RNA–Protein interactions for RNA: ENST00000622089.4

ITSN2-213, Transcript of intersectin 2, humanhuman

TSL 5 BASIC

Gene ITSN2, Length 5,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-213ENST00000622089 MKI67P46013 3256 aaKnown RBP4.26□□□□□ -1.73
ITSN2-213ENST00000622089 HTTP42858 3142 aa4.26□□□□□ -1.73
ITSN2-213ENST00000622089 DNAH14Q0VDD8 3507 aa4.23□□□□□ -1.73
ITSN2-213ENST00000622089 UTP20O75691 2785 aaKnown RBP4.22□□□□□ -1.73
ITSN2-213ENST00000622089 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
ITSN2-213ENST00000622089 LAMA2P24043 3122 aaKnown RBP4.21□□□□□ -1.73
ITSN2-213ENST00000622089 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
ITSN2-213ENST00000622089 FRYQ5TBA9 3013 aa4.2□□□□□ -1.74
ITSN2-213ENST00000622089 REV3LO60673 3130 aa4.19□□□□□ -1.74
ITSN2-213ENST00000622089 HIVEP1P15822 2718 aa4.19□□□□□ -1.74
ITSN2-213ENST00000622089 DSPP15924 2871 aaKnown RBP4.18□□□□□ -1.74
ITSN2-213ENST00000622089 KRTAP3-2Q9BYR7 98 aa4.17□□□□□ -1.74
ITSN2-213ENST00000622089 CDH23Q9H251 3354 aa4.16□□□□□ -1.74
ITSN2-213ENST00000622089 UNC80Q8N2C7 3258 aa4.16□□□□□ -1.74
ITSN2-213ENST00000622089 CELSR3Q9NYQ7 3312 aa4.16□□□□□ -1.74
ITSN2-213ENST00000622089 NIPBLQ6KC79 2804 aaeCLIP4.16□□□□□ -1.74
ITSN2-213ENST00000622089 XIRP2A4UGR9 3374 aa4.15□□□□□ -1.75
ITSN2-213ENST00000622089 TGP01266 2768 aa4.15□□□□□ -1.75
ITSN2-213ENST00000622089 TRIOO75962 3097 aa4.14□□□□□ -1.75
ITSN2-213ENST00000622089 LRBAP50851 2863 aa4.14□□□□□ -1.75
ITSN2-213ENST00000622089 KALRNO60229 2985 aa4.14□□□□□ -1.75
ITSN2-213ENST00000622089 KRTAP3-3Q9BYR6 98 aa4.13□□□□□ -1.75
ITSN2-213ENST00000622089 VPS13AQ96RL7 3174 aa4.13□□□□□ -1.75
ITSN2-213ENST00000622089 LAMA3Q16787 3333 aa4.09□□□□□ -1.75
ITSN2-213ENST00000622089 WDFY4Q6ZS81 3184 aa4.08□□□□□ -1.76
ITSN2-213ENST00000622089 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
ITSN2-213ENST00000622089 MT1HL1P0DM35 61 aa4.08□□□□□ -1.76
ITSN2-213ENST00000622089 TENM4Q6N022 2769 aa4.07□□□□□ -1.76
ITSN2-213ENST00000622089 SZT2Q5T011 3432 aa4.07□□□□□ -1.76
ITSN2-213ENST00000622089 COL6A3P12111 3177 aa4.05□□□□□ -1.76
ITSN2-213ENST00000622089 PRUNE2Q8WUY3 3088 aa4.05□□□□□ -1.76
ITSN2-213ENST00000622089 BRCA2P51587 3418 aa4.03□□□□□ -1.76
ITSN2-213ENST00000622089 CRCT1Q9UGL9 99 aa4.03□□□□□ -1.76
ITSN2-213ENST00000622089 FLNCQ14315 2725 aa4.01□□□□□ -1.77
ITSN2-213ENST00000622089 LCE3AQ5TA76 89 aa4□□□□□ -1.77
ITSN2-213ENST00000622089 VCANP13611 3396 aa4□□□□□ -1.77
ITSN2-213ENST00000622089 USP34Q70CQ2 3546 aa4□□□□□ -1.77
ITSN2-213ENST00000622089 ATMQ13315 3056 aa4□□□□□ -1.77
ITSN2-213ENST00000622089 ZZEF1O43149 2961 aa3.98□□□□□ -1.77
ITSN2-213ENST00000622089 ASH1LQ9NR48 2969 aaKnown RBP3.98□□□□□ -1.77
ITSN2-213ENST00000622089 TENM2Q9NT68 2774 aa3.98□□□□□ -1.77
ITSN2-213ENST00000622089 TACC2O95359 2948 aa3.98□□□□□ -1.77
ITSN2-213ENST00000622089 NBEAQ8NFP9 2946 aa3.97□□□□□ -1.77
ITSN2-213ENST00000622089 HRNRQ86YZ3 2850 aaPredicted RBP3.97□□□□□ -1.77
ITSN2-213ENST00000622089 CRYBG3Q68DQ2 2970 aa3.96□□□□□ -1.78
ITSN2-213ENST00000622089 SPEGQ15772 3267 aa3.95□□□□□ -1.78
ITSN2-213ENST00000622089 DCHS1Q96JQ0 3298 aa3.95□□□□□ -1.78
ITSN2-213ENST00000622089 COL12A1Q99715 3063 aa3.94□□□□□ -1.78
ITSN2-213ENST00000622089 EYSQ5T1H1 3165 aa3.94□□□□□ -1.78
ITSN2-213ENST00000622089 KRTAP10-4P60372 401 aaPredicted RBP3.94□□□□□ -1.78
ITSN2-213ENST00000622089 CELSR2Q9HCU4 2923 aa3.93□□□□□ -1.78
ITSN2-213ENST00000622089 TENM3Q9P273 2699 aa3.93□□□□□ -1.78
ITSN2-213ENST00000622089 DCHS2Q6V1P9 2916 aa3.93□□□□□ -1.78
ITSN2-213ENST00000622089 TENM1Q9UKZ4 2725 aa3.92□□□□□ -1.78
ITSN2-213ENST00000622089 ADGRG4Q8IZF6 3080 aa3.9□□□□□ -1.78
ITSN2-213ENST00000622089 MYO15AQ9UKN7 3530 aa3.89□□□□□ -1.79
ITSN2-213ENST00000622089 HUWE1Q7Z6Z7 4374 aaKnown RBP3.89□□□□□ -1.79
ITSN2-213ENST00000622089 ALMS1Q8TCU4 4167 aa3.89□□□□□ -1.79
ITSN2-213ENST00000622089 DMXL2Q8TDJ6 3036 aa3.89□□□□□ -1.79
ITSN2-213ENST00000622089 FRYLO94915 3013 aa3.88□□□□□ -1.79
ITSN2-213ENST00000622089 TNRC18O15417 2968 aaPredicted RBP3.84□□□□□ -1.8
ITSN2-213ENST00000622089 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
ITSN2-213ENST00000622089 WDFY3Q8IZQ1 3526 aa3.83□□□□□ -1.8
ITSN2-213ENST00000622089 NF1P21359 2839 aa3.83□□□□□ -1.8
ITSN2-213ENST00000622089 CFAP47Q6ZTR5 3102 aa3.82□□□□□ -1.8
ITSN2-213ENST00000622089 CELSR1Q9NYQ6 3014 aa3.82□□□□□ -1.8
ITSN2-213ENST00000622089 KRTAP8-1Q8IUC2 63 aa3.82□□□□□ -1.8
ITSN2-213ENST00000622089 LORP23490 312 aaPredicted RBP3.81□□□□□ -1.8
ITSN2-213ENST00000622089 CSMD1Q96PZ7 3565 aa3.8□□□□□ -1.8
ITSN2-213ENST00000622089 ZANQ9Y493 2812 aa3.8□□□□□ -1.8
ITSN2-213ENST00000622089 BOD1L1Q8NFC6 3051 aa3.78□□□□□ -1.8
ITSN2-213ENST00000622089 ANK3Q12955 4377 aaKnown RBP3.78□□□□□ -1.8
ITSN2-213ENST00000622089 MUC3AQ02505 3323 aa3.78□□□□□ -1.8
ITSN2-213ENST00000622089 KRTAP4-5Q9BYR2 181 aa3.76□□□□□ -1.81
ITSN2-213ENST00000622089 ZFHX3Q15911 3703 aa3.76□□□□□ -1.81
ITSN2-213ENST00000622089 FBN2P35556 2912 aa3.74□□□□□ -1.81
ITSN2-213ENST00000622089 SPTBN5Q9NRC6 3674 aaKnown RBP3.73□□□□□ -1.81
ITSN2-213ENST00000622089 PDZD2O15018 2839 aa3.71□□□□□ -1.82
ITSN2-213ENST00000622089 DMXL1Q9Y485 3027 aa3.71□□□□□ -1.82
ITSN2-213ENST00000622089 MXRA5Q9NR99 2828 aa3.71□□□□□ -1.82
ITSN2-213ENST00000622089 DNAH2Q9P225 4427 aa3.7□□□□□ -1.82
ITSN2-213ENST00000622089 ZFHX4Q86UP3 3567 aa3.7□□□□□ -1.82
ITSN2-213ENST00000622089 ASPMQ8IZT6 3477 aa3.69□□□□□ -1.82
ITSN2-213ENST00000622089 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
ITSN2-213ENST00000622089 LOC400499M0QZD8 3231 aa3.66□□□□□ -1.82
ITSN2-213ENST00000622089 SPRR2GQ9BYE4 73 aa3.64□□□□□ -1.83
ITSN2-213ENST00000622089 DMDP11532 3685 aa3.64□□□□□ -1.83
ITSN2-213ENST00000622089 MT1HP80294 61 aa3.61□□□□□ -1.83
ITSN2-213ENST00000622089 LAMA5O15230 3695 aa3.61□□□□□ -1.83
ITSN2-213ENST00000622089 RELNP78509 3460 aa3.58□□□□□ -1.84
ITSN2-213ENST00000622089 MEGF8Q7Z7M0 2845 aa3.58□□□□□ -1.84
ITSN2-213ENST00000622089 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
ITSN2-213ENST00000622089 SMG1Q96Q15 3661 aaKnown RBP3.57□□□□□ -1.84
ITSN2-213ENST00000622089 PKD1L1Q8TDX9 2849 aa3.57□□□□□ -1.84
ITSN2-213ENST00000622089 MT2AP02795 61 aa3.57□□□□□ -1.84
ITSN2-213ENST00000622089 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
ITSN2-213ENST00000622089 SPENQ96T58 3664 aaKnown RBP3.56□□□□□ -1.84
ITSN2-213ENST00000622089 KRTAP19-5Q3LI72 72 aa3.55□□□□□ -1.84
ITSN2-213ENST00000622089 KRTAP4-1Q9BYQ7 146 aa3.54□□□□□ -1.84
ITSN2-213ENST00000622089 FBN3Q75N90 2809 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms