RNA–Protein interactions for RNA: ENST00000637479.1

CACNB4-252, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 4,858 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-252ENST00000637479 NIPBLQ6KC79 2804 aaeCLIP4.71□□□□□ -1.66
CACNB4-252ENST00000637479 TRIOO75962 3097 aa4.7□□□□□ -1.66
CACNB4-252ENST00000637479 TGP01266 2768 aa4.7□□□□□ -1.66
CACNB4-252ENST00000637479 LAMA2P24043 3122 aaKnown RBP4.69□□□□□ -1.66
CACNB4-252ENST00000637479 KRTAP3-1Q9BYR8 98 aa4.69□□□□□ -1.66
CACNB4-252ENST00000637479 HTTP42858 3142 aa4.69□□□□□ -1.66
CACNB4-252ENST00000637479 ASH1LQ9NR48 2969 aaKnown RBP4.67□□□□□ -1.66
CACNB4-252ENST00000637479 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
CACNB4-252ENST00000637479 A0A1B0GVY2 172 aa4.66□□□□□ -1.66
CACNB4-252ENST00000637479 HIVEP1P15822 2718 aa4.66□□□□□ -1.66
CACNB4-252ENST00000637479 FREM2Q5SZK8 3169 aa4.65□□□□□ -1.66
CACNB4-252ENST00000637479 WDFY4Q6ZS81 3184 aa4.62□□□□□ -1.67
CACNB4-252ENST00000637479 PRUNE2Q8WUY3 3088 aa4.61□□□□□ -1.67
CACNB4-252ENST00000637479 VPS13AQ96RL7 3174 aa4.6□□□□□ -1.67
CACNB4-252ENST00000637479 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
CACNB4-252ENST00000637479 ZZEF1O43149 2961 aa4.57□□□□□ -1.68
CACNB4-252ENST00000637479 MKI67P46013 3256 aaKnown RBP4.54□□□□□ -1.68
CACNB4-252ENST00000637479 LAMA1P25391 3075 aa4.53□□□□□ -1.68
CACNB4-252ENST00000637479 FLNCQ14315 2725 aa4.52□□□□□ -1.69
CACNB4-252ENST00000637479 DMXL2Q8TDJ6 3036 aa4.51□□□□□ -1.69
CACNB4-252ENST00000637479 CELSR2Q9HCU4 2923 aa4.51□□□□□ -1.69
CACNB4-252ENST00000637479 RANBP2P49792 3224 aaKnown RBP4.51□□□□□ -1.69
CACNB4-252ENST00000637479 ADGRG4Q8IZF6 3080 aa4.5□□□□□ -1.69
CACNB4-252ENST00000637479 FRYLO94915 3013 aa4.5□□□□□ -1.69
CACNB4-252ENST00000637479 TACC2O95359 2948 aa4.48□□□□□ -1.69
CACNB4-252ENST00000637479 UNC80Q8N2C7 3258 aa4.48□□□□□ -1.69
CACNB4-252ENST00000637479 KRTAP3-2Q9BYR7 98 aa4.47□□□□□ -1.69
CACNB4-252ENST00000637479 ATMQ13315 3056 aa4.46□□□□□ -1.7
CACNB4-252ENST00000637479 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
CACNB4-252ENST00000637479 DCHS2Q6V1P9 2916 aa4.44□□□□□ -1.7
CACNB4-252ENST00000637479 HRNRQ86YZ3 2850 aaPredicted RBP4.43□□□□□ -1.7
CACNB4-252ENST00000637479 TENM2Q9NT68 2774 aa4.43□□□□□ -1.7
CACNB4-252ENST00000637479 COL12A1Q99715 3063 aa4.43□□□□□ -1.7
CACNB4-252ENST00000637479 TENM3Q9P273 2699 aa4.41□□□□□ -1.7
CACNB4-252ENST00000637479 ZANQ9Y493 2812 aa4.39□□□□□ -1.71
CACNB4-252ENST00000637479 KRTAP3-3Q9BYR6 98 aa4.39□□□□□ -1.71
CACNB4-252ENST00000637479 CELSR3Q9NYQ7 3312 aa4.39□□□□□ -1.71
CACNB4-252ENST00000637479 TNRC18O15417 2968 aaPredicted RBP4.38□□□□□ -1.71
CACNB4-252ENST00000637479 NF1P21359 2839 aa4.37□□□□□ -1.71
CACNB4-252ENST00000637479 LAMA3Q16787 3333 aa4.37□□□□□ -1.71
CACNB4-252ENST00000637479 BOD1L1Q8NFC6 3051 aa4.35□□□□□ -1.71
CACNB4-252ENST00000637479 TENM1Q9UKZ4 2725 aa4.34□□□□□ -1.71
CACNB4-252ENST00000637479 TENM4Q6N022 2769 aa4.32□□□□□ -1.72
CACNB4-252ENST00000637479 FBN2P35556 2912 aa4.32□□□□□ -1.72
CACNB4-252ENST00000637479 REV3LO60673 3130 aa4.31□□□□□ -1.72
CACNB4-252ENST00000637479 XIRP2A4UGR9 3374 aa4.3□□□□□ -1.72
CACNB4-252ENST00000637479 PDZD2O15018 2839 aa4.28□□□□□ -1.72
CACNB4-252ENST00000637479 COL6A3P12111 3177 aa4.25□□□□□ -1.73
CACNB4-252ENST00000637479 VCANP13611 3396 aa4.24□□□□□ -1.73
CACNB4-252ENST00000637479 DMXL1Q9Y485 3027 aa4.24□□□□□ -1.73
CACNB4-252ENST00000637479 CELSR1Q9NYQ6 3014 aa4.24□□□□□ -1.73
CACNB4-252ENST00000637479 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
CACNB4-252ENST00000637479 BRCA2P51587 3418 aa4.21□□□□□ -1.74
CACNB4-252ENST00000637479 MXRA5Q9NR99 2828 aa4.21□□□□□ -1.74
CACNB4-252ENST00000637479 DNAH14Q0VDD8 3507 aa4.2□□□□□ -1.74
CACNB4-252ENST00000637479 CFAP47Q6ZTR5 3102 aa4.2□□□□□ -1.74
CACNB4-252ENST00000637479 CRYBG3Q68DQ2 2970 aa4.19□□□□□ -1.74
CACNB4-252ENST00000637479 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
CACNB4-252ENST00000637479 EYSQ5T1H1 3165 aa4.17□□□□□ -1.74
CACNB4-252ENST00000637479 CDH23Q9H251 3354 aa4.15□□□□□ -1.75
CACNB4-252ENST00000637479 PKD1L1Q8TDX9 2849 aa4.13□□□□□ -1.75
CACNB4-252ENST00000637479 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
CACNB4-252ENST00000637479 SRRM2Q9UQ35 2752 aaKnown RBP4.12□□□□□ -1.75
CACNB4-252ENST00000637479 MEGF8Q7Z7M0 2845 aa4.06□□□□□ -1.76
CACNB4-252ENST00000637479 FBN3Q75N90 2809 aa4.03□□□□□ -1.76
CACNB4-252ENST00000637479 SZT2Q5T011 3432 aa4.02□□□□□ -1.77
CACNB4-252ENST00000637479 MT1HL1P0DM35 61 aa4.02□□□□□ -1.77
CACNB4-252ENST00000637479 ZFHX3Q15911 3703 aa3.99□□□□□ -1.77
CACNB4-252ENST00000637479 USP34Q70CQ2 3546 aa3.98□□□□□ -1.77
CACNB4-252ENST00000637479 LORP23490 312 aaPredicted RBP3.97□□□□□ -1.77
CACNB4-252ENST00000637479 KRTAP10-4P60372 401 aaPredicted RBP3.96□□□□□ -1.77
CACNB4-252ENST00000637479 VWFP04275 2813 aa3.96□□□□□ -1.78
CACNB4-252ENST00000637479 SPEGQ15772 3267 aa3.96□□□□□ -1.78
CACNB4-252ENST00000637479 CRCT1Q9UGL9 99 aa3.93□□□□□ -1.78
CACNB4-252ENST00000637479 LOC400499M0QZD8 3231 aa3.92□□□□□ -1.78
CACNB4-252ENST00000637479 DCHS1Q96JQ0 3298 aa3.89□□□□□ -1.79
CACNB4-252ENST00000637479 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
CACNB4-252ENST00000637479 ALMS1Q8TCU4 4167 aa3.84□□□□□ -1.79
CACNB4-252ENST00000637479 WDFY3Q8IZQ1 3526 aa3.82□□□□□ -1.8
CACNB4-252ENST00000637479 COL7A1Q02388 2944 aa3.81□□□□□ -1.8
CACNB4-252ENST00000637479 SPTBN5Q9NRC6 3674 aaKnown RBP3.77□□□□□ -1.81
CACNB4-252ENST00000637479 ZFHX4Q86UP3 3567 aa3.76□□□□□ -1.81
CACNB4-252ENST00000637479 MYO15AQ9UKN7 3530 aa3.76□□□□□ -1.81
CACNB4-252ENST00000637479 ANK3Q12955 4377 aaKnown RBP3.75□□□□□ -1.81
CACNB4-252ENST00000637479 FBN1P35555 2871 aaKnown RBP3.75□□□□□ -1.81
CACNB4-252ENST00000637479 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
CACNB4-252ENST00000637479 CSMD1Q96PZ7 3565 aa3.75□□□□□ -1.81
CACNB4-252ENST00000637479 KRTAP8-1Q8IUC2 63 aa3.74□□□□□ -1.81
CACNB4-252ENST00000637479 HUWE1Q7Z6Z7 4374 aaKnown RBP3.72□□□□□ -1.81
CACNB4-252ENST00000637479 SPRR2GQ9BYE4 73 aa3.71□□□□□ -1.82
CACNB4-252ENST00000637479 DNAH2Q9P225 4427 aa3.7□□□□□ -1.82
CACNB4-252ENST00000637479 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
CACNB4-252ENST00000637479 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
CACNB4-252ENST00000637479 OTOGQ6ZRI0 2925 aa3.68□□□□□ -1.82
CACNB4-252ENST00000637479 DNAH11Q96DT5 4516 aa3.67□□□□□ -1.82
CACNB4-252ENST00000637479 RELNP78509 3460 aa3.67□□□□□ -1.82
CACNB4-252ENST00000637479 DNAH10Q8IVF4 4471 aa3.61□□□□□ -1.83
CACNB4-252ENST00000637479 KRTAP19-5Q3LI72 72 aa3.58□□□□□ -1.84
CACNB4-252ENST00000637479 SMG1Q96Q15 3661 aaKnown RBP3.56□□□□□ -1.84
CACNB4-252ENST00000637479 KRTAP4-1Q9BYQ7 146 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms