RNA–Protein interactions for RNA: ENST00000622838.4

SEM1-222, Transcript of SEM1, 26S proteasome complex subunit, human

TSL 5

Gene SEM1, Length 885 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEM1-222	ENST00000622838	UBR5	O95071	2799 aa	Predicted RBP	0.94	□□□□□ -2.26
SEM1-222	ENST00000622838	ZNF469	Q96JG9	3925 aa	Predicted RBP	0.94	□□□□□ -2.26
SEM1-222	ENST00000622838	NAV2	Q8IVL1	2488 aa		0.93	□□□□□ -2.26
SEM1-222	ENST00000622838	COL6A5	A8TX70	2615 aa		0.93	□□□□□ -2.26
SEM1-222	ENST00000622838	NOTCH1	P46531	2555 aa		0.91	□□□□□ -2.26
SEM1-222	ENST00000622838	KRTAP21-1	Q3LI58	79 aa		0.91	□□□□□ -2.26
SEM1-222	ENST00000622838	HIVEP3	Q5T1R4	2406 aa		0.89	□□□□□ -2.27
SEM1-222	ENST00000622838	LYST	Q99698	3801 aa		0.89	□□□□□ -2.27
SEM1-222	ENST00000622838	PRKDC	P78527	4128 aa	Known RBP	0.89	□□□□□ -2.27
SEM1-222	ENST00000622838	SPART-AS1	P0CW21	52 aa		0.89	□□□□□ -2.27
SEM1-222	ENST00000622838	DEFB110	Q30KQ9	67 aa		0.89	□□□□□ -2.27
SEM1-222	ENST00000622838	ACAN	P16112	2415 aa		0.88	□□□□□ -2.27
SEM1-222	ENST00000622838	PKD1L1	Q8TDX9	2849 aa		0.87	□□□□□ -2.27
SEM1-222	ENST00000622838	MAP1B	P46821	2468 aa	Known RBP	0.87	□□□□□ -2.27
SEM1-222	ENST00000622838	TMEM167A	Q8TBQ9	72 aa		0.87	□□□□□ -2.27
SEM1-222	ENST00000622838	CHD7	Q9P2D1	2997 aa		0.87	□□□□□ -2.27
SEM1-222	ENST00000622838	APC2	O95996	2303 aa		0.86	□□□□□ -2.27
SEM1-222	ENST00000622838	SPRR2D	P22532	72 aa		0.86	□□□□□ -2.27
SEM1-222	ENST00000622838	PTPN13	Q12923	2485 aa		0.86	□□□□□ -2.27
SEM1-222	ENST00000622838	UNC79	Q9P2D8	2635 aa		0.85	□□□□□ -2.27
SEM1-222	ENST00000622838	ACACA	Q13085	2346 aa		0.84	□□□□□ -2.27
SEM1-222	ENST00000622838	STATH	P02808	62 aa		0.84	□□□□□ -2.27
SEM1-222	ENST00000622838	COX14	Q96I36	57 aa		0.84	□□□□□ -2.27
SEM1-222	ENST00000622838	STAB1	Q9NY15	2570 aa		0.83	□□□□□ -2.28
SEM1-222	ENST00000622838	GOLGB1	Q14789	3259 aa	Known RBP	0.83	□□□□□ -2.28
SEM1-222	ENST00000622838	SETD2	Q9BYW2	2564 aa	Predicted RBP	0.82	□□□□□ -2.28
SEM1-222	ENST00000622838	PDZD2	O15018	2839 aa		0.82	□□□□□ -2.28
SEM1-222	ENST00000622838	CD52	P31358	61 aa		0.82	□□□□□ -2.28
SEM1-222	ENST00000622838		Q9Y3F1	56 aa		0.82	□□□□□ -2.28
SEM1-222	ENST00000622838	ZFYVE26	Q68DK2	2539 aa		0.82	□□□□□ -2.28
SEM1-222	ENST00000622838	KMT2A	Q03164	3969 aa		0.82	□□□□□ -2.28
SEM1-222	ENST00000622838	PCNT	O95613	3336 aa		0.82	□□□□□ -2.28
SEM1-222	ENST00000622838	CENPF	P49454	3210 aa		0.81	□□□□□ -2.28
SEM1-222	ENST00000622838	SPRR2B	P35325	72 aa		0.8	□□□□□ -2.28
SEM1-222	ENST00000622838	DNAH12	Q6ZR08	3092 aa		0.8	□□□□□ -2.28
SEM1-222	ENST00000622838	TENM1	Q9UKZ4	2725 aa		0.8	□□□□□ -2.28
SEM1-222	ENST00000622838	SRCAP	Q6ZRS2	3230 aa		0.79	□□□□□ -2.28
SEM1-222	ENST00000622838	NF1	P21359	2839 aa		0.79	□□□□□ -2.28
SEM1-222	ENST00000622838	SACS	Q9NZJ4	4579 aa		0.79	□□□□□ -2.28
SEM1-222	ENST00000622838	SYNE1	Q8NF91	8797 aa	Known RBP	0.79	□□□□□ -2.28
SEM1-222	ENST00000622838	KRTAP8-1	Q8IUC2	63 aa		0.79	□□□□□ -2.28
SEM1-222	ENST00000622838	CEP350	Q5VT06	3117 aa		0.78	□□□□□ -2.28
SEM1-222	ENST00000622838	USP34	Q70CQ2	3546 aa		0.78	□□□□□ -2.28
SEM1-222	ENST00000622838	VPS13D	Q5THJ4	4388 aa		0.78	□□□□□ -2.28
SEM1-222	ENST00000622838	DNAH11	Q96DT5	4516 aa		0.78	□□□□□ -2.28
SEM1-222	ENST00000622838	RPL39P5	Q59GN2	51 aa		0.78	□□□□□ -2.28
SEM1-222	ENST00000622838	CCDC168	Q8NDH2	2452 aa		0.78	□□□□□ -2.28
SEM1-222	ENST00000622838	MTOR	P42345	2549 aa		0.78	□□□□□ -2.28
SEM1-222	ENST00000622838	TENM2	Q9NT68	2774 aa		0.78	□□□□□ -2.29
SEM1-222	ENST00000622838	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.78	□□□□□ -2.29
SEM1-222	ENST00000622838	SETX	Q7Z333	2677 aa	Known RBP	0.77	□□□□□ -2.29
SEM1-222	ENST00000622838	MYCBP2	O75592	4640 aa		0.77	□□□□□ -2.29
SEM1-222	ENST00000622838	DEFB108A	A8MXU0	73 aa		0.77	□□□□□ -2.29
SEM1-222	ENST00000622838	FLNC	Q14315	2725 aa		0.77	□□□□□ -2.29
SEM1-222	ENST00000622838	NBEA	Q8NFP9	2946 aa		0.77	□□□□□ -2.29
SEM1-222	ENST00000622838	VPS13B	Q7Z7G8	4022 aa		0.77	□□□□□ -2.29
SEM1-222	ENST00000622838	AHNAK2	Q8IVF2	5795 aa		0.77	□□□□□ -2.29
SEM1-222	ENST00000622838	COL6A3	P12111	3177 aa		0.76	□□□□□ -2.29
SEM1-222	ENST00000622838	DNAH14	Q0VDD8	3507 aa		0.76	□□□□□ -2.29
SEM1-222	ENST00000622838	SON	P18583	2426 aa	Known RBP	0.76	□□□□□ -2.29
SEM1-222	ENST00000622838	XIRP2	A4UGR9	3374 aa		0.76	□□□□□ -2.29
SEM1-222	ENST00000622838	FRY	Q5TBA9	3013 aa		0.75	□□□□□ -2.29
SEM1-222	ENST00000622838	RIF1	Q5UIP0	2472 aa	Known RBP	0.75	□□□□□ -2.29
SEM1-222	ENST00000622838	UTRN	P46939	3433 aa		0.75	□□□□□ -2.29
SEM1-222	ENST00000622838	SZT2	Q5T011	3432 aa		0.75	□□□□□ -2.29
SEM1-222	ENST00000622838	GCN1	Q92616	2671 aa	Known RBP	0.75	□□□□□ -2.29
SEM1-222	ENST00000622838	CUBN	O60494	3623 aa		0.75	□□□□□ -2.29
SEM1-222	ENST00000622838	COL7A1	Q02388	2944 aa		0.75	□□□□□ -2.29
SEM1-222	ENST00000622838	MT1A	P04731	61 aa		0.74	□□□□□ -2.29
SEM1-222	ENST00000622838	KRTAP6-2	Q3LI66	62 aa		0.74	□□□□□ -2.29
SEM1-222	ENST00000622838	UNC80	Q8N2C7	3258 aa		0.74	□□□□□ -2.29
SEM1-222	ENST00000622838	RANBP2	P49792	3224 aa	Known RBP	0.74	□□□□□ -2.29
SEM1-222	ENST00000622838	EP400	Q96L91	3159 aa		0.74	□□□□□ -2.29
SEM1-222	ENST00000622838	MGA	Q8IWI9	3026 aa		0.74	□□□□□ -2.29
SEM1-222	ENST00000622838	DMXL1	Q9Y485	3027 aa		0.74	□□□□□ -2.29
SEM1-222	ENST00000622838	FAM186A	A6NE01	2351 aa		0.74	□□□□□ -2.29
SEM1-222	ENST00000622838	VCAN	P13611	3396 aa		0.73	□□□□□ -2.29
SEM1-222	ENST00000622838	SPTBN4	Q9H254	2564 aa		0.73	□□□□□ -2.29
SEM1-222	ENST00000622838	WDR87	Q6ZQQ6	2873 aa		0.73	□□□□□ -2.29
SEM1-222	ENST00000622838	FRYL	O94915	3013 aa		0.73	□□□□□ -2.29
SEM1-222	ENST00000622838	DCHS2	Q6V1P9	2916 aa		0.73	□□□□□ -2.29
SEM1-222	ENST00000622838	C5orf42	Q9H799	3197 aa		0.73	□□□□□ -2.29
SEM1-222	ENST00000622838	CFAP54	Q96N23	3096 aa		0.73	□□□□□ -2.29
SEM1-222	ENST00000622838	ZZEF1	O43149	2961 aa		0.72	□□□□□ -2.29
SEM1-222	ENST00000622838	KALRN	O60229	2985 aa		0.72	□□□□□ -2.29
SEM1-222	ENST00000622838	HTT	P42858	3142 aa		0.72	□□□□□ -2.29
SEM1-222	ENST00000622838	SPTBN5	Q9NRC6	3674 aa	Known RBP	0.72	□□□□□ -2.29
SEM1-222	ENST00000622838	TRIO	O75962	3097 aa		0.72	□□□□□ -2.29
SEM1-222	ENST00000622838	MKI67	P46013	3256 aa	Known RBP	0.72	□□□□□ -2.29
SEM1-222	ENST00000622838	APELA	P0DMC3	54 aa		0.72	□□□□□ -2.29
SEM1-222	ENST00000622838	DEFB1	P60022	68 aa		0.72	□□□□□ -2.29
SEM1-222	ENST00000622838	DEFB133	Q30KQ1	61 aa		0.72	□□□□□ -2.29
SEM1-222	ENST00000622838	LRP1	Q07954	4544 aa	Known RBP	0.72	□□□□□ -2.29
SEM1-222	ENST00000622838	LAMA2	P24043	3122 aa	Known RBP	0.72	□□□□□ -2.29
SEM1-222	ENST00000622838	CFAP47	Q6ZTR5	3102 aa		0.72	□□□□□ -2.29
SEM1-222	ENST00000622838	LAMA1	P25391	3075 aa		0.71	□□□□□ -2.3
SEM1-222	ENST00000622838	COL12A1	Q99715	3063 aa		0.71	□□□□□ -2.3
SEM1-222	ENST00000622838	FREM2	Q5SZK8	3169 aa		0.71	□□□□□ -2.3
SEM1-222	ENST00000622838	DEFB108B	Q8NET1	73 aa		0.71	□□□□□ -2.3
SEM1-222	ENST00000622838	LAMA3	Q16787	3333 aa		0.71	□□□□□ -2.3

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