RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 FLNAP21333 2647 aaKnown RBP3.72□□□□□ -1.81
GABRB3-218ENST00000635994 KRTAP10-2P60368 255 aa3.72□□□□□ -1.81
GABRB3-218ENST00000635994 KRTAP26-1Q6PEX3 210 aa3.71□□□□□ -1.82
GABRB3-218ENST00000635994 CRYBG3Q68DQ2 2970 aa3.7□□□□□ -1.82
GABRB3-218ENST00000635994 TEX15Q9BXT5 2789 aa3.7□□□□□ -1.82
GABRB3-218ENST00000635994 KRTAP1-5Q9BYS1 174 aa3.69□□□□□ -1.82
GABRB3-218ENST00000635994 CHD6Q8TD26 2715 aa3.69□□□□□ -1.82
GABRB3-218ENST00000635994 CMYA5Q8N3K9 4069 aa3.68□□□□□ -1.82
GABRB3-218ENST00000635994 C20orf166-AS1Q96NR2 134 aa3.68□□□□□ -1.82
GABRB3-218ENST00000635994 A8MUU9 505 aa3.68□□□□□ -1.82
GABRB3-218ENST00000635994 TNP1P09430 55 aa3.67□□□□□ -1.82
GABRB3-218ENST00000635994 Q5VV11 94 aa3.67□□□□□ -1.82
GABRB3-218ENST00000635994 Q5XG85 94 aa3.66□□□□□ -1.82
GABRB3-218ENST00000635994 H3BS24 57 aa3.64□□□□□ -1.83
GABRB3-218ENST00000635994 Q8NDZ9 215 aa3.64□□□□□ -1.83
GABRB3-218ENST00000635994 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
GABRB3-218ENST00000635994 ASH1LQ9NR48 2969 aaKnown RBP3.63□□□□□ -1.83
GABRB3-218ENST00000635994 CELSR1Q9NYQ6 3014 aa3.63□□□□□ -1.83
GABRB3-218ENST00000635994 DSPP15924 2871 aaKnown RBP3.62□□□□□ -1.83
GABRB3-218ENST00000635994 DCHS2Q6V1P9 2916 aa3.62□□□□□ -1.83
GABRB3-218ENST00000635994 TENM4Q6N022 2769 aa3.61□□□□□ -1.83
GABRB3-218ENST00000635994 GCN1Q92616 2671 aaKnown RBP3.61□□□□□ -1.83
GABRB3-218ENST00000635994 CELSR2Q9HCU4 2923 aa3.61□□□□□ -1.83
GABRB3-218ENST00000635994 A0A087X002 238 aa3.6□□□□□ -1.83
GABRB3-218ENST00000635994 SPATA8Q6RVD6 105 aa3.6□□□□□ -1.83
GABRB3-218ENST00000635994 KRTAP4-16G5E9R7 235 aaPredicted RBP3.6□□□□□ -1.83
GABRB3-218ENST00000635994 PP632Q6XCG6 107 aa3.6□□□□□ -1.83
GABRB3-218ENST00000635994 KRTAP29-1A8MX34 341 aaPredicted RBP3.59□□□□□ -1.83
GABRB3-218ENST00000635994 UBR5O95071 2799 aaPredicted RBP3.59□□□□□ -1.84
GABRB3-218ENST00000635994 KRTAP16-1A8MUX0 517 aa3.58□□□□□ -1.84
GABRB3-218ENST00000635994 ANK2Q01484 3957 aa3.58□□□□□ -1.84
GABRB3-218ENST00000635994 NSD1Q96L73 2696 aaPredicted RBP3.58□□□□□ -1.84
GABRB3-218ENST00000635994 NOTCH2NLQ7Z3S9 236 aa3.57□□□□□ -1.84
GABRB3-218ENST00000635994 PRO2289Q9P1D8 64 aa3.57□□□□□ -1.84
GABRB3-218ENST00000635994 COL12A1Q99715 3063 aa3.56□□□□□ -1.84
GABRB3-218ENST00000635994 Q6ZRN7 208 aaPredicted RBP3.56□□□□□ -1.84
GABRB3-218ENST00000635994 MAP1AP78559 2803 aaPredicted RBP3.55□□□□□ -1.84
GABRB3-218ENST00000635994 UTP20O75691 2785 aaKnown RBP3.54□□□□□ -1.84
GABRB3-218ENST00000635994 DNAH3Q8TD57 4116 aa3.53□□□□□ -1.84
GABRB3-218ENST00000635994 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
GABRB3-218ENST00000635994 ANK3Q12955 4377 aaKnown RBP3.52□□□□□ -1.85
GABRB3-218ENST00000635994 FLNCQ14315 2725 aa3.52□□□□□ -1.85
GABRB3-218ENST00000635994 ADGRG4Q8IZF6 3080 aa3.51□□□□□ -1.85
GABRB3-218ENST00000635994 DNHD1Q96M86 4753 aa3.5□□□□□ -1.85
GABRB3-218ENST00000635994 KRTAP10-8P60410 259 aa3.49□□□□□ -1.85
GABRB3-218ENST00000635994 KRTAP13-2Q52LG2 175 aa3.49□□□□□ -1.85
GABRB3-218ENST00000635994 CSMD3Q7Z407 3707 aa3.48□□□□□ -1.85
GABRB3-218ENST00000635994 C10orf95Q9H7T3 257 aa3.47□□□□□ -1.85
GABRB3-218ENST00000635994 KRTAP13-1Q8IUC0 172 aa3.47□□□□□ -1.85
GABRB3-218ENST00000635994 LYSTQ99698 3801 aa3.47□□□□□ -1.85
GABRB3-218ENST00000635994 FBN2P35556 2912 aa3.47□□□□□ -1.85
GABRB3-218ENST00000635994 TPRXLQ17RH7 258 aa3.46□□□□□ -1.85
GABRB3-218ENST00000635994 HIVEP1P15822 2718 aa3.46□□□□□ -1.86
GABRB3-218ENST00000635994 ITPR2Q14571 2701 aa3.44□□□□□ -1.86
GABRB3-218ENST00000635994 A8MU10 97 aa3.44□□□□□ -1.86
GABRB3-218ENST00000635994 P0C880 135 aa3.43□□□□□ -1.86
GABRB3-218ENST00000635994 KRTAP10-10P60014 251 aa3.43□□□□□ -1.86
GABRB3-218ENST00000635994 APCP25054 2843 aa3.43□□□□□ -1.86
GABRB3-218ENST00000635994 TENM3Q9P273 2699 aa3.43□□□□□ -1.86
GABRB3-218ENST00000635994 KRTAP3-3Q9BYR6 98 aa3.42□□□□□ -1.86
GABRB3-218ENST00000635994 KRTAP3-2Q9BYR7 98 aa3.42□□□□□ -1.86
GABRB3-218ENST00000635994 CYSTM1Q9H1C7 97 aa3.42□□□□□ -1.86
GABRB3-218ENST00000635994 LCE2DQ5TA82 110 aaPredicted RBP3.41□□□□□ -1.86
GABRB3-218ENST00000635994 NBEAL2Q6ZNJ1 2754 aa3.41□□□□□ -1.86
GABRB3-218ENST00000635994 XP32Q5T750 250 aa3.4□□□□□ -1.86
GABRB3-218ENST00000635994 PDZD2O15018 2839 aa3.4□□□□□ -1.87
GABRB3-218ENST00000635994 TRRAPQ9Y4A5 3859 aa3.39□□□□□ -1.87
GABRB3-218ENST00000635994 KRTAP11-1Q8IUC1 163 aa3.39□□□□□ -1.87
GABRB3-218ENST00000635994 A6NN06 94 aa3.39□□□□□ -1.87
GABRB3-218ENST00000635994 HRNRQ86YZ3 2850 aaPredicted RBP3.38□□□□□ -1.87
GABRB3-218ENST00000635994 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
GABRB3-218ENST00000635994 LRBAP50851 2863 aa3.36□□□□□ -1.87
GABRB3-218ENST00000635994 A0A1B0GVY2 172 aa3.35□□□□□ -1.87
GABRB3-218ENST00000635994 OTOGQ6ZRI0 2925 aa3.35□□□□□ -1.87
GABRB3-218ENST00000635994 KRTAP7-1Q8IUC3 87 aa3.34□□□□□ -1.87
GABRB3-218ENST00000635994 DNAH7Q8WXX0 4024 aa3.33□□□□□ -1.88
GABRB3-218ENST00000635994 TACC2O95359 2948 aa3.31□□□□□ -1.88
GABRB3-218ENST00000635994 KRTAP1-4P0C5Y4 121 aa3.3□□□□□ -1.88
GABRB3-218ENST00000635994 PRKDCP78527 4128 aaKnown RBP3.3□□□□□ -1.88
GABRB3-218ENST00000635994 KRTAP13-3Q3SY46 172 aa3.28□□□□□ -1.88
GABRB3-218ENST00000635994 FRAS1Q86XX4 4008 aa3.24□□□□□ -1.89
GABRB3-218ENST00000635994 NF1P21359 2839 aa3.24□□□□□ -1.89
GABRB3-218ENST00000635994 ALMS1Q8TCU4 4167 aa3.22□□□□□ -1.89
GABRB3-218ENST00000635994 DYNC2H1Q8NCM8 4307 aaKnown RBP3.22□□□□□ -1.89
GABRB3-218ENST00000635994 TENM1Q9UKZ4 2725 aa3.2□□□□□ -1.9
GABRB3-218ENST00000635994 DNAH1Q9P2D7 4330 aa3.2□□□□□ -1.9
GABRB3-218ENST00000635994 NIPBLQ6KC79 2804 aaeCLIP3.2□□□□□ -1.9
GABRB3-218ENST00000635994 TENM2Q9NT68 2774 aa3.19□□□□□ -1.9
GABRB3-218ENST00000635994 RYR3Q15413 4870 aa3.18□□□□□ -1.9
GABRB3-218ENST00000635994 COL7A1Q02388 2944 aa3.17□□□□□ -1.9
GABRB3-218ENST00000635994 H0YAA0 97 aa3.17□□□□□ -1.9
GABRB3-218ENST00000635994 KMT2CQ8NEZ4 4911 aaKnown RBP3.17□□□□□ -1.9
GABRB3-218ENST00000635994 MXRA5Q9NR99 2828 aa3.15□□□□□ -1.91
GABRB3-218ENST00000635994 KRTAP13-4Q3LI77 160 aa3.14□□□□□ -1.91
GABRB3-218ENST00000635994 SRRM2Q9UQ35 2752 aaKnown RBP3.14□□□□□ -1.91
GABRB3-218ENST00000635994 HECTD4Q9Y4D8 3996 aa3.12□□□□□ -1.91
GABRB3-218ENST00000635994 FBN1P35555 2871 aaKnown RBP3.11□□□□□ -1.91
GABRB3-218ENST00000635994 PKD1L1Q8TDX9 2849 aa3.1□□□□□ -1.91
GABRB3-218ENST00000635994 FBN3Q75N90 2809 aa3.1□□□□□ -1.91
GABRB3-218ENST00000635994 HYDINQ4G0P3 5121 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms