RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
SMARCA2-258ENST00000637103 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
SMARCA2-258ENST00000637103 NBEAQ8NFP9 2946 aa5.5□□□□□ -1.53
SMARCA2-258ENST00000637103 FREM2Q5SZK8 3169 aa5.5□□□□□ -1.53
SMARCA2-258ENST00000637103 RANBP2P49792 3224 aaKnown RBP5.5□□□□□ -1.53
SMARCA2-258ENST00000637103 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
SMARCA2-258ENST00000637103 VPS13AQ96RL7 3174 aa5.49□□□□□ -1.53
SMARCA2-258ENST00000637103 UNC80Q8N2C7 3258 aa5.48□□□□□ -1.53
SMARCA2-258ENST00000637103 HIVEP1P15822 2718 aa5.48□□□□□ -1.53
SMARCA2-258ENST00000637103 KRTAP21-3Q3LHN1 58 aa5.48□□□□□ -1.53
SMARCA2-258ENST00000637103 LRBAP50851 2863 aa5.48□□□□□ -1.53
SMARCA2-258ENST00000637103 ASH1LQ9NR48 2969 aaKnown RBP5.45□□□□□ -1.54
SMARCA2-258ENST00000637103 INE1O15225 51 aa5.45□□□□□ -1.54
SMARCA2-258ENST00000637103 NIPBLQ6KC79 2804 aaeCLIP5.44□□□□□ -1.54
SMARCA2-258ENST00000637103 ZZEF1O43149 2961 aa5.43□□□□□ -1.54
SMARCA2-258ENST00000637103 KRTAP10-6P60371 365 aaPredicted RBP5.43□□□□□ -1.54
SMARCA2-258ENST00000637103 PRUNE2Q8WUY3 3088 aa5.42□□□□□ -1.54
SMARCA2-258ENST00000637103 TGP01266 2768 aa5.41□□□□□ -1.54
SMARCA2-258ENST00000637103 LAMA1P25391 3075 aa5.41□□□□□ -1.54
SMARCA2-258ENST00000637103 LAMA3Q16787 3333 aa5.4□□□□□ -1.54
SMARCA2-258ENST00000637103 ADGRG4Q8IZF6 3080 aa5.36□□□□□ -1.55
SMARCA2-258ENST00000637103 CELSR3Q9NYQ7 3312 aa5.36□□□□□ -1.55
SMARCA2-258ENST00000637103 ATMQ13315 3056 aa5.35□□□□□ -1.55
SMARCA2-258ENST00000637103 FLNCQ14315 2725 aa5.33□□□□□ -1.56
SMARCA2-258ENST00000637103 TACC2O95359 2948 aa5.33□□□□□ -1.56
SMARCA2-258ENST00000637103 DMXL2Q8TDJ6 3036 aa5.32□□□□□ -1.56
SMARCA2-258ENST00000637103 XIRP2A4UGR9 3374 aa5.29□□□□□ -1.56
SMARCA2-258ENST00000637103 CELSR2Q9HCU4 2923 aa5.28□□□□□ -1.56
SMARCA2-258ENST00000637103 HRNRQ86YZ3 2850 aaPredicted RBP5.28□□□□□ -1.56
SMARCA2-258ENST00000637103 BRCA2P51587 3418 aa5.26□□□□□ -1.57
SMARCA2-258ENST00000637103 FRYLO94915 3013 aa5.26□□□□□ -1.57
SMARCA2-258ENST00000637103 COL12A1Q99715 3063 aa5.25□□□□□ -1.57
SMARCA2-258ENST00000637103 DNAH14Q0VDD8 3507 aa5.24□□□□□ -1.57
SMARCA2-258ENST00000637103 COL6A3P12111 3177 aa5.22□□□□□ -1.57
SMARCA2-258ENST00000637103 DCHS2Q6V1P9 2916 aa5.22□□□□□ -1.57
SMARCA2-258ENST00000637103 KRTAP3-2Q9BYR7 98 aa5.22□□□□□ -1.57
SMARCA2-258ENST00000637103 VCANP13611 3396 aa5.21□□□□□ -1.58
SMARCA2-258ENST00000637103 CDH23Q9H251 3354 aa5.2□□□□□ -1.58
SMARCA2-258ENST00000637103 BOD1L1Q8NFC6 3051 aa5.2□□□□□ -1.58
SMARCA2-258ENST00000637103 TNRC18O15417 2968 aaPredicted RBP5.19□□□□□ -1.58
SMARCA2-258ENST00000637103 ZANQ9Y493 2812 aa5.16□□□□□ -1.58
SMARCA2-258ENST00000637103 REV3LO60673 3130 aa5.16□□□□□ -1.58
SMARCA2-258ENST00000637103 KRTAP3-3Q9BYR6 98 aa5.16□□□□□ -1.58
SMARCA2-258ENST00000637103 TENM4Q6N022 2769 aa5.14□□□□□ -1.59
SMARCA2-258ENST00000637103 NF1P21359 2839 aa5.13□□□□□ -1.59
SMARCA2-258ENST00000637103 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
SMARCA2-258ENST00000637103 TENM2Q9NT68 2774 aa5.12□□□□□ -1.59
SMARCA2-258ENST00000637103 EYSQ5T1H1 3165 aa5.11□□□□□ -1.59
SMARCA2-258ENST00000637103 CFAP47Q6ZTR5 3102 aa5.1□□□□□ -1.59
SMARCA2-258ENST00000637103 FBN2P35556 2912 aa5.09□□□□□ -1.59
SMARCA2-258ENST00000637103 USP34Q70CQ2 3546 aa5.09□□□□□ -1.6
SMARCA2-258ENST00000637103 CRYBG3Q68DQ2 2970 aa5.08□□□□□ -1.6
SMARCA2-258ENST00000637103 SZT2Q5T011 3432 aa5.05□□□□□ -1.6
SMARCA2-258ENST00000637103 TENM3Q9P273 2699 aa5.05□□□□□ -1.6
SMARCA2-258ENST00000637103 TENM1Q9UKZ4 2725 aa5.04□□□□□ -1.6
SMARCA2-258ENST00000637103 CELSR1Q9NYQ6 3014 aa5.03□□□□□ -1.6
SMARCA2-258ENST00000637103 KRTAP10-12P60413 245 aa4.99□□□□□ -1.61
SMARCA2-258ENST00000637103 DMXL1Q9Y485 3027 aa4.97□□□□□ -1.61
SMARCA2-258ENST00000637103 MXRA5Q9NR99 2828 aa4.96□□□□□ -1.62
SMARCA2-258ENST00000637103 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
SMARCA2-258ENST00000637103 PDZD2O15018 2839 aa4.9□□□□□ -1.62
SMARCA2-258ENST00000637103 SPTBN5Q9NRC6 3674 aaKnown RBP4.88□□□□□ -1.63
SMARCA2-258ENST00000637103 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
SMARCA2-258ENST00000637103 MT1HL1P0DM35 61 aa4.86□□□□□ -1.63
SMARCA2-258ENST00000637103 SPEGQ15772 3267 aa4.86□□□□□ -1.63
SMARCA2-258ENST00000637103 PKD1L1Q8TDX9 2849 aa4.8□□□□□ -1.64
SMARCA2-258ENST00000637103 LOC400499M0QZD8 3231 aa4.79□□□□□ -1.64
SMARCA2-258ENST00000637103 KRTAP10-4P60372 401 aaPredicted RBP4.78□□□□□ -1.64
SMARCA2-258ENST00000637103 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
SMARCA2-258ENST00000637103 LORP23490 312 aaPredicted RBP4.73□□□□□ -1.65
SMARCA2-258ENST00000637103 MEGF8Q7Z7M0 2845 aa4.73□□□□□ -1.65
SMARCA2-258ENST00000637103 ANK3Q12955 4377 aaKnown RBP4.73□□□□□ -1.65
SMARCA2-258ENST00000637103 WDFY3Q8IZQ1 3526 aa4.72□□□□□ -1.65
SMARCA2-258ENST00000637103 FBN3Q75N90 2809 aa4.71□□□□□ -1.66
SMARCA2-258ENST00000637103 DCHS1Q96JQ0 3298 aa4.68□□□□□ -1.66
SMARCA2-258ENST00000637103 VWFP04275 2813 aa4.67□□□□□ -1.66
SMARCA2-258ENST00000637103 ZFHX4Q86UP3 3567 aa4.65□□□□□ -1.66
SMARCA2-258ENST00000637103 ZFHX3Q15911 3703 aa4.64□□□□□ -1.67
SMARCA2-258ENST00000637103 CSMD1Q96PZ7 3565 aa4.64□□□□□ -1.67
SMARCA2-258ENST00000637103 SRRM2Q9UQ35 2752 aaKnown RBP4.63□□□□□ -1.67
SMARCA2-258ENST00000637103 MYO15AQ9UKN7 3530 aa4.6□□□□□ -1.67
SMARCA2-258ENST00000637103 KRTAP10-5P60370 271 aa4.59□□□□□ -1.67
SMARCA2-258ENST00000637103 HUWE1Q7Z6Z7 4374 aaKnown RBP4.59□□□□□ -1.68
SMARCA2-258ENST00000637103 RELNP78509 3460 aa4.57□□□□□ -1.68
SMARCA2-258ENST00000637103 ALMS1Q8TCU4 4167 aa4.55□□□□□ -1.68
SMARCA2-258ENST00000637103 ASPMQ8IZT6 3477 aa4.52□□□□□ -1.69
SMARCA2-258ENST00000637103 DNAH2Q9P225 4427 aa4.5□□□□□ -1.69
SMARCA2-258ENST00000637103 OTOGQ6ZRI0 2925 aa4.47□□□□□ -1.69
SMARCA2-258ENST00000637103 SMG1Q96Q15 3661 aaKnown RBP4.47□□□□□ -1.69
SMARCA2-258ENST00000637103 FBN1P35555 2871 aaKnown RBP4.46□□□□□ -1.7
SMARCA2-258ENST00000637103 NBPF19A0A087WUL8 3843 aa4.44□□□□□ -1.7
SMARCA2-258ENST00000637103 COL7A1Q02388 2944 aa4.43□□□□□ -1.7
SMARCA2-258ENST00000637103 KRTAP4-5Q9BYR2 181 aa4.43□□□□□ -1.7
SMARCA2-258ENST00000637103 DNAH11Q96DT5 4516 aa4.42□□□□□ -1.7
SMARCA2-258ENST00000637103 KRTAP8-1Q8IUC2 63 aa4.4□□□□□ -1.7
SMARCA2-258ENST00000637103 SPRR2GQ9BYE4 73 aa4.39□□□□□ -1.71
SMARCA2-258ENST00000637103 DNAH10Q8IVF4 4471 aa4.38□□□□□ -1.71
SMARCA2-258ENST00000637103 LAMA5O15230 3695 aa4.36□□□□□ -1.71
SMARCA2-258ENST00000637103 DMDP11532 3685 aa4.35□□□□□ -1.71
SMARCA2-258ENST00000637103 TRRAPQ9Y4A5 3859 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms