RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 APCP25054 2843 aa9.98□□□□□ -0.81
SCARB2-213ENST00000638680 TNP1P09430 55 aa9.98□□□□□ -0.81
SCARB2-213ENST00000638680 C10orf95Q9H7T3 257 aa9.98□□□□□ -0.81
SCARB2-213ENST00000638680 ASH1LQ9NR48 2969 aaKnown RBP9.93□□□□□ -0.82
SCARB2-213ENST00000638680 ATMQ13315 3056 aa9.92□□□□□ -0.82
SCARB2-213ENST00000638680 DMXL2Q8TDJ6 3036 aa9.91□□□□□ -0.82
SCARB2-213ENST00000638680 H0YAA0 97 aa9.9□□□□□ -0.82
SCARB2-213ENST00000638680 BOD1L1Q8NFC6 3051 aa9.9□□□□□ -0.82
SCARB2-213ENST00000638680 TACC2O95359 2948 aa9.9□□□□□ -0.83
SCARB2-213ENST00000638680 UTP20O75691 2785 aaKnown RBP9.9□□□□□ -0.83
SCARB2-213ENST00000638680 ADGRG4Q8IZF6 3080 aa9.88□□□□□ -0.83
SCARB2-213ENST00000638680 HIVEP1P15822 2718 aa9.85□□□□□ -0.83
SCARB2-213ENST00000638680 KRTAP1-4P0C5Y4 121 aa9.84□□□□□ -0.83
SCARB2-213ENST00000638680 FRYLO94915 3013 aa9.82□□□□□ -0.84
SCARB2-213ENST00000638680 COL12A1Q99715 3063 aa9.8□□□□□ -0.84
SCARB2-213ENST00000638680 KMT2BQ9UMN6 2715 aaPredicted RBP9.77□□□□□ -0.85
SCARB2-213ENST00000638680 SPTBN5Q9NRC6 3674 aaKnown RBP9.77□□□□□ -0.85
SCARB2-213ENST00000638680 XP32Q5T750 250 aa9.76□□□□□ -0.85
SCARB2-213ENST00000638680 PP632Q6XCG6 107 aa9.75□□□□□ -0.85
SCARB2-213ENST00000638680 CFAP47Q6ZTR5 3102 aa9.75□□□□□ -0.85
SCARB2-213ENST00000638680 FLNCQ14315 2725 aa9.73□□□□□ -0.85
SCARB2-213ENST00000638680 SPEGQ15772 3267 aa9.7□□□□□ -0.86
SCARB2-213ENST00000638680 P0C880 135 aa9.69□□□□□ -0.86
SCARB2-213ENST00000638680 REV3LO60673 3130 aa9.68□□□□□ -0.86
SCARB2-213ENST00000638680 ZZEF1O43149 2961 aa9.66□□□□□ -0.86
SCARB2-213ENST00000638680 KRTAP10-8P60410 259 aa9.61□□□□□ -0.87
SCARB2-213ENST00000638680 A0A1B0GVY2 172 aa9.6□□□□□ -0.87
SCARB2-213ENST00000638680 CELSR2Q9HCU4 2923 aa9.6□□□□□ -0.87
SCARB2-213ENST00000638680 USP34Q70CQ2 3546 aa9.57□□□□□ -0.88
SCARB2-213ENST00000638680 NIPBLQ6KC79 2804 aaeCLIP9.56□□□□□ -0.88
SCARB2-213ENST00000638680 CRYBG3Q68DQ2 2970 aa9.56□□□□□ -0.88
SCARB2-213ENST00000638680 EYSQ5T1H1 3165 aa9.55□□□□□ -0.88
SCARB2-213ENST00000638680 DCHS2Q6V1P9 2916 aa9.47□□□□□ -0.89
SCARB2-213ENST00000638680 KRTAP13-3Q3SY46 172 aa9.46□□□□□ -0.9
SCARB2-213ENST00000638680 TPRXLQ17RH7 258 aa9.43□□□□□ -0.9
SCARB2-213ENST00000638680 MYO15AQ9UKN7 3530 aa9.42□□□□□ -0.9
SCARB2-213ENST00000638680 HRNRQ86YZ3 2850 aaPredicted RBP9.42□□□□□ -0.9
SCARB2-213ENST00000638680 ZANQ9Y493 2812 aa9.41□□□□□ -0.9
SCARB2-213ENST00000638680 DMXL1Q9Y485 3027 aa9.4□□□□□ -0.91
SCARB2-213ENST00000638680 TNRC18O15417 2968 aaPredicted RBP9.39□□□□□ -0.91
SCARB2-213ENST00000638680 TENM4Q6N022 2769 aa9.38□□□□□ -0.91
SCARB2-213ENST00000638680 KRTAP21-3Q3LHN1 58 aa9.36□□□□□ -0.91
SCARB2-213ENST00000638680 LOC400499M0QZD8 3231 aa9.36□□□□□ -0.91
SCARB2-213ENST00000638680 KRTAP12-2P59991 146 aa9.29□□□□□ -0.92
SCARB2-213ENST00000638680 KRTAP10-10P60014 251 aa9.29□□□□□ -0.92
SCARB2-213ENST00000638680 FBN2P35556 2912 aa9.28□□□□□ -0.92
SCARB2-213ENST00000638680 TGP01266 2768 aa9.23□□□□□ -0.93
SCARB2-213ENST00000638680 NF1P21359 2839 aa9.18□□□□□ -0.94
SCARB2-213ENST00000638680 PRO2289Q9P1D8 64 aa9.14□□□□□ -0.95
SCARB2-213ENST00000638680 WDFY3Q8IZQ1 3526 aa9.12□□□□□ -0.95
SCARB2-213ENST00000638680 CELSR1Q9NYQ6 3014 aa9.09□□□□□ -0.95
SCARB2-213ENST00000638680 KRTAP12-1P59990 96 aa9.07□□□□□ -0.96
SCARB2-213ENST00000638680 TENM1Q9UKZ4 2725 aa9.06□□□□□ -0.96
SCARB2-213ENST00000638680 RELNP78509 3460 aa9.05□□□□□ -0.96
SCARB2-213ENST00000638680 KRTAP13-4Q3LI77 160 aa9.04□□□□□ -0.96
SCARB2-213ENST00000638680 KRTAP3-1Q9BYR8 98 aa9.03□□□□□ -0.96
SCARB2-213ENST00000638680 ASPMQ8IZT6 3477 aa9.02□□□□□ -0.97
SCARB2-213ENST00000638680 TENM3Q9P273 2699 aa9□□□□□ -0.97
SCARB2-213ENST00000638680 TENM2Q9NT68 2774 aa8.99□□□□□ -0.97
SCARB2-213ENST00000638680 ZFHX4Q86UP3 3567 aa8.98□□□□□ -0.97
SCARB2-213ENST00000638680 DCHS1Q96JQ0 3298 aa8.91□□□□□ -0.98
SCARB2-213ENST00000638680 MXRA5Q9NR99 2828 aa8.89□□□□□ -0.99
SCARB2-213ENST00000638680 LAMA5O15230 3695 aa8.84□□□□□ -0.99
SCARB2-213ENST00000638680 CSMD1Q96PZ7 3565 aa8.83□□□□□ -1
SCARB2-213ENST00000638680 KRTAP10-6P60371 365 aaPredicted RBP8.79□□□□□ -1
SCARB2-213ENST00000638680 PDZD2O15018 2839 aa8.72□□□□□ -1.01
SCARB2-213ENST00000638680 NBPF19A0A087WUL8 3843 aa8.68□□□□□ -1.02
SCARB2-213ENST00000638680 DMDP11532 3685 aa8.67□□□□□ -1.02
SCARB2-213ENST00000638680 PKD1L1Q8TDX9 2849 aa8.67□□□□□ -1.02
SCARB2-213ENST00000638680 SMG1Q96Q15 3661 aaKnown RBP8.67□□□□□ -1.02
SCARB2-213ENST00000638680 VWFP04275 2813 aa8.64□□□□□ -1.03
SCARB2-213ENST00000638680 KRTAP15-1Q3LI76 137 aa8.63□□□□□ -1.03
SCARB2-213ENST00000638680 SVEP1Q4LDE5 3571 aa8.5□□□□□ -1.05
SCARB2-213ENST00000638680 ANK3Q12955 4377 aaKnown RBP8.46□□□□□ -1.05
SCARB2-213ENST00000638680 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.05
SCARB2-213ENST00000638680 KRTAP3-3Q9BYR6 98 aa8.43□□□□□ -1.06
SCARB2-213ENST00000638680 FBN1P35555 2871 aaKnown RBP8.37□□□□□ -1.07
SCARB2-213ENST00000638680 MUC3AQ02505 3323 aa8.37□□□□□ -1.07
SCARB2-213ENST00000638680 FBN3Q75N90 2809 aa8.35□□□□□ -1.07
SCARB2-213ENST00000638680 INE1O15225 51 aa8.32□□□□□ -1.08
SCARB2-213ENST00000638680 ZFHX3Q15911 3703 aa8.32□□□□□ -1.08
SCARB2-213ENST00000638680 MEGF8Q7Z7M0 2845 aa8.31□□□□□ -1.08
SCARB2-213ENST00000638680 OTOGQ6ZRI0 2925 aa8.3□□□□□ -1.08
SCARB2-213ENST00000638680 CUBNO60494 3623 aa8.3□□□□□ -1.08
SCARB2-213ENST00000638680 CSMD2Q7Z408 3487 aa8.27□□□□□ -1.09
SCARB2-213ENST00000638680 SPENQ96T58 3664 aaKnown RBP8.26□□□□□ -1.09
SCARB2-213ENST00000638680 MT1HL1P0DM35 61 aa8.25□□□□□ -1.09
SCARB2-213ENST00000638680 KRTAP10-12P60413 245 aa8.18□□□□□ -1.1
SCARB2-213ENST00000638680 SRRM2Q9UQ35 2752 aaKnown RBP8.16□□□□□ -1.1
SCARB2-213ENST00000638680 TRRAPQ9Y4A5 3859 aa8.14□□□□□ -1.11
SCARB2-213ENST00000638680 HUWE1Q7Z6Z7 4374 aaKnown RBP8.11□□□□□ -1.11
SCARB2-213ENST00000638680 BSNQ9UPA5 3926 aa8.09□□□□□ -1.11
SCARB2-213ENST00000638680 KRTAP10-4P60372 401 aaPredicted RBP8.06□□□□□ -1.12
SCARB2-213ENST00000638680 CRCT1Q9UGL9 99 aa8.05□□□□□ -1.12
SCARB2-213ENST00000638680 COL7A1Q02388 2944 aa8.04□□□□□ -1.12
SCARB2-213ENST00000638680 KRTAP12-3P60328 96 aa8□□□□□ -1.13
SCARB2-213ENST00000638680 LCE3AQ5TA76 89 aa7.98□□□□□ -1.13
SCARB2-213ENST00000638680 KRTAP23-1A1A580 65 aa7.95□□□□□ -1.14
SCARB2-213ENST00000638680 LORP23490 312 aaPredicted RBP7.94□□□□□ -1.14
SCARB2-213ENST00000638680 VPS13CQ709C8 3753 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms