1-293ENST00000640969 CRYBG3Q68DQ2 2970 aa9.83□□□□□ -0.84
KCNMA1-293ENST00000640969 NBEAQ8NFP9 2946 aa9.8□□□□□ -0.84
KCNMA1-293ENST00000640969 ZANQ9Y493 2812 aa9.76□□□□□ -0.85
KCNMA1-293ENST00000640969 DCHS2Q6V1P9 2916 aa9.74□□□□□ -0.85
KCNMA1-293ENST00000640969 EYSQ5T1H1 3165 aa9.74□□□□□ -0.85
KCNMA1-293ENST00000640969 VCANP13611 3396 aa9.73□□□□□ -0.85
KCNMA1-293ENST00000640969 COL6A3P12111 3177 aa9.72□□□□□ -0.85
KCNMA1-293ENST00000640969 KRTAP13-4Q3LI77 160 aa9.68□□□□□ -0.86
KCNMA1-293ENST00000640969 DNAH14Q0VDD8 3507 aa9.67□□□□□ -0.86
KCNMA1-293ENST00000640969 TENM3Q9P273 2699 aa9.64□□□□□ -0.87
KCNMA1-293ENST00000640969 CFAP47Q6ZTR5 3102 aa9.62□□□□□ -0.87
KCNMA1-293ENST00000640969 KRTAP12-1P59990 96 aa9.61□□□□□ -0.87
KCNMA1-293ENST00000640969 TNRC18O15417 2968 aaPredicted RBP9.58□□□□□ -0.88
KCNMA1-293ENST00000640969 NF1P21359 2839 aa9.53□□□□□ -0.88
KCNMA1-293ENST00000640969 TGP01266 2768 aa9.5□□□□□ -0.89
KCNMA1-293ENST00000640969 DMXL1Q9Y485 3027 aa9.49□□□□□ -0.89
KCNMA1-293ENST00000640969 TENM1Q9UKZ4 2725 aa9.49□□□□□ -0.89
KCNMA1-293ENST00000640969 KRTAP3-1Q9BYR8 98 aa9.45□□□□□ -0.9
KCNMA1-293ENST00000640969 FBN2P35556 2912 aa9.4□□□□□ -0.9
KCNMA1-293ENST00000640969 HRNRQ86YZ3 2850 aaPredicted RBP9.4□□□□□ -0.9
KCNMA1-293ENST00000640969 KRTAP15-1Q3LI76 137 aa9.38□□□□□ -0.91
KCNMA1-293ENST00000640969 TENM2Q9NT68 2774 aa9.37□□□□□ -0.91
KCNMA1-293ENST00000640969 MXRA5Q9NR99 2828 aa9.32□□□□□ -0.92
KCNMA1-293ENST00000640969 USP34Q70CQ2 3546 aa9.28□□□□□ -0.92
KCNMA1-293ENST00000640969 SPEGQ15772 3267 aa9.26□□□□□ -0.93
KCNMA1-293ENST00000640969 PKD1L1Q8TDX9 2849 aa9.22□□□□□ -0.93
KCNMA1-293ENST00000640969 KRTAP10-6P60371 365 aaPredicted RBP9.21□□□□□ -0.94
KCNMA1-293ENST00000640969 CELSR1Q9NYQ6 3014 aa9.17□□□□□ -0.94
KCNMA1-293ENST00000640969 LOC400499M0QZD8 3231 aa9.17□□□□□ -0.94
KCNMA1-293ENST00000640969 SPTBN5Q9NRC6 3674 aaKnown RBP9.17□□□□□ -0.94
KCNMA1-293ENST00000640969 MYO15AQ9UKN7 3530 aa9□□□□□ -0.97
KCNMA1-293ENST00000640969 DCHS1Q96JQ0 3298 aa9□□□□□ -0.97
KCNMA1-293ENST00000640969 VWFP04275 2813 aa8.97□□□□□ -0.97
KCNMA1-293ENST00000640969 INE1O15225 51 aa8.94□□□□□ -0.98
KCNMA1-293ENST00000640969 PDZD2O15018 2839 aa8.92□□□□□ -0.98
KCNMA1-293ENST00000640969 CRCT1Q9UGL9 99 aa8.86□□□□□ -0.99
KCNMA1-293ENST00000640969 KRTAP10-12P60413 245 aa8.86□□□□□ -0.99
KCNMA1-293ENST00000640969 KRTAP3-2Q9BYR7 98 aa8.84□□□□□ -0.99
KCNMA1-293ENST00000640969 WDFY3Q8IZQ1 3526 aa8.8□□□□□ -1
KCNMA1-293ENST00000640969 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
KCNMA1-293ENST00000640969 FBN1P35555 2871 aaKnown RBP8.78□□□□□ -1
KCNMA1-293ENST00000640969 MT1HL1P0DM35 61 aa8.77□□□□□ -1.01
KCNMA1-293ENST00000640969 SRRM2Q9UQ35 2752 aaKnown RBP8.76□□□□□ -1.01
KCNMA1-293ENST00000640969 RELNP78509 3460 aa8.74□□□□□ -1.01
KCNMA1-293ENST00000640969 OTOGQ6ZRI0 2925 aa8.72□□□□□ -1.01
KCNMA1-293ENST00000640969 KRTAP12-3P60328 96 aa8.61□□□□□ -1.03
KCNMA1-293ENST00000640969 NBPF19A0A087WUL8 3843 aa8.58□□□□□ -1.04
KCNMA1-293ENST00000640969 ASPMQ8IZT6 3477 aa8.55□□□□□ -1.04
KCNMA1-293ENST00000640969 ANK3Q12955 4377 aaKnown RBP8.55□□□□□ -1.04
KCNMA1-293ENST00000640969 ZFHX4Q86UP3 3567 aa8.54□□□□□ -1.04
KCNMA1-293ENST00000640969 LCE3AQ5TA76 89 aa8.54□□□□□ -1.04
KCNMA1-293ENST00000640969 KRTAP23-1A1A580 65 aa8.46□□□□□ -1.05
KCNMA1-293ENST00000640969 FBN3Q75N90 2809 aa8.46□□□□□ -1.06
KCNMA1-293ENST00000640969 MEGF8Q7Z7M0 2845 aa8.45□□□□□ -1.06
KCNMA1-293ENST00000640969 ZFHX3Q15911 3703 aa8.44□□□□□ -1.06
KCNMA1-293ENST00000640969 KRTAP10-4P60372 401 aaPredicted RBP8.44□□□□□ -1.06
KCNMA1-293ENST00000640969 KRTAP4-5Q9BYR2 181 aa8.42□□□□□ -1.06
KCNMA1-293ENST00000640969 CSMD1Q96PZ7 3565 aa8.42□□□□□ -1.06
KCNMA1-293ENST00000640969 LAMA5O15230 3695 aa8.36□□□□□ -1.07
KCNMA1-293ENST00000640969 LORP23490 312 aaPredicted RBP8.35□□□□□ -1.07
KCNMA1-293ENST00000640969 COL7A1Q02388 2944 aa8.29□□□□□ -1.08
KCNMA1-293ENST00000640969 HUWE1Q7Z6Z7 4374 aaKnown RBP8.25□□□□□ -1.09
KCNMA1-293ENST00000640969 KRTAP10-5P60370 271 aa8.22□□□□□ -1.09
KCNMA1-293ENST00000640969 MUC3AQ02505 3323 aa8.2□□□□□ -1.1
KCNMA1-293ENST00000640969 ALMS1Q8TCU4 4167 aa8.19□□□□□ -1.1
KCNMA1-293ENST00000640969 SMG1Q96Q15 3661 aaKnown RBP8.12□□□□□ -1.11
KCNMA1-293ENST00000640969 KRTAP8-1Q8IUC2 63 aa8.12□□□□□ -1.11
KCNMA1-293ENST00000640969 TRRAPQ9Y4A5 3859 aa8.04□□□□□ -1.12
KCNMA1-293ENST00000640969 CSMD2Q7Z408 3487 aa7.99□□□□□ -1.13
KCNMA1-293ENST00000640969 SVEP1Q4LDE5 3571 aa7.95□□□□□ -1.14
KCNMA1-293ENST00000640969 DMDP11532 3685 aa7.94□□□□□ -1.14
KCNMA1-293ENST00000640969 SPENQ96T58 3664 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms