RNA–Protein interactions for RNA: ENST00000622580.4

TNNI1-207, Transcript of troponin I1, slow skeletal type, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNNI1, Length 6,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI1-207ENST00000622580 DNAH14Q0VDD8 3507 aa6.4□□□□□ -1.38
TNNI1-207ENST00000622580 HIVEP1P15822 2718 aa6.4□□□□□ -1.39
TNNI1-207ENST00000622580 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
TNNI1-207ENST00000622580 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
TNNI1-207ENST00000622580 XIRP2A4UGR9 3374 aa6.36□□□□□ -1.39
TNNI1-207ENST00000622580 DSPP15924 2871 aaKnown RBP6.35□□□□□ -1.39
TNNI1-207ENST00000622580 CRYBG3Q68DQ2 2970 aa6.35□□□□□ -1.39
TNNI1-207ENST00000622580 WDFY4Q6ZS81 3184 aa6.33□□□□□ -1.4
TNNI1-207ENST00000622580 PRUNE2Q8WUY3 3088 aa6.32□□□□□ -1.4
TNNI1-207ENST00000622580 ITPR1Q14643 2758 aa6.32□□□□□ -1.4
TNNI1-207ENST00000622580 LAMA1P25391 3075 aa6.31□□□□□ -1.4
TNNI1-207ENST00000622580 CELSR3Q9NYQ7 3312 aa6.3□□□□□ -1.4
TNNI1-207ENST00000622580 SZT2Q5T011 3432 aa6.29□□□□□ -1.4
TNNI1-207ENST00000622580 SPTBN5Q9NRC6 3674 aaKnown RBP6.27□□□□□ -1.41
TNNI1-207ENST00000622580 COL6A3P12111 3177 aa6.25□□□□□ -1.41
TNNI1-207ENST00000622580 APCP25054 2843 aa6.24□□□□□ -1.41
TNNI1-207ENST00000622580 UTP20O75691 2785 aaKnown RBP6.24□□□□□ -1.41
TNNI1-207ENST00000622580 FREM2Q5SZK8 3169 aa6.24□□□□□ -1.41
TNNI1-207ENST00000622580 KRTAP12-1P59990 96 aa6.22□□□□□ -1.41
TNNI1-207ENST00000622580 VCANP13611 3396 aa6.21□□□□□ -1.41
TNNI1-207ENST00000622580 VPS13AQ96RL7 3174 aa6.21□□□□□ -1.42
TNNI1-207ENST00000622580 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
TNNI1-207ENST00000622580 TENM2Q9NT68 2774 aa6.18□□□□□ -1.42
TNNI1-207ENST00000622580 LRBAP50851 2863 aa6.14□□□□□ -1.43
TNNI1-207ENST00000622580 KALRNO60229 2985 aa6.13□□□□□ -1.43
TNNI1-207ENST00000622580 REV3LO60673 3130 aa6.13□□□□□ -1.43
TNNI1-207ENST00000622580 USP34Q70CQ2 3546 aa6.08□□□□□ -1.44
TNNI1-207ENST00000622580 FLNCQ14315 2725 aa6.08□□□□□ -1.44
TNNI1-207ENST00000622580 KRTAP10-12P60413 245 aa6.07□□□□□ -1.44
TNNI1-207ENST00000622580 TNRC18O15417 2968 aaPredicted RBP6.05□□□□□ -1.44
TNNI1-207ENST00000622580 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
TNNI1-207ENST00000622580 NIPBLQ6KC79 2804 aaeCLIP6.04□□□□□ -1.44
TNNI1-207ENST00000622580 TENM1Q9UKZ4 2725 aa6.04□□□□□ -1.44
TNNI1-207ENST00000622580 NBEAQ8NFP9 2946 aa6.03□□□□□ -1.44
TNNI1-207ENST00000622580 MT1HL1P0DM35 61 aa6.03□□□□□ -1.44
TNNI1-207ENST00000622580 TACC2O95359 2948 aa6.02□□□□□ -1.45
TNNI1-207ENST00000622580 ATMQ13315 3056 aa6□□□□□ -1.45
TNNI1-207ENST00000622580 ZZEF1O43149 2961 aa6□□□□□ -1.45
TNNI1-207ENST00000622580 BOD1L1Q8NFC6 3051 aa5.99□□□□□ -1.45
TNNI1-207ENST00000622580 INE1O15225 51 aa5.98□□□□□ -1.45
TNNI1-207ENST00000622580 EYSQ5T1H1 3165 aa5.97□□□□□ -1.45
TNNI1-207ENST00000622580 ADGRG4Q8IZF6 3080 aa5.97□□□□□ -1.45
TNNI1-207ENST00000622580 DMXL2Q8TDJ6 3036 aa5.97□□□□□ -1.45
TNNI1-207ENST00000622580 ASH1LQ9NR48 2969 aaKnown RBP5.95□□□□□ -1.46
TNNI1-207ENST00000622580 FRYLO94915 3013 aa5.94□□□□□ -1.46
TNNI1-207ENST00000622580 COL12A1Q99715 3063 aa5.93□□□□□ -1.46
TNNI1-207ENST00000622580 KRTAP4-5Q9BYR2 181 aa5.93□□□□□ -1.46
TNNI1-207ENST00000622580 KRTAP10-6P60371 365 aaPredicted RBP5.92□□□□□ -1.46
TNNI1-207ENST00000622580 TENM3Q9P273 2699 aa5.91□□□□□ -1.46
TNNI1-207ENST00000622580 CFAP47Q6ZTR5 3102 aa5.89□□□□□ -1.47
TNNI1-207ENST00000622580 HRNRQ86YZ3 2850 aaPredicted RBP5.88□□□□□ -1.47
TNNI1-207ENST00000622580 SPEGQ15772 3267 aa5.85□□□□□ -1.47
TNNI1-207ENST00000622580 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
TNNI1-207ENST00000622580 LORP23490 312 aaPredicted RBP5.81□□□□□ -1.48
TNNI1-207ENST00000622580 CELSR2Q9HCU4 2923 aa5.8□□□□□ -1.48
TNNI1-207ENST00000622580 MYO15AQ9UKN7 3530 aa5.8□□□□□ -1.48
TNNI1-207ENST00000622580 DCHS2Q6V1P9 2916 aa5.8□□□□□ -1.48
TNNI1-207ENST00000622580 TGP01266 2768 aa5.78□□□□□ -1.48
TNNI1-207ENST00000622580 KRTAP12-3P60328 96 aa5.78□□□□□ -1.48
TNNI1-207ENST00000622580 DMXL1Q9Y485 3027 aa5.76□□□□□ -1.49
TNNI1-207ENST00000622580 NF1P21359 2839 aa5.74□□□□□ -1.49
TNNI1-207ENST00000622580 ASPMQ8IZT6 3477 aa5.74□□□□□ -1.49
TNNI1-207ENST00000622580 ZANQ9Y493 2812 aa5.72□□□□□ -1.49
TNNI1-207ENST00000622580 LOC400499M0QZD8 3231 aa5.69□□□□□ -1.5
TNNI1-207ENST00000622580 ALMS1Q8TCU4 4167 aa5.69□□□□□ -1.5
TNNI1-207ENST00000622580 KRTAP3-2Q9BYR7 98 aa5.67□□□□□ -1.5
TNNI1-207ENST00000622580 WDFY3Q8IZQ1 3526 aa5.66□□□□□ -1.5
TNNI1-207ENST00000622580 ANK3Q12955 4377 aaKnown RBP5.65□□□□□ -1.51
TNNI1-207ENST00000622580 KRTAP10-4P60372 401 aaPredicted RBP5.64□□□□□ -1.51
TNNI1-207ENST00000622580 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
TNNI1-207ENST00000622580 KRTAP3-3Q9BYR6 98 aa5.64□□□□□ -1.51
TNNI1-207ENST00000622580 MUC3AQ02505 3323 aa5.64□□□□□ -1.51
TNNI1-207ENST00000622580 DCHS1Q96JQ0 3298 aa5.63□□□□□ -1.51
TNNI1-207ENST00000622580 CELSR1Q9NYQ6 3014 aa5.63□□□□□ -1.51
TNNI1-207ENST00000622580 ZFHX4Q86UP3 3567 aa5.61□□□□□ -1.51
TNNI1-207ENST00000622580 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
TNNI1-207ENST00000622580 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
TNNI1-207ENST00000622580 PKD1L1Q8TDX9 2849 aa5.57□□□□□ -1.52
TNNI1-207ENST00000622580 FBN2P35556 2912 aa5.56□□□□□ -1.52
TNNI1-207ENST00000622580 RELNP78509 3460 aa5.56□□□□□ -1.52
TNNI1-207ENST00000622580 DMDP11532 3685 aa5.55□□□□□ -1.52
TNNI1-207ENST00000622580 HUWE1Q7Z6Z7 4374 aaKnown RBP5.55□□□□□ -1.52
TNNI1-207ENST00000622580 NBPF19A0A087WUL8 3843 aa5.55□□□□□ -1.52
TNNI1-207ENST00000622580 PDZD2O15018 2839 aa5.54□□□□□ -1.52
TNNI1-207ENST00000622580 CSMD1Q96PZ7 3565 aa5.54□□□□□ -1.52
TNNI1-207ENST00000622580 MXRA5Q9NR99 2828 aa5.53□□□□□ -1.52
TNNI1-207ENST00000622580 FBN3Q75N90 2809 aa5.53□□□□□ -1.52
TNNI1-207ENST00000622580 VWFP04275 2813 aa5.49□□□□□ -1.53
TNNI1-207ENST00000622580 SMG1Q96Q15 3661 aaKnown RBP5.46□□□□□ -1.54
TNNI1-207ENST00000622580 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
TNNI1-207ENST00000622580 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
TNNI1-207ENST00000622580 LAMA5O15230 3695 aa5.43□□□□□ -1.54
TNNI1-207ENST00000622580 MT1HP80294 61 aa5.42□□□□□ -1.54
TNNI1-207ENST00000622580 BSNQ9UPA5 3926 aa5.33□□□□□ -1.56
TNNI1-207ENST00000622580 SVEP1Q4LDE5 3571 aa5.26□□□□□ -1.57
TNNI1-207ENST00000622580 MT2AP02795 61 aa5.26□□□□□ -1.57
TNNI1-207ENST00000622580 SPENQ96T58 3664 aaKnown RBP5.26□□□□□ -1.57
TNNI1-207ENST00000622580 SPRR2EP22531 72 aa5.25□□□□□ -1.57
TNNI1-207ENST00000622580 SPRR2BP35325 72 aa5.25□□□□□ -1.57
TNNI1-207ENST00000622580 SPRR2AP35326 72 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms