RNA–Protein interactions for RNA: ENST00000637651.1

EPB41L3-236, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 5

Gene EPB41L3, Length 6,962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-236ENST00000637651 AKAP13Q12802 2813 aa6.76□□□□□ -1.33
EPB41L3-236ENST00000637651 CHD6Q8TD26 2715 aa6.74□□□□□ -1.33
EPB41L3-236ENST00000637651 UNC79Q9P2D8 2635 aa6.74□□□□□ -1.33
EPB41L3-236ENST00000637651 KRTAP13-3Q3SY46 172 aa6.74□□□□□ -1.33
EPB41L3-236ENST00000637651 KRTAP1-4P0C5Y4 121 aa6.73□□□□□ -1.33
EPB41L3-236ENST00000637651 CELSR3Q9NYQ7 3312 aa6.72□□□□□ -1.33
EPB41L3-236ENST00000637651 SZT2Q5T011 3432 aa6.72□□□□□ -1.33
EPB41L3-236ENST00000637651 ITPR1Q14643 2758 aa6.68□□□□□ -1.34
EPB41L3-236ENST00000637651 SPEGQ15772 3267 aa6.68□□□□□ -1.34
EPB41L3-236ENST00000637651 NOTCH1P46531 2555 aa6.67□□□□□ -1.34
EPB41L3-236ENST00000637651 SETXQ7Z333 2677 aaKnown RBP6.67□□□□□ -1.34
EPB41L3-236ENST00000637651 DMXL2Q8TDJ6 3036 aa6.66□□□□□ -1.34
EPB41L3-236ENST00000637651 NBEAL2Q6ZNJ1 2754 aa6.66□□□□□ -1.34
EPB41L3-236ENST00000637651 BOD1L1Q8NFC6 3051 aa6.65□□□□□ -1.34
EPB41L3-236ENST00000637651 TNRC18O15417 2968 aaPredicted RBP6.63□□□□□ -1.35
EPB41L3-236ENST00000637651 FLNCQ14315 2725 aa6.63□□□□□ -1.35
EPB41L3-236ENST00000637651 COL6A5A8TX70 2615 aa6.62□□□□□ -1.35
EPB41L3-236ENST00000637651 BAHCC1Q9P281 2608 aa6.62□□□□□ -1.35
EPB41L3-236ENST00000637651 TEP1Q99973 2627 aaKnown RBP6.6□□□□□ -1.35
EPB41L3-236ENST00000637651 REV3LO60673 3130 aa6.6□□□□□ -1.35
EPB41L3-236ENST00000637651 ATMQ13315 3056 aa6.6□□□□□ -1.35
EPB41L3-236ENST00000637651 ZZEF1O43149 2961 aa6.59□□□□□ -1.35
EPB41L3-236ENST00000637651 KRTAP13-4Q3LI77 160 aa6.54□□□□□ -1.36
EPB41L3-236ENST00000637651 CFAP47Q6ZTR5 3102 aa6.54□□□□□ -1.36
EPB41L3-236ENST00000637651 LRBAP50851 2863 aa6.54□□□□□ -1.36
EPB41L3-236ENST00000637651 IGSF10Q6WRI0 2623 aa6.51□□□□□ -1.37
EPB41L3-236ENST00000637651 ZANQ9Y493 2812 aa6.51□□□□□ -1.37
EPB41L3-236ENST00000637651 UBR5O95071 2799 aaPredicted RBP6.49□□□□□ -1.37
EPB41L3-236ENST00000637651 HRNRQ86YZ3 2850 aaPredicted RBP6.47□□□□□ -1.37
EPB41L3-236ENST00000637651 UTP20O75691 2785 aaKnown RBP6.46□□□□□ -1.38
EPB41L3-236ENST00000637651 ASH1LQ9NR48 2969 aaKnown RBP6.46□□□□□ -1.38
EPB41L3-236ENST00000637651 KMT2BQ9UMN6 2715 aaPredicted RBP6.44□□□□□ -1.38
EPB41L3-236ENST00000637651 LOC400499M0QZD8 3231 aa6.43□□□□□ -1.38
EPB41L3-236ENST00000637651 COL12A1Q99715 3063 aa6.43□□□□□ -1.38
EPB41L3-236ENST00000637651 CRYBG3Q68DQ2 2970 aa6.42□□□□□ -1.38
EPB41L3-236ENST00000637651 COL6A3P12111 3177 aa6.4□□□□□ -1.38
EPB41L3-236ENST00000637651 NIPBLQ6KC79 2804 aaeCLIP6.39□□□□□ -1.39
EPB41L3-236ENST00000637651 APCP25054 2843 aa6.38□□□□□ -1.39
EPB41L3-236ENST00000637651 NF1P21359 2839 aa6.38□□□□□ -1.39
EPB41L3-236ENST00000637651 ITPR2Q14571 2701 aa6.36□□□□□ -1.39
EPB41L3-236ENST00000637651 DMXL1Q9Y485 3027 aa6.36□□□□□ -1.39
EPB41L3-236ENST00000637651 KRTAP10-6P60371 365 aaPredicted RBP6.35□□□□□ -1.39
EPB41L3-236ENST00000637651 MXRA5Q9NR99 2828 aa6.32□□□□□ -1.4
EPB41L3-236ENST00000637651 USP34Q70CQ2 3546 aa6.32□□□□□ -1.4
EPB41L3-236ENST00000637651 EYSQ5T1H1 3165 aa6.3□□□□□ -1.4
EPB41L3-236ENST00000637651 MYO15AQ9UKN7 3530 aa6.3□□□□□ -1.4
EPB41L3-236ENST00000637651 FBN2P35556 2912 aa6.29□□□□□ -1.4
EPB41L3-236ENST00000637651 SPTBN5Q9NRC6 3674 aaKnown RBP6.29□□□□□ -1.4
EPB41L3-236ENST00000637651 KRTAP12-1P59990 96 aa6.29□□□□□ -1.4
EPB41L3-236ENST00000637651 NSD1Q96L73 2696 aaPredicted RBP6.27□□□□□ -1.4
EPB41L3-236ENST00000637651 CELSR2Q9HCU4 2923 aa6.26□□□□□ -1.41
EPB41L3-236ENST00000637651 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
EPB41L3-236ENST00000637651 DCHS1Q96JQ0 3298 aa6.24□□□□□ -1.41
EPB41L3-236ENST00000637651 DCHS2Q6V1P9 2916 aa6.22□□□□□ -1.41
EPB41L3-236ENST00000637651 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
EPB41L3-236ENST00000637651 HIVEP1P15822 2718 aa6.15□□□□□ -1.43
EPB41L3-236ENST00000637651 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
EPB41L3-236ENST00000637651 INE1O15225 51 aa6.12□□□□□ -1.43
EPB41L3-236ENST00000637651 WDFY3Q8IZQ1 3526 aa6.07□□□□□ -1.44
EPB41L3-236ENST00000637651 TENM3Q9P273 2699 aa6.02□□□□□ -1.44
EPB41L3-236ENST00000637651 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
EPB41L3-236ENST00000637651 ZFHX4Q86UP3 3567 aa5.99□□□□□ -1.45
EPB41L3-236ENST00000637651 CELSR1Q9NYQ6 3014 aa5.98□□□□□ -1.45
EPB41L3-236ENST00000637651 VWFP04275 2813 aa5.96□□□□□ -1.46
EPB41L3-236ENST00000637651 RELNP78509 3460 aa5.95□□□□□ -1.46
EPB41L3-236ENST00000637651 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
EPB41L3-236ENST00000637651 PDZD2O15018 2839 aa5.93□□□□□ -1.46
EPB41L3-236ENST00000637651 SMG1Q96Q15 3661 aaKnown RBP5.92□□□□□ -1.46
EPB41L3-236ENST00000637651 ASPMQ8IZT6 3477 aa5.91□□□□□ -1.46
EPB41L3-236ENST00000637651 TENM1Q9UKZ4 2725 aa5.9□□□□□ -1.46
EPB41L3-236ENST00000637651 CSMD1Q96PZ7 3565 aa5.89□□□□□ -1.47
EPB41L3-236ENST00000637651 MUC3AQ02505 3323 aa5.88□□□□□ -1.47
EPB41L3-236ENST00000637651 TENM4Q6N022 2769 aa5.88□□□□□ -1.47
EPB41L3-236ENST00000637651 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
EPB41L3-236ENST00000637651 TENM2Q9NT68 2774 aa5.86□□□□□ -1.47
EPB41L3-236ENST00000637651 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
EPB41L3-236ENST00000637651 LAMA5O15230 3695 aa5.83□□□□□ -1.48
EPB41L3-236ENST00000637651 TGP01266 2768 aa5.81□□□□□ -1.48
EPB41L3-236ENST00000637651 DMDP11532 3685 aa5.78□□□□□ -1.48
EPB41L3-236ENST00000637651 PKD1L1Q8TDX9 2849 aa5.76□□□□□ -1.49
EPB41L3-236ENST00000637651 SRRM2Q9UQ35 2752 aaKnown RBP5.73□□□□□ -1.49
EPB41L3-236ENST00000637651 SVEP1Q4LDE5 3571 aa5.73□□□□□ -1.49
EPB41L3-236ENST00000637651 KRTAP4-5Q9BYR2 181 aa5.69□□□□□ -1.5
EPB41L3-236ENST00000637651 ZFHX3Q15911 3703 aa5.67□□□□□ -1.5
EPB41L3-236ENST00000637651 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
EPB41L3-236ENST00000637651 SPENQ96T58 3664 aaKnown RBP5.67□□□□□ -1.5
EPB41L3-236ENST00000637651 FBN1P35555 2871 aaKnown RBP5.63□□□□□ -1.51
EPB41L3-236ENST00000637651 OTOGQ6ZRI0 2925 aa5.62□□□□□ -1.51
EPB41L3-236ENST00000637651 MT1HL1P0DM35 61 aa5.62□□□□□ -1.51
EPB41L3-236ENST00000637651 CUBNO60494 3623 aa5.61□□□□□ -1.51
EPB41L3-236ENST00000637651 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.51
EPB41L3-236ENST00000637651 NBPF19A0A087WUL8 3843 aa5.46□□□□□ -1.54
EPB41L3-236ENST00000637651 FBN3Q75N90 2809 aa5.42□□□□□ -1.54
EPB41L3-236ENST00000637651 KRTAP3-3Q9BYR6 98 aa5.42□□□□□ -1.54
EPB41L3-236ENST00000637651 KRTAP3-2Q9BYR7 98 aa5.42□□□□□ -1.54
EPB41L3-236ENST00000637651 SPRR2EP22531 72 aa5.4□□□□□ -1.54
EPB41L3-236ENST00000637651 SPRR2BP35325 72 aa5.4□□□□□ -1.54
EPB41L3-236ENST00000637651 SPRR2AP35326 72 aa5.4□□□□□ -1.54
EPB41L3-236ENST00000637651 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
EPB41L3-236ENST00000637651 BSNQ9UPA5 3926 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms