RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 FBN3Q75N90 2809 aa5.56□□□□□ -1.52
VPS8-227ENST00000625842 LAMA1P25391 3075 aa5.56□□□□□ -1.52
VPS8-227ENST00000625842 NF1P21359 2839 aa5.54□□□□□ -1.52
VPS8-227ENST00000625842 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
VPS8-227ENST00000625842 CYSTM1Q9H1C7 97 aa5.53□□□□□ -1.52
VPS8-227ENST00000625842 PRUNE2Q8WUY3 3088 aa5.52□□□□□ -1.53
VPS8-227ENST00000625842 LRBAP50851 2863 aa5.51□□□□□ -1.53
VPS8-227ENST00000625842 H0YAA0 97 aa5.51□□□□□ -1.53
VPS8-227ENST00000625842 WDFY4Q6ZS81 3184 aa5.5□□□□□ -1.53
VPS8-227ENST00000625842 ASH1LQ9NR48 2969 aaKnown RBP5.48□□□□□ -1.53
VPS8-227ENST00000625842 COL12A1Q99715 3063 aa5.47□□□□□ -1.53
VPS8-227ENST00000625842 CELSR2Q9HCU4 2923 aa5.45□□□□□ -1.54
VPS8-227ENST00000625842 USP34Q70CQ2 3546 aa5.45□□□□□ -1.54
VPS8-227ENST00000625842 DCHS2Q6V1P9 2916 aa5.44□□□□□ -1.54
VPS8-227ENST00000625842 BRCA2P51587 3418 aa5.44□□□□□ -1.54
VPS8-227ENST00000625842 PKD1L1Q8TDX9 2849 aa5.41□□□□□ -1.54
VPS8-227ENST00000625842 ATMQ13315 3056 aa5.38□□□□□ -1.55
VPS8-227ENST00000625842 PDZD2O15018 2839 aa5.38□□□□□ -1.55
VPS8-227ENST00000625842 MXRA5Q9NR99 2828 aa5.37□□□□□ -1.55
VPS8-227ENST00000625842 TRIOO75962 3097 aa5.36□□□□□ -1.55
VPS8-227ENST00000625842 LAMA2P24043 3122 aaKnown RBP5.35□□□□□ -1.55
VPS8-227ENST00000625842 LAMA3Q16787 3333 aa5.34□□□□□ -1.56
VPS8-227ENST00000625842 FRYLO94915 3013 aa5.34□□□□□ -1.56
VPS8-227ENST00000625842 H3BS24 57 aa5.33□□□□□ -1.56
VPS8-227ENST00000625842 DMXL2Q8TDJ6 3036 aa5.32□□□□□ -1.56
VPS8-227ENST00000625842 NDUFAF8A1L188 74 aa5.32□□□□□ -1.56
VPS8-227ENST00000625842 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
VPS8-227ENST00000625842 CFAP54Q96N23 3096 aa5.3□□□□□ -1.56
VPS8-227ENST00000625842 ZZEF1O43149 2961 aa5.28□□□□□ -1.56
VPS8-227ENST00000625842 NBEAQ8NFP9 2946 aa5.27□□□□□ -1.57
VPS8-227ENST00000625842 EYSQ5T1H1 3165 aa5.27□□□□□ -1.57
VPS8-227ENST00000625842 TNRC18O15417 2968 aaPredicted RBP5.26□□□□□ -1.57
VPS8-227ENST00000625842 MT1HL1P0DM35 61 aa5.26□□□□□ -1.57
VPS8-227ENST00000625842 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
VPS8-227ENST00000625842 MKI67P46013 3256 aaKnown RBP5.2□□□□□ -1.58
VPS8-227ENST00000625842 VWFP04275 2813 aa5.2□□□□□ -1.58
VPS8-227ENST00000625842 FBN2P35556 2912 aa5.19□□□□□ -1.58
VPS8-227ENST00000625842 TGP01266 2768 aa5.19□□□□□ -1.58
VPS8-227ENST00000625842 WDFY3Q8IZQ1 3526 aa5.19□□□□□ -1.58
VPS8-227ENST00000625842 SRRM2Q9UQ35 2752 aaKnown RBP5.17□□□□□ -1.58
VPS8-227ENST00000625842 KRTAP12-2P59991 146 aa5.17□□□□□ -1.58
VPS8-227ENST00000625842 ZANQ9Y493 2812 aa5.16□□□□□ -1.58
VPS8-227ENST00000625842 DMXL1Q9Y485 3027 aa5.14□□□□□ -1.59
VPS8-227ENST00000625842 VPS13AQ96RL7 3174 aa5.14□□□□□ -1.59
VPS8-227ENST00000625842 MUC3AQ02505 3323 aa5.11□□□□□ -1.59
VPS8-227ENST00000625842 UNC80Q8N2C7 3258 aa5.08□□□□□ -1.6
VPS8-227ENST00000625842 KRTAP10-12P60413 245 aa5.08□□□□□ -1.6
VPS8-227ENST00000625842 XIRP2A4UGR9 3374 aa5.07□□□□□ -1.6
VPS8-227ENST00000625842 CDH23Q9H251 3354 aa5.07□□□□□ -1.6
VPS8-227ENST00000625842 MYO15AQ9UKN7 3530 aa5.06□□□□□ -1.6
VPS8-227ENST00000625842 CELSR1Q9NYQ6 3014 aa5.05□□□□□ -1.6
VPS8-227ENST00000625842 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
VPS8-227ENST00000625842 DNAH14Q0VDD8 3507 aa5.04□□□□□ -1.6
VPS8-227ENST00000625842 KRTAP4-5Q9BYR2 181 aa5.04□□□□□ -1.6
VPS8-227ENST00000625842 ADGRG4Q8IZF6 3080 aa5.04□□□□□ -1.6
VPS8-227ENST00000625842 HRNRQ86YZ3 2850 aaPredicted RBP5.02□□□□□ -1.61
VPS8-227ENST00000625842 BOD1L1Q8NFC6 3051 aa5.02□□□□□ -1.61
VPS8-227ENST00000625842 DMDP11532 3685 aa5.01□□□□□ -1.61
VPS8-227ENST00000625842 VCANP13611 3396 aa5.01□□□□□ -1.61
VPS8-227ENST00000625842 SPTBN5Q9NRC6 3674 aaKnown RBP5□□□□□ -1.61
VPS8-227ENST00000625842 KRTAP8-1Q8IUC2 63 aa4.98□□□□□ -1.61
VPS8-227ENST00000625842 SZT2Q5T011 3432 aa4.94□□□□□ -1.62
VPS8-227ENST00000625842 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
VPS8-227ENST00000625842 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
VPS8-227ENST00000625842 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
VPS8-227ENST00000625842 LORP23490 312 aaPredicted RBP4.89□□□□□ -1.63
VPS8-227ENST00000625842 SPEGQ15772 3267 aa4.86□□□□□ -1.63
VPS8-227ENST00000625842 COL6A3P12111 3177 aa4.86□□□□□ -1.63
VPS8-227ENST00000625842 OTOGQ6ZRI0 2925 aa4.86□□□□□ -1.63
VPS8-227ENST00000625842 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
VPS8-227ENST00000625842 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
VPS8-227ENST00000625842 ZFHX3Q15911 3703 aa4.83□□□□□ -1.64
VPS8-227ENST00000625842 SPENQ96T58 3664 aaKnown RBP4.8□□□□□ -1.64
VPS8-227ENST00000625842 FBN1P35555 2871 aaKnown RBP4.79□□□□□ -1.64
VPS8-227ENST00000625842 KRTAP10-6P60371 365 aaPredicted RBP4.79□□□□□ -1.64
VPS8-227ENST00000625842 FREM2Q5SZK8 3169 aa4.74□□□□□ -1.65
VPS8-227ENST00000625842 ASPMQ8IZT6 3477 aa4.73□□□□□ -1.65
VPS8-227ENST00000625842 COL7A1Q02388 2944 aa4.72□□□□□ -1.65
VPS8-227ENST00000625842 ZFHX4Q86UP3 3567 aa4.72□□□□□ -1.65
VPS8-227ENST00000625842 CELSR3Q9NYQ7 3312 aa4.69□□□□□ -1.66
VPS8-227ENST00000625842 KRTAP10-7P60409 375 aaPredicted RBP4.67□□□□□ -1.66
VPS8-227ENST00000625842 INE1O15225 51 aa4.67□□□□□ -1.66
VPS8-227ENST00000625842 MEGF8Q7Z7M0 2845 aa4.65□□□□□ -1.67
VPS8-227ENST00000625842 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
VPS8-227ENST00000625842 CFAP47Q6ZTR5 3102 aa4.64□□□□□ -1.67
VPS8-227ENST00000625842 MT1HP80294 61 aa4.63□□□□□ -1.67
VPS8-227ENST00000625842 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
VPS8-227ENST00000625842 KRTAP3-3Q9BYR6 98 aa4.59□□□□□ -1.67
VPS8-227ENST00000625842 LOC400499M0QZD8 3231 aa4.58□□□□□ -1.68
VPS8-227ENST00000625842 KRTAP3-2Q9BYR7 98 aa4.58□□□□□ -1.68
VPS8-227ENST00000625842 HUWE1Q7Z6Z7 4374 aaKnown RBP4.58□□□□□ -1.68
VPS8-227ENST00000625842 LCE3AQ5TA76 89 aa4.56□□□□□ -1.68
VPS8-227ENST00000625842 ALMS1Q8TCU4 4167 aa4.55□□□□□ -1.68
VPS8-227ENST00000625842 ANK3Q12955 4377 aaKnown RBP4.54□□□□□ -1.68
VPS8-227ENST00000625842 DCHS1Q96JQ0 3298 aa4.52□□□□□ -1.69
VPS8-227ENST00000625842 MT2AP02795 61 aa4.52□□□□□ -1.69
VPS8-227ENST00000625842 LAMA5O15230 3695 aa4.51□□□□□ -1.69
VPS8-227ENST00000625842 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
VPS8-227ENST00000625842 RELNP78509 3460 aa4.46□□□□□ -1.7
VPS8-227ENST00000625842 SPRR2GQ9BYE4 73 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms