RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 KALRNO60229 2985 aa5.73□□□□□ -1.49
COL25A1-209ENST00000622134 ATMQ13315 3056 aa5.72□□□□□ -1.49
COL25A1-209ENST00000622134 REV3LO60673 3130 aa5.72□□□□□ -1.49
COL25A1-209ENST00000622134 H0YAA0 97 aa5.72□□□□□ -1.49
COL25A1-209ENST00000622134 FREM2Q5SZK8 3169 aa5.72□□□□□ -1.49
COL25A1-209ENST00000622134 LRBAP50851 2863 aa5.71□□□□□ -1.5
COL25A1-209ENST00000622134 CDH23Q9H251 3354 aa5.71□□□□□ -1.5
COL25A1-209ENST00000622134 SZT2Q5T011 3432 aa5.68□□□□□ -1.5
COL25A1-209ENST00000622134 VPS13AQ96RL7 3174 aa5.67□□□□□ -1.5
COL25A1-209ENST00000622134 KRTAP1-4P0C5Y4 121 aa5.67□□□□□ -1.5
COL25A1-209ENST00000622134 XIRP2A4UGR9 3374 aa5.66□□□□□ -1.5
COL25A1-209ENST00000622134 A0A1B0GVY2 172 aa5.65□□□□□ -1.51
COL25A1-209ENST00000622134 EYSQ5T1H1 3165 aa5.65□□□□□ -1.51
COL25A1-209ENST00000622134 DMXL2Q8TDJ6 3036 aa5.64□□□□□ -1.51
COL25A1-209ENST00000622134 ASH1LQ9NR48 2969 aaKnown RBP5.64□□□□□ -1.51
COL25A1-209ENST00000622134 XP32Q5T750 250 aa5.62□□□□□ -1.51
COL25A1-209ENST00000622134 CRYBG3Q68DQ2 2970 aa5.62□□□□□ -1.51
COL25A1-209ENST00000622134 COL6A3P12111 3177 aa5.62□□□□□ -1.51
COL25A1-209ENST00000622134 ZZEF1O43149 2961 aa5.61□□□□□ -1.51
COL25A1-209ENST00000622134 P0C880 135 aa5.61□□□□□ -1.51
COL25A1-209ENST00000622134 C10orf95Q9H7T3 257 aa5.59□□□□□ -1.51
COL25A1-209ENST00000622134 TENM3Q9P273 2699 aa5.59□□□□□ -1.51
COL25A1-209ENST00000622134 LAMA1P25391 3075 aa5.58□□□□□ -1.52
COL25A1-209ENST00000622134 TENM1Q9UKZ4 2725 aa5.57□□□□□ -1.52
COL25A1-209ENST00000622134 KRTAP13-3Q3SY46 172 aa5.57□□□□□ -1.52
COL25A1-209ENST00000622134 CELSR2Q9HCU4 2923 aa5.56□□□□□ -1.52
COL25A1-209ENST00000622134 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
COL25A1-209ENST00000622134 DNAH14Q0VDD8 3507 aa5.55□□□□□ -1.52
COL25A1-209ENST00000622134 DCHS2Q6V1P9 2916 aa5.55□□□□□ -1.52
COL25A1-209ENST00000622134 NF1P21359 2839 aa5.54□□□□□ -1.52
COL25A1-209ENST00000622134 KRTAP10-8P60410 259 aa5.54□□□□□ -1.52
COL25A1-209ENST00000622134 MXRA5Q9NR99 2828 aa5.54□□□□□ -1.52
COL25A1-209ENST00000622134 TENM2Q9NT68 2774 aa5.54□□□□□ -1.52
COL25A1-209ENST00000622134 VCANP13611 3396 aa5.53□□□□□ -1.52
COL25A1-209ENST00000622134 ZANQ9Y493 2812 aa5.53□□□□□ -1.52
COL25A1-209ENST00000622134 CELSR3Q9NYQ7 3312 aa5.51□□□□□ -1.53
COL25A1-209ENST00000622134 ADGRG4Q8IZF6 3080 aa5.5□□□□□ -1.53
COL25A1-209ENST00000622134 SPTBN5Q9NRC6 3674 aaKnown RBP5.49□□□□□ -1.53
COL25A1-209ENST00000622134 TNP1P09430 55 aa5.46□□□□□ -1.54
COL25A1-209ENST00000622134 DMXL1Q9Y485 3027 aa5.45□□□□□ -1.54
COL25A1-209ENST00000622134 PRO2289Q9P1D8 64 aa5.45□□□□□ -1.54
COL25A1-209ENST00000622134 USP34Q70CQ2 3546 aa5.45□□□□□ -1.54
COL25A1-209ENST00000622134 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
COL25A1-209ENST00000622134 HRNRQ86YZ3 2850 aaPredicted RBP5.4□□□□□ -1.54
COL25A1-209ENST00000622134 SPEGQ15772 3267 aa5.38□□□□□ -1.55
COL25A1-209ENST00000622134 BOD1L1Q8NFC6 3051 aa5.37□□□□□ -1.55
COL25A1-209ENST00000622134 PDZD2O15018 2839 aa5.36□□□□□ -1.55
COL25A1-209ENST00000622134 PKD1L1Q8TDX9 2849 aa5.28□□□□□ -1.56
COL25A1-209ENST00000622134 FBN2P35556 2912 aa5.25□□□□□ -1.57
COL25A1-209ENST00000622134 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
COL25A1-209ENST00000622134 TGP01266 2768 aa5.23□□□□□ -1.57
COL25A1-209ENST00000622134 MYO15AQ9UKN7 3530 aa5.23□□□□□ -1.57
COL25A1-209ENST00000622134 CFAP47Q6ZTR5 3102 aa5.22□□□□□ -1.57
COL25A1-209ENST00000622134 OTOGQ6ZRI0 2925 aa5.21□□□□□ -1.57
COL25A1-209ENST00000622134 KRTAP12-2P59991 146 aa5.21□□□□□ -1.57
COL25A1-209ENST00000622134 CELSR1Q9NYQ6 3014 aa5.2□□□□□ -1.58
COL25A1-209ENST00000622134 LOC400499M0QZD8 3231 aa5.19□□□□□ -1.58
COL25A1-209ENST00000622134 KRTAP12-1P59990 96 aa5.16□□□□□ -1.58
COL25A1-209ENST00000622134 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
COL25A1-209ENST00000622134 MUC3AQ02505 3323 aa5.1□□□□□ -1.59
COL25A1-209ENST00000622134 KRTAP13-4Q3LI77 160 aa5.1□□□□□ -1.59
COL25A1-209ENST00000622134 VWFP04275 2813 aa5.09□□□□□ -1.59
COL25A1-209ENST00000622134 MT1HL1P0DM35 61 aa5.07□□□□□ -1.6
COL25A1-209ENST00000622134 KRTAP10-6P60371 365 aaPredicted RBP5.07□□□□□ -1.6
COL25A1-209ENST00000622134 FBN3Q75N90 2809 aa5.07□□□□□ -1.6
COL25A1-209ENST00000622134 DCHS1Q96JQ0 3298 aa5.03□□□□□ -1.6
COL25A1-209ENST00000622134 INE1O15225 51 aa5□□□□□ -1.61
COL25A1-209ENST00000622134 WDFY3Q8IZQ1 3526 aa4.98□□□□□ -1.61
COL25A1-209ENST00000622134 FBN1P35555 2871 aaKnown RBP4.95□□□□□ -1.62
COL25A1-209ENST00000622134 DMDP11532 3685 aa4.94□□□□□ -1.62
COL25A1-209ENST00000622134 ASPMQ8IZT6 3477 aa4.92□□□□□ -1.62
COL25A1-209ENST00000622134 ZFHX3Q15911 3703 aa4.91□□□□□ -1.62
COL25A1-209ENST00000622134 SRRM2Q9UQ35 2752 aaKnown RBP4.91□□□□□ -1.62
COL25A1-209ENST00000622134 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
COL25A1-209ENST00000622134 RELNP78509 3460 aa4.91□□□□□ -1.62
COL25A1-209ENST00000622134 LAMA5O15230 3695 aa4.9□□□□□ -1.62
COL25A1-209ENST00000622134 KRTAP3-2Q9BYR7 98 aa4.89□□□□□ -1.63
COL25A1-209ENST00000622134 ANK3Q12955 4377 aaKnown RBP4.89□□□□□ -1.63
COL25A1-209ENST00000622134 KRTAP4-5Q9BYR2 181 aa4.87□□□□□ -1.63
COL25A1-209ENST00000622134 ZFHX4Q86UP3 3567 aa4.85□□□□□ -1.63
COL25A1-209ENST00000622134 CSMD1Q96PZ7 3565 aa4.83□□□□□ -1.64
COL25A1-209ENST00000622134 KRTAP3-3Q9BYR6 98 aa4.81□□□□□ -1.64
COL25A1-209ENST00000622134 MEGF8Q7Z7M0 2845 aa4.78□□□□□ -1.64
COL25A1-209ENST00000622134 NBPF19A0A087WUL8 3843 aa4.78□□□□□ -1.64
COL25A1-209ENST00000622134 BSNQ9UPA5 3926 aa4.75□□□□□ -1.65
COL25A1-209ENST00000622134 SMG1Q96Q15 3661 aaKnown RBP4.73□□□□□ -1.65
COL25A1-209ENST00000622134 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
COL25A1-209ENST00000622134 COL7A1Q02388 2944 aa4.69□□□□□ -1.66
COL25A1-209ENST00000622134 ALMS1Q8TCU4 4167 aa4.67□□□□□ -1.66
COL25A1-209ENST00000622134 SVEP1Q4LDE5 3571 aa4.6□□□□□ -1.67
COL25A1-209ENST00000622134 HUWE1Q7Z6Z7 4374 aaKnown RBP4.6□□□□□ -1.67
COL25A1-209ENST00000622134 SPENQ96T58 3664 aaKnown RBP4.59□□□□□ -1.68
COL25A1-209ENST00000622134 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
COL25A1-209ENST00000622134 AKAP9Q99996 3911 aa4.52□□□□□ -1.69
COL25A1-209ENST00000622134 CUBNO60494 3623 aa4.49□□□□□ -1.69
COL25A1-209ENST00000622134 DNAH1Q9P2D7 4330 aa4.46□□□□□ -1.7
COL25A1-209ENST00000622134 TRRAPQ9Y4A5 3859 aa4.46□□□□□ -1.7
COL25A1-209ENST00000622134 CSMD2Q7Z408 3487 aa4.45□□□□□ -1.7
COL25A1-209ENST00000622134 DNAH11Q96DT5 4516 aa4.43□□□□□ -1.7
COL25A1-209ENST00000622134 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms