RNA–Protein interactions for RNA: ENST00000635832.1

GABRB3-217, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-217ENST00000635832 CRYBG3Q68DQ2 2970 aa4.53□□□□□ -1.68
GABRB3-217ENST00000635832 TENM1Q9UKZ4 2725 aa4.52□□□□□ -1.69
GABRB3-217ENST00000635832 REV3LO60673 3130 aa4.52□□□□□ -1.69
GABRB3-217ENST00000635832 TENM2Q9NT68 2774 aa4.51□□□□□ -1.69
GABRB3-217ENST00000635832 GOLGB1Q14789 3259 aaKnown RBP4.51□□□□□ -1.69
GABRB3-217ENST00000635832 TACC2O95359 2948 aa4.49□□□□□ -1.69
GABRB3-217ENST00000635832 TRANK1O15050 2925 aa4.49□□□□□ -1.69
GABRB3-217ENST00000635832 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
GABRB3-217ENST00000635832 LRBAP50851 2863 aa4.46□□□□□ -1.7
GABRB3-217ENST00000635832 INE1O15225 51 aa4.45□□□□□ -1.7
GABRB3-217ENST00000635832 KRTAP10-12P60413 245 aa4.44□□□□□ -1.7
GABRB3-217ENST00000635832 WDFY4Q6ZS81 3184 aa4.44□□□□□ -1.7
GABRB3-217ENST00000635832 CRCT1Q9UGL9 99 aa4.43□□□□□ -1.7
GABRB3-217ENST00000635832 PCNTO95613 3336 aa4.42□□□□□ -1.7
GABRB3-217ENST00000635832 TGP01266 2768 aa4.42□□□□□ -1.7
GABRB3-217ENST00000635832 PRUNE2Q8WUY3 3088 aa4.42□□□□□ -1.7
GABRB3-217ENST00000635832 UTRNP46939 3433 aa4.41□□□□□ -1.7
GABRB3-217ENST00000635832 KALRNO60229 2985 aa4.39□□□□□ -1.71
GABRB3-217ENST00000635832 KRTAP10-6P60371 365 aaPredicted RBP4.38□□□□□ -1.71
GABRB3-217ENST00000635832 ASH1LQ9NR48 2969 aaKnown RBP4.37□□□□□ -1.71
GABRB3-217ENST00000635832 CELSR2Q9HCU4 2923 aa4.37□□□□□ -1.71
GABRB3-217ENST00000635832 DMXL2Q8TDJ6 3036 aa4.35□□□□□ -1.71
GABRB3-217ENST00000635832 DCHS2Q6V1P9 2916 aa4.35□□□□□ -1.71
GABRB3-217ENST00000635832 NF1P21359 2839 aa4.33□□□□□ -1.72
GABRB3-217ENST00000635832 LAMA2P24043 3122 aaKnown RBP4.33□□□□□ -1.72
GABRB3-217ENST00000635832 COL12A1Q99715 3063 aa4.33□□□□□ -1.72
GABRB3-217ENST00000635832 MT1HL1P0DM35 61 aa4.33□□□□□ -1.72
GABRB3-217ENST00000635832 ATMQ13315 3056 aa4.32□□□□□ -1.72
GABRB3-217ENST00000635832 RANBP2P49792 3224 aaKnown RBP4.32□□□□□ -1.72
GABRB3-217ENST00000635832 HTTP42858 3142 aa4.29□□□□□ -1.72
GABRB3-217ENST00000635832 PDZD2O15018 2839 aa4.29□□□□□ -1.72
GABRB3-217ENST00000635832 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
GABRB3-217ENST00000635832 TRIOO75962 3097 aa4.28□□□□□ -1.72
GABRB3-217ENST00000635832 UNC80Q8N2C7 3258 aa4.25□□□□□ -1.73
GABRB3-217ENST00000635832 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
GABRB3-217ENST00000635832 FRYLO94915 3013 aa4.19□□□□□ -1.74
GABRB3-217ENST00000635832 EYSQ5T1H1 3165 aa4.19□□□□□ -1.74
GABRB3-217ENST00000635832 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
GABRB3-217ENST00000635832 ZZEF1O43149 2961 aa4.18□□□□□ -1.74
GABRB3-217ENST00000635832 KRTAP3-2Q9BYR7 98 aa4.18□□□□□ -1.74
GABRB3-217ENST00000635832 FBN3Q75N90 2809 aa4.17□□□□□ -1.74
GABRB3-217ENST00000635832 PKD1L1Q8TDX9 2849 aa4.17□□□□□ -1.74
GABRB3-217ENST00000635832 LAMA3Q16787 3333 aa4.16□□□□□ -1.74
GABRB3-217ENST00000635832 VPS13AQ96RL7 3174 aa4.16□□□□□ -1.74
GABRB3-217ENST00000635832 MKI67P46013 3256 aaKnown RBP4.15□□□□□ -1.74
GABRB3-217ENST00000635832 KRTAP3-3Q9BYR6 98 aa4.15□□□□□ -1.74
GABRB3-217ENST00000635832 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
GABRB3-217ENST00000635832 FREM2Q5SZK8 3169 aa4.14□□□□□ -1.75
GABRB3-217ENST00000635832 NBEAQ8NFP9 2946 aa4.13□□□□□ -1.75
GABRB3-217ENST00000635832 KRTAP4-5Q9BYR2 181 aa4.11□□□□□ -1.75
GABRB3-217ENST00000635832 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
GABRB3-217ENST00000635832 CELSR1Q9NYQ6 3014 aa4.11□□□□□ -1.75
GABRB3-217ENST00000635832 TNRC18O15417 2968 aaPredicted RBP4.1□□□□□ -1.75
GABRB3-217ENST00000635832 VWFP04275 2813 aa4.1□□□□□ -1.75
GABRB3-217ENST00000635832 ZANQ9Y493 2812 aa4.1□□□□□ -1.75
GABRB3-217ENST00000635832 MXRA5Q9NR99 2828 aa4.1□□□□□ -1.75
GABRB3-217ENST00000635832 ADGRG4Q8IZF6 3080 aa4.1□□□□□ -1.75
GABRB3-217ENST00000635832 KRTAP10-4P60372 401 aaPredicted RBP4.07□□□□□ -1.76
GABRB3-217ENST00000635832 BOD1L1Q8NFC6 3051 aa4.06□□□□□ -1.76
GABRB3-217ENST00000635832 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
GABRB3-217ENST00000635832 XIRP2A4UGR9 3374 aa4.03□□□□□ -1.76
GABRB3-217ENST00000635832 HRNRQ86YZ3 2850 aaPredicted RBP4□□□□□ -1.77
GABRB3-217ENST00000635832 FBN2P35556 2912 aa3.99□□□□□ -1.77
GABRB3-217ENST00000635832 CFAP47Q6ZTR5 3102 aa3.98□□□□□ -1.77
GABRB3-217ENST00000635832 CELSR3Q9NYQ7 3312 aa3.96□□□□□ -1.78
GABRB3-217ENST00000635832 DMXL1Q9Y485 3027 aa3.95□□□□□ -1.78
GABRB3-217ENST00000635832 USP34Q70CQ2 3546 aa3.94□□□□□ -1.78
GABRB3-217ENST00000635832 SRRM2Q9UQ35 2752 aaKnown RBP3.93□□□□□ -1.78
GABRB3-217ENST00000635832 VCANP13611 3396 aa3.92□□□□□ -1.78
GABRB3-217ENST00000635832 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
GABRB3-217ENST00000635832 BRCA2P51587 3418 aa3.91□□□□□ -1.78
GABRB3-217ENST00000635832 COL6A3P12111 3177 aa3.91□□□□□ -1.78
GABRB3-217ENST00000635832 MEGF8Q7Z7M0 2845 aa3.87□□□□□ -1.79
GABRB3-217ENST00000635832 SPRR2FQ96RM1 72 aa3.85□□□□□ -1.79
GABRB3-217ENST00000635832 MT1HP80294 61 aa3.85□□□□□ -1.79
GABRB3-217ENST00000635832 HUWE1Q7Z6Z7 4374 aaKnown RBP3.84□□□□□ -1.79
GABRB3-217ENST00000635832 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
GABRB3-217ENST00000635832 ALMS1Q8TCU4 4167 aa3.8□□□□□ -1.8
GABRB3-217ENST00000635832 MT2AP02795 61 aa3.79□□□□□ -1.8
GABRB3-217ENST00000635832 CDH23Q9H251 3354 aa3.78□□□□□ -1.8
GABRB3-217ENST00000635832 SPRR2GQ9BYE4 73 aa3.77□□□□□ -1.81
GABRB3-217ENST00000635832 COL7A1Q02388 2944 aa3.76□□□□□ -1.81
GABRB3-217ENST00000635832 SPEGQ15772 3267 aa3.75□□□□□ -1.81
GABRB3-217ENST00000635832 OTOGQ6ZRI0 2925 aa3.72□□□□□ -1.81
GABRB3-217ENST00000635832 SZT2Q5T011 3432 aa3.71□□□□□ -1.82
GABRB3-217ENST00000635832 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
GABRB3-217ENST00000635832 KRTAP4-1Q9BYQ7 146 aa3.7□□□□□ -1.82
GABRB3-217ENST00000635832 FBN1P35555 2871 aaKnown RBP3.7□□□□□ -1.82
GABRB3-217ENST00000635832 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
GABRB3-217ENST00000635832 ANK3Q12955 4377 aaKnown RBP3.67□□□□□ -1.82
GABRB3-217ENST00000635832 SPRR2EP22531 72 aa3.66□□□□□ -1.82
GABRB3-217ENST00000635832 SPRR2BP35325 72 aa3.66□□□□□ -1.82
GABRB3-217ENST00000635832 SPRR2AP35326 72 aa3.66□□□□□ -1.82
GABRB3-217ENST00000635832 MT1FP04733 61 aa3.66□□□□□ -1.82
GABRB3-217ENST00000635832 ZFHX4Q86UP3 3567 aa3.65□□□□□ -1.83
GABRB3-217ENST00000635832 DNAH14Q0VDD8 3507 aa3.62□□□□□ -1.83
GABRB3-217ENST00000635832 NBPF19A0A087WUL8 3843 aa3.59□□□□□ -1.83
GABRB3-217ENST00000635832 SPRR2DP22532 72 aa3.57□□□□□ -1.84
GABRB3-217ENST00000635832 DCHS1Q96JQ0 3298 aa3.56□□□□□ -1.84
GABRB3-217ENST00000635832 DNAH2Q9P225 4427 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms