RNA–Protein interactions for RNA: ENST00000622838.4

SEM1-222, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 5

Gene SEM1, Length 885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-222ENST00000622838 AEBP2Q6ZN18 517 aaPredicted RBP17.75■□□□□ 0.43
SEM1-222ENST00000622838 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
SEM1-222ENST00000622838 SENP3Q9H4L4 574 aaPredicted RBP15.18■□□□□ 0.02
SEM1-222ENST00000622838 PHF23Q9BUL5 403 aaPredicted RBP14.94□□□□□ -0.02
SEM1-222ENST00000622838 POTEDQ86YR6 584 aa14.48□□□□□ -0.09
SEM1-222ENST00000622838 FOXD1Q16676 465 aa14.29□□□□□ -0.12
SEM1-222ENST00000622838 MSH5O43196 834 aa13.57□□□□□ -0.24
SEM1-222ENST00000622838 PIAS4Q8N2W9 510 aaPredicted RBP13.16□□□□□ -0.3
SEM1-222ENST00000622838 PPP6R1Q9UPN7 881 aa12.87□□□□□ -0.35
SEM1-222ENST00000622838 ADRA2BP18089 450 aa12.77□□□□□ -0.37
SEM1-222ENST00000622838 PLPPR3Q6T4P5 718 aa12.57□□□□□ -0.4
SEM1-222ENST00000622838 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
SEM1-222ENST00000622838 MAPK8IP2Q13387 824 aaPredicted RBP11.96□□□□□ -0.49
SEM1-222ENST00000622838 DMRT2Q9Y5R5 561 aa11.94□□□□□ -0.5
SEM1-222ENST00000622838 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
SEM1-222ENST00000622838 RNF39Q9H2S5 420 aa11.55□□□□□ -0.56
SEM1-222ENST00000622838 DCAF8L1A6NGE4 600 aa11.51□□□□□ -0.57
SEM1-222ENST00000622838 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
SEM1-222ENST00000622838 HOXD11P31277 338 aaPredicted RBP11.24□□□□□ -0.61
SEM1-222ENST00000622838 POTEHQ6S545 545 aa11.2□□□□□ -0.62
SEM1-222ENST00000622838 RNF216Q9NWF9 866 aaPredicted RBP10.97□□□□□ -0.65
SEM1-222ENST00000622838 PPP4R3CPQ6ZMV5 832 aa10.96□□□□□ -0.65
SEM1-222ENST00000622838 DNAJC5BQ9UF47 199 aa10.95□□□□□ -0.66
SEM1-222ENST00000622838 CNKSR2Q8WXI2 1034 aa10.89□□□□□ -0.67
SEM1-222ENST00000622838 SLC24A1O60721 1099 aa10.72□□□□□ -0.69
SEM1-222ENST00000622838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.71□□□□□ -0.69
SEM1-222ENST00000622838 DSG3P32926 999 aa10.6□□□□□ -0.71
SEM1-222ENST00000622838 EHMT2Q96KQ7 1210 aa10.54□□□□□ -0.72
SEM1-222ENST00000622838 SPINK5Q9NQ38 1064 aaPredicted RBP10.5□□□□□ -0.73
SEM1-222ENST00000622838 CAPN15O75808 1086 aa10.49□□□□□ -0.73
SEM1-222ENST00000622838 NCBP3Q53F19 620 aaKnown RBP10.46□□□□□ -0.73
SEM1-222ENST00000622838 U3KPZ7 1027 aaPredicted RBP10.42□□□□□ -0.74
SEM1-222ENST00000622838 ABCB7O75027 752 aa10.2□□□□□ -0.78
SEM1-222ENST00000622838 NPM3O75607 178 aaKnown RBP10.18□□□□□ -0.78
SEM1-222ENST00000622838 TRHP20396 242 aaPredicted RBP10.16□□□□□ -0.78
SEM1-222ENST00000622838 CHRDL2Q6WN34 429 aa10.16□□□□□ -0.78
SEM1-222ENST00000622838 SP7Q8TDD2 431 aaPredicted RBP10.16□□□□□ -0.78
SEM1-222ENST00000622838 RBM42Q9BTD8 480 aaKnown RBP10.06□□□□□ -0.8
SEM1-222ENST00000622838 ZNF219Q9P2Y4 722 aaPredicted RBP10.06□□□□□ -0.8
SEM1-222ENST00000622838 APLP2Q06481 763 aa9.97□□□□□ -0.81
SEM1-222ENST00000622838 KCNA4P22459 653 aa9.96□□□□□ -0.82
SEM1-222ENST00000622838 CSRNP3Q8WYN3 585 aa9.94□□□□□ -0.82
SEM1-222ENST00000622838 RTN4Q9NQC3 1192 aaKnown RBP9.94□□□□□ -0.82
SEM1-222ENST00000622838 SLC4A2P04920 1241 aa9.92□□□□□ -0.82
SEM1-222ENST00000622838 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
SEM1-222ENST00000622838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.82□□□□□ -0.84
SEM1-222ENST00000622838 HNRNPUL2Q1KMD3 747 aaKnown RBP9.82□□□□□ -0.84
SEM1-222ENST00000622838 HAX1O00165 279 aa9.8□□□□□ -0.84
SEM1-222ENST00000622838 PIP4P2Q8N4L2 257 aa9.79□□□□□ -0.84
SEM1-222ENST00000622838 POLA2Q14181 598 aa9.74□□□□□ -0.85
SEM1-222ENST00000622838 SAMD1Q6SPF0 538 aaPredicted RBP9.74□□□□□ -0.85
SEM1-222ENST00000622838 AKT1S1Q96B36 256 aa9.71□□□□□ -0.86
SEM1-222ENST00000622838 EVX2Q03828 476 aa9.68□□□□□ -0.86
SEM1-222ENST00000622838 REM2Q8IYK8 340 aaPredicted RBP9.66□□□□□ -0.86
SEM1-222ENST00000622838 SLC4A1APQ9BWU0 796 aaKnown RBP9.63□□□□□ -0.87
SEM1-222ENST00000622838 FXR2P51116 673 aaKnown RBP eCLIP9.61□□□□□ -0.87
SEM1-222ENST00000622838 PITPNM1O00562 1244 aa9.56□□□□□ -0.88
SEM1-222ENST00000622838 LHX8Q68G74 356 aa9.54□□□□□ -0.88
SEM1-222ENST00000622838 PLSCR2Q9NRY7 297 aa9.51□□□□□ -0.89
SEM1-222ENST00000622838 MYCNP04198 464 aaPredicted RBP9.49□□□□□ -0.89
SEM1-222ENST00000622838 OSCARQ8IYS5 282 aa9.44□□□□□ -0.9
SEM1-222ENST00000622838 ZBTB12Q9Y330 459 aaPredicted RBP9.41□□□□□ -0.9
SEM1-222ENST00000622838 DAXXQ9UER7 740 aaPredicted RBP9.4□□□□□ -0.9
SEM1-222ENST00000622838 GABBR2O75899 941 aa9.38□□□□□ -0.91
SEM1-222ENST00000622838 C19orf67A6NJJ6 358 aa9.33□□□□□ -0.92
SEM1-222ENST00000622838 PRKAR2AP13861 404 aaKnown RBP9.31□□□□□ -0.92
SEM1-222ENST00000622838 ATF5Q9Y2D1 282 aaPredicted RBP9.31□□□□□ -0.92
SEM1-222ENST00000622838 FOXD4L1Q9NU39 408 aa9.27□□□□□ -0.93
SEM1-222ENST00000622838 PRKCSHP14314 528 aaPredicted RBP9.25□□□□□ -0.93
SEM1-222ENST00000622838 ZBTB22O15209 634 aa9.22□□□□□ -0.93
SEM1-222ENST00000622838 POTEIP0CG38 1075 aa9.2□□□□□ -0.94
SEM1-222ENST00000622838 CLEC11AQ9Y240 323 aa9.17□□□□□ -0.94
SEM1-222ENST00000622838 TAOK2Q9UL54 1235 aa9.11□□□□□ -0.95
SEM1-222ENST00000622838 SPDYE1Q8NFV5 336 aaPredicted RBP9.1□□□□□ -0.95
SEM1-222ENST00000622838 BCANQ96GW7 911 aa9.1□□□□□ -0.95
SEM1-222ENST00000622838 SPDYE2BA6NHP3 402 aa9.09□□□□□ -0.95
SEM1-222ENST00000622838 SPDYE6P0CI01 402 aa9.09□□□□□ -0.95
SEM1-222ENST00000622838 SPDYE2Q495Y8 402 aa9.09□□□□□ -0.95
SEM1-222ENST00000622838 CHADLQ6NUI6 762 aa9.09□□□□□ -0.95
SEM1-222ENST00000622838 ARXQ96QS3 562 aa9.08□□□□□ -0.96
SEM1-222ENST00000622838 PLCB2Q00722 1185 aa9.04□□□□□ -0.96
SEM1-222ENST00000622838 POTEMA6NI47 508 aa9.02□□□□□ -0.97
SEM1-222ENST00000622838 TIMELESSQ9UNS1 1208 aa9.02□□□□□ -0.97
SEM1-222ENST00000622838 ATXN8OSP0DMR3 200 aa9.01□□□□□ -0.97
SEM1-222ENST00000622838 FBLN2P98095 1184 aa9.01□□□□□ -0.97
SEM1-222ENST00000622838 OTUD5Q96G74 571 aa8.98□□□□□ -0.97
SEM1-222ENST00000622838 CD44P16070 742 aaKnown RBP8.96□□□□□ -0.98
SEM1-222ENST00000622838 POTEGQ6S5H5 508 aa8.96□□□□□ -0.98
SEM1-222ENST00000622838 DCBLD2Q96PD2 775 aa8.96□□□□□ -0.98
SEM1-222ENST00000622838 TPRNQ4KMQ1 711 aa8.95□□□□□ -0.98
SEM1-222ENST00000622838 FKBP8Q14318 412 aa8.92□□□□□ -0.98
SEM1-222ENST00000622838 CLCN6P51797 869 aa8.91□□□□□ -0.98
SEM1-222ENST00000622838 HAP1P54257 671 aaPredicted RBP8.91□□□□□ -0.98
SEM1-222ENST00000622838 SSUH2Q9Y2M2 353 aa8.91□□□□□ -0.98
SEM1-222ENST00000622838 POTEB2H3BUK9 544 aa8.9□□□□□ -0.98
SEM1-222ENST00000622838 TULP1O00294 542 aaPredicted RBP8.9□□□□□ -0.98
SEM1-222ENST00000622838 PRR29P0C7W0 189 aa8.9□□□□□ -0.98
SEM1-222ENST00000622838 ZNF692Q9BU19 519 aaPredicted RBP8.9□□□□□ -0.98
SEM1-222ENST00000622838 PCDH10Q9P2E7 1040 aa8.86□□□□□ -0.99
SEM1-222ENST00000622838 FARP1Q9Y4F1 1045 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms