RNA–Protein interactions for RNA: ENST00000635832.1

GABRB3-217, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-217ENST00000635832 DCAF8L2P0C7V8 631 aa16.69■□□□□ 0.26
GABRB3-217ENST00000635832 PELP1Q8IZL8 1130 aaKnown RBP15.58■□□□□ 0.08
GABRB3-217ENST00000635832 SUPT5HO00267 1087 aaKnown RBP15.52■□□□□ 0.08
GABRB3-217ENST00000635832 FAM9AQ8IZU1 332 aaPredicted RBP15.49■□□□□ 0.07
GABRB3-217ENST00000635832 APLP2Q06481 763 aa15.37■□□□□ 0.05
GABRB3-217ENST00000635832 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
GABRB3-217ENST00000635832 SHROOM4Q9ULL8 1493 aa15.05■□□□□ 0
GABRB3-217ENST00000635832 CCER1Q8TC90 406 aaPredicted RBP14.89□□□□□ -0.03
GABRB3-217ENST00000635832 NISCHQ9Y2I1 1504 aa14.85□□□□□ -0.03
GABRB3-217ENST00000635832 ERICH6Q7L0X2 663 aa14.85□□□□□ -0.03
GABRB3-217ENST00000635832 ATP1B4Q9UN42 357 aaPredicted RBP14.72□□□□□ -0.05
GABRB3-217ENST00000635832 TTBK1Q5TCY1 1321 aaPredicted RBP14.67□□□□□ -0.06
GABRB3-217ENST00000635832 RANGAP1P46060 587 aaPredicted RBP14.63□□□□□ -0.07
GABRB3-217ENST00000635832 CENPBP07199 599 aaPredicted RBP14.62□□□□□ -0.07
GABRB3-217ENST00000635832 PCGF6Q9BYE7 350 aa14.56□□□□□ -0.08
GABRB3-217ENST00000635832 NEFLP07196 543 aa14.53□□□□□ -0.08
GABRB3-217ENST00000635832 ZEB1P37275 1124 aaPredicted RBP14.53□□□□□ -0.08
GABRB3-217ENST00000635832 TRIM41Q8WV44 630 aa14.46□□□□□ -0.09
GABRB3-217ENST00000635832 UBTFP17480 764 aaKnown RBP14.45□□□□□ -0.1
GABRB3-217ENST00000635832 MYT1LQ9UL68 1186 aa14.43□□□□□ -0.1
GABRB3-217ENST00000635832 DAXXQ9UER7 740 aaPredicted RBP14.29□□□□□ -0.12
GABRB3-217ENST00000635832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.26□□□□□ -0.13
GABRB3-217ENST00000635832 HNRNPUL2Q1KMD3 747 aaKnown RBP14.26□□□□□ -0.13
GABRB3-217ENST00000635832 POLR3GLQ9BT43 218 aa14.13□□□□□ -0.15
GABRB3-217ENST00000635832 YTHDC1Q96MU7 727 aaKnown RBP14.11□□□□□ -0.15
GABRB3-217ENST00000635832 MYT1Q01538 1121 aa14.09□□□□□ -0.15
GABRB3-217ENST00000635832 SLC4A1APQ9BWU0 796 aaKnown RBP14.05□□□□□ -0.16
GABRB3-217ENST00000635832 CHIC1Q5VXU3 224 aa14.02□□□□□ -0.17
GABRB3-217ENST00000635832 ITGAEP38570 1179 aa13.99□□□□□ -0.17
GABRB3-217ENST00000635832 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.18
GABRB3-217ENST00000635832 ZNF316A6NFI3 1004 aaPredicted RBP13.88□□□□□ -0.19
GABRB3-217ENST00000635832 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
GABRB3-217ENST00000635832 CNGB1Q14028 1251 aaPredicted RBP13.84□□□□□ -0.19
GABRB3-217ENST00000635832 TRIM26Q12899 539 aaPredicted RBP13.82□□□□□ -0.2
GABRB3-217ENST00000635832 ZBTB47Q9UFB7 747 aaPredicted RBP13.81□□□□□ -0.2
GABRB3-217ENST00000635832 RTL5Q5HYW3 569 aaPredicted RBP13.77□□□□□ -0.21
GABRB3-217ENST00000635832 TRIM52Q96A61 297 aa13.69□□□□□ -0.22
GABRB3-217ENST00000635832 NEFMP07197 916 aa13.67□□□□□ -0.22
GABRB3-217ENST00000635832 FAM50AQ14320 339 aaKnown RBP13.65□□□□□ -0.22
GABRB3-217ENST00000635832 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
GABRB3-217ENST00000635832 BCANQ96GW7 911 aa13.63□□□□□ -0.23
GABRB3-217ENST00000635832 HRCP23327 699 aa13.58□□□□□ -0.23
GABRB3-217ENST00000635832 CANXP27824 592 aaKnown RBP13.54□□□□□ -0.24
GABRB3-217ENST00000635832 FBLN2P98095 1184 aa13.54□□□□□ -0.24
GABRB3-217ENST00000635832 ESF1Q9H501 851 aaKnown RBP13.53□□□□□ -0.24
GABRB3-217ENST00000635832 ZNF326Q5BKZ1 582 aaKnown RBP13.51□□□□□ -0.25
GABRB3-217ENST00000635832 NEUROD1Q13562 356 aa13.46□□□□□ -0.25
GABRB3-217ENST00000635832 ANP32CO43423 234 aa13.46□□□□□ -0.26
GABRB3-217ENST00000635832 BCL11AQ9H165 835 aa13.4□□□□□ -0.26
GABRB3-217ENST00000635832 DIEXFQ68CQ4 756 aaKnown RBP13.39□□□□□ -0.27
GABRB3-217ENST00000635832 CDK11AQ9UQ88 783 aaPredicted RBP13.39□□□□□ -0.27
GABRB3-217ENST00000635832 LOC105371045A0A1W2PR82 267 aa13.38□□□□□ -0.27
GABRB3-217ENST00000635832 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
GABRB3-217ENST00000635832 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
GABRB3-217ENST00000635832 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
GABRB3-217ENST00000635832 ANP32BQ92688 251 aaKnown RBP13.28□□□□□ -0.28
GABRB3-217ENST00000635832 ZNF777Q9ULD5 760 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-217ENST00000635832 CHGAP10645 457 aaKnown RBP13.24□□□□□ -0.29
GABRB3-217ENST00000635832 ABCC9O60706 1549 aa13.22□□□□□ -0.29
GABRB3-217ENST00000635832 HSP90AA1P07900 732 aaKnown RBP13.22□□□□□ -0.29
GABRB3-217ENST00000635832 ANP32AP39687 249 aaKnown RBP13.22□□□□□ -0.29
GABRB3-217ENST00000635832 PLPPR3Q6T4P5 718 aa13.21□□□□□ -0.3
GABRB3-217ENST00000635832 UPF2Q9HAU5 1272 aaKnown RBP13.19□□□□□ -0.3
GABRB3-217ENST00000635832 ARID3CA6NKF2 412 aa13.19□□□□□ -0.3
GABRB3-217ENST00000635832 NPM2Q86SE8 214 aaKnown RBP13.18□□□□□ -0.3
GABRB3-217ENST00000635832 CDK11BP21127 795 aaKnown RBP13.17□□□□□ -0.3
GABRB3-217ENST00000635832 P3H3Q8IVL6 736 aa13.15□□□□□ -0.3
GABRB3-217ENST00000635832 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
GABRB3-217ENST00000635832 A0A0G2JS52 829 aa13.07□□□□□ -0.32
GABRB3-217ENST00000635832 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.07□□□□□ -0.32
GABRB3-217ENST00000635832 TONSLQ96HA7 1378 aa13.04□□□□□ -0.32
GABRB3-217ENST00000635832 MYH16Q9H6N6 1097 aa13.02□□□□□ -0.33
GABRB3-217ENST00000635832 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
GABRB3-217ENST00000635832 WDR43Q15061 677 aaKnown RBP eCLIP12.99□□□□□ -0.33
GABRB3-217ENST00000635832 GTF3C3Q9Y5Q9 886 aa12.99□□□□□ -0.33
GABRB3-217ENST00000635832 TSPY4P0CV99 314 aa12.98□□□□□ -0.33
GABRB3-217ENST00000635832 TSPY10P0CW01 314 aa12.98□□□□□ -0.33
GABRB3-217ENST00000635832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.97□□□□□ -0.33
GABRB3-217ENST00000635832 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
GABRB3-217ENST00000635832 HAP1P54257 671 aaPredicted RBP12.96□□□□□ -0.33
GABRB3-217ENST00000635832 PPP1R15AO75807 674 aaPredicted RBP12.95□□□□□ -0.34
GABRB3-217ENST00000635832 ZBTB7CA1YPR0 619 aa12.93□□□□□ -0.34
GABRB3-217ENST00000635832 TMC1Q8TDI8 760 aa12.93□□□□□ -0.34
GABRB3-217ENST00000635832 HNRNPUQ00839 825 aaKnown RBP eCLIP12.89□□□□□ -0.35
GABRB3-217ENST00000635832 GLIPR1L2Q4G1C9 344 aa12.89□□□□□ -0.35
GABRB3-217ENST00000635832 FAM9BQ8IZU0 186 aa12.88□□□□□ -0.35
GABRB3-217ENST00000635832 NCLP19338 710 aaKnown RBP12.88□□□□□ -0.35
GABRB3-217ENST00000635832 CHMP7Q8WUX9 453 aaPredicted RBP12.86□□□□□ -0.35
GABRB3-217ENST00000635832 EIF5BO60841 1220 aaKnown RBP12.86□□□□□ -0.35
GABRB3-217ENST00000635832 SALL2Q9Y467 1007 aaPredicted RBP12.86□□□□□ -0.35
GABRB3-217ENST00000635832 CCDC136Q96JN2 1154 aa12.85□□□□□ -0.35
GABRB3-217ENST00000635832 ZRSR1Q15695 479 aaKnown RBP12.82□□□□□ -0.36
GABRB3-217ENST00000635832 ARID4BQ4LE39 1312 aaPredicted RBP12.82□□□□□ -0.36
GABRB3-217ENST00000635832 FKBP8Q14318 412 aa12.82□□□□□ -0.36
GABRB3-217ENST00000635832 KDM2AQ9Y2K7 1162 aa12.82□□□□□ -0.36
GABRB3-217ENST00000635832 ACIN1Q9UKV3 1341 aaKnown RBP12.82□□□□□ -0.36
GABRB3-217ENST00000635832 CHIC2Q9UKJ5 165 aa12.82□□□□□ -0.36
GABRB3-217ENST00000635832 PLEKHG5O94827 1062 aa12.81□□□□□ -0.36
GABRB3-217ENST00000635832 ARXQ96QS3 562 aa12.81□□□□□ -0.36
GABRB3-217ENST00000635832 CFAP53Q96M91 514 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 275.8 ms