RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 FAM236BA0A1B0GV22 79 aa14.08□□□□□ -0.16
CAPNS1-215ENST00000628018 A0A1B0GVX0 72 aa14.06□□□□□ -0.16
CAPNS1-215ENST00000628018 ABCA13Q86UQ4 5058 aa14.06□□□□□ -0.16
CAPNS1-215ENST00000628018 KRTAP29-1A8MX34 341 aaPredicted RBP14.05□□□□□ -0.16
CAPNS1-215ENST00000628018 IGHV6-1A0A0B4J1U7 121 aa14.01□□□□□ -0.17
CAPNS1-215ENST00000628018 HCG22E2RYF7 251 aa14□□□□□ -0.17
CAPNS1-215ENST00000628018 MMP24-AS1A0A0U1RRL7 71 aa13.98□□□□□ -0.17
CAPNS1-215ENST00000628018 C8orf17Q9NRJ1 99 aa13.97□□□□□ -0.17
CAPNS1-215ENST00000628018 RETNLBQ9BQ08 111 aa13.95□□□□□ -0.18
CAPNS1-215ENST00000628018 PCLOQ9Y6V0 5065 aa13.94□□□□□ -0.18
CAPNS1-215ENST00000628018 NOTCH2NLQ7Z3S9 236 aa13.94□□□□□ -0.18
CAPNS1-215ENST00000628018 WFDC13Q8IUB5 93 aa13.94□□□□□ -0.18
CAPNS1-215ENST00000628018 CASC2Q6XLA1 102 aa13.92□□□□□ -0.18
CAPNS1-215ENST00000628018 C8orf87E5RJ46 101 aa13.91□□□□□ -0.18
CAPNS1-215ENST00000628018 DMBT1Q9UGM3 2413 aaPredicted RBP13.9□□□□□ -0.18
CAPNS1-215ENST00000628018 ATOX1O00244 68 aa13.9□□□□□ -0.18
CAPNS1-215ENST00000628018 hDV103S1A0JD37 113 aa13.89□□□□□ -0.19
CAPNS1-215ENST00000628018 LINC00313P59037 77 aa13.87□□□□□ -0.19
CAPNS1-215ENST00000628018 PCP4P48539 62 aa13.83□□□□□ -0.2
CAPNS1-215ENST00000628018 TMEM254Q8TBM7 123 aa13.82□□□□□ -0.2
CAPNS1-215ENST00000628018 FP248Q71RG6 208 aaPredicted RBP13.81□□□□□ -0.2
CAPNS1-215ENST00000628018 ANAPC13Q9BS18 74 aa13.8□□□□□ -0.2
CAPNS1-215ENST00000628018 J3QL48 77 aa13.8□□□□□ -0.2
CAPNS1-215ENST00000628018 MRPL34Q9BQ48 92 aaKnown RBP13.8□□□□□ -0.2
CAPNS1-215ENST00000628018 OCR1Q9BZK8 76 aa13.78□□□□□ -0.2
CAPNS1-215ENST00000628018 SMIM20Q8N5G0 67 aa13.77□□□□□ -0.21
CAPNS1-215ENST00000628018 KRTAP16-1A8MUX0 517 aa13.76□□□□□ -0.21
CAPNS1-215ENST00000628018 TRAV7A0A075B6U4 112 aa13.73□□□□□ -0.21
CAPNS1-215ENST00000628018 SERP2Q8N6R1 65 aa13.73□□□□□ -0.21
CAPNS1-215ENST00000628018 IGLV7-46A0A075B6I9 117 aa13.69□□□□□ -0.22
CAPNS1-215ENST00000628018 C9orf92A6NGG3 77 aa13.69□□□□□ -0.22
CAPNS1-215ENST00000628018 Q8N9P0 234 aaPredicted RBP13.68□□□□□ -0.22
CAPNS1-215ENST00000628018 NDUFS5O43920 106 aa13.65□□□□□ -0.22
CAPNS1-215ENST00000628018 COX7CP15954 63 aa13.64□□□□□ -0.23
CAPNS1-215ENST00000628018 TP53AIP1Q9HCN2 124 aa13.64□□□□□ -0.23
CAPNS1-215ENST00000628018 PRR4Q16378 134 aa13.63□□□□□ -0.23
CAPNS1-215ENST00000628018 UQCRQO14949 82 aa13.62□□□□□ -0.23
CAPNS1-215ENST00000628018 KRTAP13-3Q3SY46 172 aa13.59□□□□□ -0.23
CAPNS1-215ENST00000628018 C20orf166-AS1Q96NR2 134 aa13.54□□□□□ -0.24
CAPNS1-215ENST00000628018 C5orf47Q569G3 176 aa13.54□□□□□ -0.24
CAPNS1-215ENST00000628018 A8MUU9 505 aa13.53□□□□□ -0.24
CAPNS1-215ENST00000628018 CCDC179H3BU77 68 aa13.53□□□□□ -0.24
CAPNS1-215ENST00000628018 TRAV22A0A0B4J277 110 aa13.49□□□□□ -0.25
CAPNS1-215ENST00000628018 TPRXLQ17RH7 258 aa13.49□□□□□ -0.25
CAPNS1-215ENST00000628018 Q5W150 140 aa13.48□□□□□ -0.25
CAPNS1-215ENST00000628018 H0Y9P7 68 aa13.47□□□□□ -0.25
CAPNS1-215ENST00000628018 C20orf197Q8N268 126 aa13.46□□□□□ -0.25
CAPNS1-215ENST00000628018 XP32Q5T750 250 aa13.45□□□□□ -0.26
CAPNS1-215ENST00000628018 Q75L30 129 aa13.45□□□□□ -0.26
CAPNS1-215ENST00000628018 HERC1Q15751 4861 aa13.44□□□□□ -0.26
CAPNS1-215ENST00000628018 MP68P56378 58 aa13.44□□□□□ -0.26
CAPNS1-215ENST00000628018 A0A0U1RQV1 116 aa13.41□□□□□ -0.26
CAPNS1-215ENST00000628018 KLKP1Q107X0 134 aa13.39□□□□□ -0.27
CAPNS1-215ENST00000628018 H3BPC8 53 aa13.39□□□□□ -0.27
CAPNS1-215ENST00000628018 ZCCHC13Q8WW36 166 aaKnown RBP13.39□□□□□ -0.27
CAPNS1-215ENST00000628018 SNURFQ9Y675 71 aa13.39□□□□□ -0.27
CAPNS1-215ENST00000628018 LINC00208Q96KT6 92 aa13.38□□□□□ -0.27
CAPNS1-215ENST00000628018 RPL37P61927 97 aaKnown RBP13.35□□□□□ -0.27
CAPNS1-215ENST00000628018 C1orf64Q8NEQ6 169 aa13.34□□□□□ -0.27
CAPNS1-215ENST00000628018 CYSTM1Q9H1C7 97 aa13.33□□□□□ -0.28
CAPNS1-215ENST00000628018 LPAP08519 4548 aa13.28□□□□□ -0.28
CAPNS1-215ENST00000628018 LOC101927531A0A1B0GV80 90 aa13.26□□□□□ -0.29
CAPNS1-215ENST00000628018 ATP11AUNQ6ZP68 121 aa13.24□□□□□ -0.29
CAPNS1-215ENST00000628018 IGKV2-30P06310 120 aa13.22□□□□□ -0.29
CAPNS1-215ENST00000628018 NDUFC1O43677 76 aa13.2□□□□□ -0.3
CAPNS1-215ENST00000628018 CYP4F30PQ9H0H9 118 aa13.19□□□□□ -0.3
CAPNS1-215ENST00000628018 H7BZZ5 65 aa13.18□□□□□ -0.3
CAPNS1-215ENST00000628018 LRP2P98164 4655 aa13.16□□□□□ -0.3
CAPNS1-215ENST00000628018 IGKV2D-30A0A075B6S6 120 aa13.14□□□□□ -0.31
CAPNS1-215ENST00000628018 C7orf65Q6ZTY9 151 aa13.11□□□□□ -0.31
CAPNS1-215ENST00000628018 PCOTHQ58A44 107 aa13.1□□□□□ -0.31
CAPNS1-215ENST00000628018 HMCN2Q8NDA2 5059 aa13.07□□□□□ -0.32
CAPNS1-215ENST00000628018 SPINK7P58062 85 aa13.06□□□□□ -0.32
CAPNS1-215ENST00000628018 TMEM258P61165 79 aa13.03□□□□□ -0.32
CAPNS1-215ENST00000628018 SEC61BP60468 96 aaKnown RBP13.01□□□□□ -0.33
CAPNS1-215ENST00000628018 HRES1P13985 223 aa12.97□□□□□ -0.33
CAPNS1-215ENST00000628018 SPANXA2-OT1Q8N9U9 137 aa12.97□□□□□ -0.33
CAPNS1-215ENST00000628018 FAM236DA0A1B0GTK5 79 aa12.92□□□□□ -0.34
CAPNS1-215ENST00000628018 FAM236CP0DP71 79 aa12.92□□□□□ -0.34
CAPNS1-215ENST00000628018 MUC17Q685J3 4493 aa12.88□□□□□ -0.35
CAPNS1-215ENST00000628018 ATP5EP56381 51 aaPredicted RBP12.88□□□□□ -0.35
CAPNS1-215ENST00000628018 C4orf26Q17RF5 130 aa12.83□□□□□ -0.36
CAPNS1-215ENST00000628018 KRTAP4-1Q9BYQ7 146 aa12.77□□□□□ -0.37
CAPNS1-215ENST00000628018 DMAC1Q96GE9 116 aa12.75□□□□□ -0.37
CAPNS1-215ENST00000628018 COX6B2Q6YFQ2 88 aa12.71□□□□□ -0.38
CAPNS1-215ENST00000628018 MPLKIPQ8TAP9 179 aa12.69□□□□□ -0.38
CAPNS1-215ENST00000628018 KRTAP3-1Q9BYR8 98 aa12.68□□□□□ -0.38
CAPNS1-215ENST00000628018 A8MUN3 132 aa12.66□□□□□ -0.38
CAPNS1-215ENST00000628018 UBR4Q5T4S7 5183 aa12.65□□□□□ -0.39
CAPNS1-215ENST00000628018 ACYP2P14621 99 aa12.64□□□□□ -0.39
CAPNS1-215ENST00000628018 SERP1Q9Y6X1 66 aa12.62□□□□□ -0.39
CAPNS1-215ENST00000628018 RBM12B-AS1Q9P1G2 102 aa12.59□□□□□ -0.39
CAPNS1-215ENST00000628018 COA5Q86WW8 74 aa12.56□□□□□ -0.4
CAPNS1-215ENST00000628018 RPS28P62857 69 aaKnown RBP12.53□□□□□ -0.4
CAPNS1-215ENST00000628018 H1FX-AS1Q4G0G2 97 aa12.44□□□□□ -0.42
CAPNS1-215ENST00000628018 MUC2Q02817 5179 aa12.44□□□□□ -0.42
CAPNS1-215ENST00000628018 KRTAP19-2Q3LHN2 52 aa12.43□□□□□ -0.42
CAPNS1-215ENST00000628018 CHKB-CPT1BH3BT56 60 aa12.41□□□□□ -0.42
CAPNS1-215ENST00000628018 RNF213Q63HN8 5207 aa12.34□□□□□ -0.43
CAPNS1-215ENST00000628018 S4R3F8 94 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms