RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 RANBP2P49792 3224 aaKnown RBP2.87□□□□□ -1.95
SCN2A-212ENST00000636662 ZNF292O60281 2723 aa2.86□□□□□ -1.95
SCN2A-212ENST00000636662 KRTAP10-10P60014 251 aa2.86□□□□□ -1.95
SCN2A-212ENST00000636662 KRTAP13-4Q3LI77 160 aa2.86□□□□□ -1.95
SCN2A-212ENST00000636662 TGP01266 2768 aa2.85□□□□□ -1.95
SCN2A-212ENST00000636662 TACC2O95359 2948 aa2.84□□□□□ -1.95
SCN2A-212ENST00000636662 KRTAP23-1A1A580 65 aa2.84□□□□□ -1.96
SCN2A-212ENST00000636662 KRTAP21-3Q3LHN1 58 aa2.84□□□□□ -1.96
SCN2A-212ENST00000636662 TRIOO75962 3097 aa2.84□□□□□ -1.96
SCN2A-212ENST00000636662 XP32Q5T750 250 aa2.83□□□□□ -1.96
SCN2A-212ENST00000636662 FLNBO75369 2602 aaKnown RBP2.81□□□□□ -1.96
SCN2A-212ENST00000636662 VPS13AQ96RL7 3174 aa2.81□□□□□ -1.96
SCN2A-212ENST00000636662 KRTAP12-1P59990 96 aa2.8□□□□□ -1.96
SCN2A-212ENST00000636662 NIPBLQ6KC79 2804 aaeCLIP2.8□□□□□ -1.96
SCN2A-212ENST00000636662 FRYLO94915 3013 aa2.8□□□□□ -1.96
SCN2A-212ENST00000636662 UNC80Q8N2C7 3258 aa2.78□□□□□ -1.96
SCN2A-212ENST00000636662 KRTAP1-4P0C5Y4 121 aa2.78□□□□□ -1.96
SCN2A-212ENST00000636662 CELSR3Q9NYQ7 3312 aa2.77□□□□□ -1.97
SCN2A-212ENST00000636662 ALMS1Q8TCU4 4167 aa2.76□□□□□ -1.97
SCN2A-212ENST00000636662 CRCT1Q9UGL9 99 aa2.76□□□□□ -1.97
SCN2A-212ENST00000636662 HTTP42858 3142 aa2.76□□□□□ -1.97
SCN2A-212ENST00000636662 PRUNE2Q8WUY3 3088 aa2.74□□□□□ -1.97
SCN2A-212ENST00000636662 SRRM2Q9UQ35 2752 aaKnown RBP2.74□□□□□ -1.97
SCN2A-212ENST00000636662 HRNRQ86YZ3 2850 aaPredicted RBP2.74□□□□□ -1.97
SCN2A-212ENST00000636662 HIVEP1P15822 2718 aa2.73□□□□□ -1.97
SCN2A-212ENST00000636662 COL12A1Q99715 3063 aa2.72□□□□□ -1.97
SCN2A-212ENST00000636662 KRTAP10-6P60371 365 aaPredicted RBP2.72□□□□□ -1.97
SCN2A-212ENST00000636662 TENM2Q9NT68 2774 aa2.7□□□□□ -1.98
SCN2A-212ENST00000636662 ASH1LQ9NR48 2969 aaKnown RBP2.7□□□□□ -1.98
SCN2A-212ENST00000636662 XIRP2A4UGR9 3374 aa2.7□□□□□ -1.98
SCN2A-212ENST00000636662 MKI67P46013 3256 aaKnown RBP2.69□□□□□ -1.98
SCN2A-212ENST00000636662 ADGRG4Q8IZF6 3080 aa2.68□□□□□ -1.98
SCN2A-212ENST00000636662 WDFY4Q6ZS81 3184 aa2.68□□□□□ -1.98
SCN2A-212ENST00000636662 DMXL1Q9Y485 3027 aa2.68□□□□□ -1.98
SCN2A-212ENST00000636662 KRTAP3-1Q9BYR8 98 aa2.67□□□□□ -1.98
SCN2A-212ENST00000636662 NF1P21359 2839 aa2.67□□□□□ -1.98
SCN2A-212ENST00000636662 LAMA1P25391 3075 aa2.67□□□□□ -1.98
SCN2A-212ENST00000636662 SPTBN5Q9NRC6 3674 aaKnown RBP2.66□□□□□ -1.98
SCN2A-212ENST00000636662 FLNCQ14315 2725 aa2.65□□□□□ -1.98
SCN2A-212ENST00000636662 PDZD2O15018 2839 aa2.65□□□□□ -1.99
SCN2A-212ENST00000636662 ATMQ13315 3056 aa2.64□□□□□ -1.99
SCN2A-212ENST00000636662 TENM3Q9P273 2699 aa2.63□□□□□ -1.99
SCN2A-212ENST00000636662 MXRA5Q9NR99 2828 aa2.63□□□□□ -1.99
SCN2A-212ENST00000636662 DNAH14Q0VDD8 3507 aa2.62□□□□□ -1.99
SCN2A-212ENST00000636662 SZT2Q5T011 3432 aa2.62□□□□□ -1.99
SCN2A-212ENST00000636662 ZANQ9Y493 2812 aa2.62□□□□□ -1.99
SCN2A-212ENST00000636662 ZFHX4Q86UP3 3567 aa2.61□□□□□ -1.99
SCN2A-212ENST00000636662 CELSR2Q9HCU4 2923 aa2.61□□□□□ -1.99
SCN2A-212ENST00000636662 KRTAP3-2Q9BYR7 98 aa2.6□□□□□ -1.99
SCN2A-212ENST00000636662 KRTAP10-5P60370 271 aa2.6□□□□□ -1.99
SCN2A-212ENST00000636662 CRYBG3Q68DQ2 2970 aa2.6□□□□□ -1.99
SCN2A-212ENST00000636662 CFAP47Q6ZTR5 3102 aa2.58□□□□□ -2
SCN2A-212ENST00000636662 FBN2P35556 2912 aa2.58□□□□□ -2
SCN2A-212ENST00000636662 DMXL2Q8TDJ6 3036 aa2.58□□□□□ -2
SCN2A-212ENST00000636662 CELSR1Q9NYQ6 3014 aa2.56□□□□□ -2
SCN2A-212ENST00000636662 BOD1L1Q8NFC6 3051 aa2.56□□□□□ -2
SCN2A-212ENST00000636662 SPEGQ15772 3267 aa2.56□□□□□ -2
SCN2A-212ENST00000636662 DCHS2Q6V1P9 2916 aa2.55□□□□□ -2
SCN2A-212ENST00000636662 KRTAP10-7P60409 375 aaPredicted RBP2.55□□□□□ -2
SCN2A-212ENST00000636662 DCHS1Q96JQ0 3298 aa2.55□□□□□ -2
SCN2A-212ENST00000636662 COL6A3P12111 3177 aa2.55□□□□□ -2
SCN2A-212ENST00000636662 KRTAP3-3Q9BYR6 98 aa2.54□□□□□ -2
SCN2A-212ENST00000636662 TENM1Q9UKZ4 2725 aa2.54□□□□□ -2
SCN2A-212ENST00000636662 VCANP13611 3396 aa2.54□□□□□ -2
SCN2A-212ENST00000636662 USP34Q70CQ2 3546 aa2.53□□□□□ -2
SCN2A-212ENST00000636662 VWFP04275 2813 aa2.52□□□□□ -2.01
SCN2A-212ENST00000636662 CDH23Q9H251 3354 aa2.52□□□□□ -2.01
SCN2A-212ENST00000636662 TENM4Q6N022 2769 aa2.51□□□□□ -2.01
SCN2A-212ENST00000636662 KRTAP10-12P60413 245 aa2.5□□□□□ -2.01
SCN2A-212ENST00000636662 LOC400499M0QZD8 3231 aa2.5□□□□□ -2.01
SCN2A-212ENST00000636662 OTOGQ6ZRI0 2925 aa2.5□□□□□ -2.01
SCN2A-212ENST00000636662 LAMA3Q16787 3333 aa2.49□□□□□ -2.01
SCN2A-212ENST00000636662 BRCA2P51587 3418 aa2.48□□□□□ -2.01
SCN2A-212ENST00000636662 PKD1L1Q8TDX9 2849 aa2.47□□□□□ -2.01
SCN2A-212ENST00000636662 KRTAP19-4Q3LI73 84 aa2.45□□□□□ -2.02
SCN2A-212ENST00000636662 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
SCN2A-212ENST00000636662 MEGF8Q7Z7M0 2845 aa2.45□□□□□ -2.02
SCN2A-212ENST00000636662 AKAP9Q99996 3911 aa2.43□□□□□ -2.02
SCN2A-212ENST00000636662 ASPMQ8IZT6 3477 aa2.42□□□□□ -2.02
SCN2A-212ENST00000636662 COL7A1Q02388 2944 aa2.42□□□□□ -2.02
SCN2A-212ENST00000636662 NBPF19A0A087WUL8 3843 aa2.42□□□□□ -2.02
SCN2A-212ENST00000636662 MYO15AQ9UKN7 3530 aa2.41□□□□□ -2.02
SCN2A-212ENST00000636662 LCE3AQ5TA76 89 aa2.41□□□□□ -2.02
SCN2A-212ENST00000636662 EYSQ5T1H1 3165 aa2.39□□□□□ -2.03
SCN2A-212ENST00000636662 WDFY3Q8IZQ1 3526 aa2.38□□□□□ -2.03
SCN2A-212ENST00000636662 SPRR5A0A1B0GTR4 108 aa2.37□□□□□ -2.03
SCN2A-212ENST00000636662 KRTAP10-4P60372 401 aaPredicted RBP2.37□□□□□ -2.03
SCN2A-212ENST00000636662 FBN3Q75N90 2809 aa2.36□□□□□ -2.03
SCN2A-212ENST00000636662 CMYA5Q8N3K9 4069 aa2.34□□□□□ -2.03
SCN2A-212ENST00000636662 CSMD1Q96PZ7 3565 aa2.34□□□□□ -2.04
SCN2A-212ENST00000636662 DMDP11532 3685 aa2.33□□□□□ -2.04
SCN2A-212ENST00000636662 FBN1P35555 2871 aaKnown RBP2.31□□□□□ -2.04
SCN2A-212ENST00000636662 SPENQ96T58 3664 aaKnown RBP2.31□□□□□ -2.04
SCN2A-212ENST00000636662 RELNP78509 3460 aa2.3□□□□□ -2.04
SCN2A-212ENST00000636662 DNAH3Q8TD57 4116 aa2.28□□□□□ -2.04
SCN2A-212ENST00000636662 SMG1Q96Q15 3661 aaKnown RBP2.28□□□□□ -2.04
SCN2A-212ENST00000636662 LAMA5O15230 3695 aa2.26□□□□□ -2.05
SCN2A-212ENST00000636662 TRRAPQ9Y4A5 3859 aa2.26□□□□□ -2.05
SCN2A-212ENST00000636662 VPS13CQ709C8 3753 aa2.24□□□□□ -2.05
SCN2A-212ENST00000636662 DNAH6Q9C0G6 4158 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms