RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 NAV2Q8IVL1 2488 aa0.95□□□□□ -2.26
BRCA1-229ENST00000621897 BRCA2P51587 3418 aa0.95□□□□□ -2.26
BRCA1-229ENST00000621897 BSNQ9UPA5 3926 aa0.95□□□□□ -2.26
BRCA1-229ENST00000621897 A0A096LPF7 62 aa0.95□□□□□ -2.26
BRCA1-229ENST00000621897 SPINK1P00995 79 aa0.95□□□□□ -2.26
BRCA1-229ENST00000621897 PRLHP81277 87 aa0.95□□□□□ -2.26
BRCA1-229ENST00000621897 SPG11Q96JI7 2443 aa0.95□□□□□ -2.26
BRCA1-229ENST00000621897 WDR87Q6ZQQ6 2873 aa0.94□□□□□ -2.26
BRCA1-229ENST00000621897 PRRC2CQ9Y520 2896 aaKnown RBP0.94□□□□□ -2.26
BRCA1-229ENST00000621897 SPTAN1Q13813 2472 aaKnown RBP0.94□□□□□ -2.26
BRCA1-229ENST00000621897 MKI67P46013 3256 aaKnown RBP0.94□□□□□ -2.26
BRCA1-229ENST00000621897 SPTBN4Q9H254 2564 aa0.94□□□□□ -2.26
BRCA1-229ENST00000621897 CHD6Q8TD26 2715 aa0.94□□□□□ -2.26
BRCA1-229ENST00000621897 A0A0C4DFX4 3053 aa0.93□□□□□ -2.26
BRCA1-229ENST00000621897 UTRNP46939 3433 aa0.93□□□□□ -2.26
BRCA1-229ENST00000621897 A0A096LNI7 61 aa0.93□□□□□ -2.26
BRCA1-229ENST00000621897 TNRC18O15417 2968 aaPredicted RBP0.93□□□□□ -2.26
BRCA1-229ENST00000621897 LAMA1P25391 3075 aa0.93□□□□□ -2.26
BRCA1-229ENST00000621897 EYSQ5T1H1 3165 aa0.93□□□□□ -2.26
BRCA1-229ENST00000621897 VWFP04275 2813 aa0.93□□□□□ -2.26
BRCA1-229ENST00000621897 ANKHD1Q8IWZ3 2542 aaKnown RBP0.92□□□□□ -2.26
BRCA1-229ENST00000621897 UNC80Q8N2C7 3258 aa0.92□□□□□ -2.26
BRCA1-229ENST00000621897 PTPN13Q12923 2485 aa0.92□□□□□ -2.26
BRCA1-229ENST00000621897 TENM3Q9P273 2699 aa0.92□□□□□ -2.26
BRCA1-229ENST00000621897 ZNF469Q96JG9 3925 aaPredicted RBP0.92□□□□□ -2.26
BRCA1-229ENST00000621897 TLN1Q9Y490 2541 aaKnown RBP0.92□□□□□ -2.26
BRCA1-229ENST00000621897 HECTD1Q9ULT8 2610 aa0.92□□□□□ -2.26
BRCA1-229ENST00000621897 SZT2Q5T011 3432 aa0.92□□□□□ -2.26
BRCA1-229ENST00000621897 TENM4Q6N022 2769 aa0.91□□□□□ -2.26
BRCA1-229ENST00000621897 AKAP9Q99996 3911 aa0.91□□□□□ -2.26
BRCA1-229ENST00000621897 SPTBN5Q9NRC6 3674 aaKnown RBP0.91□□□□□ -2.26
BRCA1-229ENST00000621897 TRIOO75962 3097 aa0.91□□□□□ -2.26
BRCA1-229ENST00000621897 PKD1L2Q7Z442 2459 aa0.91□□□□□ -2.26
BRCA1-229ENST00000621897 FRYLO94915 3013 aa0.91□□□□□ -2.26
BRCA1-229ENST00000621897 H3BUX3 64 aa0.91□□□□□ -2.26
BRCA1-229ENST00000621897 U3KQA8 63 aa0.91□□□□□ -2.26
BRCA1-229ENST00000621897 SONP18583 2426 aaKnown RBP0.91□□□□□ -2.26
BRCA1-229ENST00000621897 FRAS1Q86XX4 4008 aa0.91□□□□□ -2.26
BRCA1-229ENST00000621897 CCDC168Q8NDH2 2452 aa0.91□□□□□ -2.26
BRCA1-229ENST00000621897 PRUNE2Q8WUY3 3088 aa0.9□□□□□ -2.26
BRCA1-229ENST00000621897 USP34Q70CQ2 3546 aa0.9□□□□□ -2.27
BRCA1-229ENST00000621897 HTN3P15516 51 aa0.9□□□□□ -2.27
BRCA1-229ENST00000621897 SPINK6Q6UWN8 80 aa0.9□□□□□ -2.27
BRCA1-229ENST00000621897 FAT2Q9NYQ8 4349 aa0.9□□□□□ -2.27
BRCA1-229ENST00000621897 CFAP54Q96N23 3096 aa0.9□□□□□ -2.27
BRCA1-229ENST00000621897 TLN2Q9Y4G6 2542 aa0.89□□□□□ -2.27
BRCA1-229ENST00000621897 LAMA3Q16787 3333 aa0.89□□□□□ -2.27
BRCA1-229ENST00000621897 DNAH14Q0VDD8 3507 aa0.89□□□□□ -2.27
BRCA1-229ENST00000621897 CMYA5Q8N3K9 4069 aa0.89□□□□□ -2.27
BRCA1-229ENST00000621897 USP9XQ93008 2570 aaPredicted RBP0.89□□□□□ -2.27
BRCA1-229ENST00000621897 CFAP47Q6ZTR5 3102 aa0.89□□□□□ -2.27
BRCA1-229ENST00000621897 AKAP13Q12802 2813 aa0.89□□□□□ -2.27
BRCA1-229ENST00000621897 NCOR2Q9Y618 2525 aa0.89□□□□□ -2.27
BRCA1-229ENST00000621897 SPENQ96T58 3664 aaKnown RBP0.89□□□□□ -2.27
BRCA1-229ENST00000621897 COL6A3P12111 3177 aa0.89□□□□□ -2.27
BRCA1-229ENST00000621897 VPS13AQ96RL7 3174 aa0.89□□□□□ -2.27
BRCA1-229ENST00000621897 RANBP2P49792 3224 aaKnown RBP0.89□□□□□ -2.27
BRCA1-229ENST00000621897 DMXL1Q9Y485 3027 aa0.89□□□□□ -2.27
BRCA1-229ENST00000621897 SPEGQ15772 3267 aa0.88□□□□□ -2.27
BRCA1-229ENST00000621897 MTORP42345 2549 aa0.88□□□□□ -2.27
BRCA1-229ENST00000621897 ITPR1Q14643 2758 aa0.88□□□□□ -2.27
BRCA1-229ENST00000621897 DCHS2Q6V1P9 2916 aa0.88□□□□□ -2.27
BRCA1-229ENST00000621897 FREM2Q5SZK8 3169 aa0.88□□□□□ -2.27
BRCA1-229ENST00000621897 MYO9AB2RTY4 2548 aa0.88□□□□□ -2.27
BRCA1-229ENST00000621897 LRRK2Q5S007 2527 aa0.88□□□□□ -2.27
BRCA1-229ENST00000621897 FRYQ5TBA9 3013 aa0.88□□□□□ -2.27
BRCA1-229ENST00000621897 CHD8Q9HCK8 2581 aa0.88□□□□□ -2.27
BRCA1-229ENST00000621897 HRNRQ86YZ3 2850 aaPredicted RBP0.87□□□□□ -2.27
BRCA1-229ENST00000621897 HIVEP3Q5T1R4 2406 aa0.87□□□□□ -2.27
BRCA1-229ENST00000621897 DMBT1Q9UGM3 2413 aaPredicted RBP0.87□□□□□ -2.27
BRCA1-229ENST00000621897 CDH23Q9H251 3354 aa0.87□□□□□ -2.27
BRCA1-229ENST00000621897 NOTCH1P46531 2555 aa0.87□□□□□ -2.27
BRCA1-229ENST00000621897 SMR3AQ99954 134 aa0.87□□□□□ -2.27
BRCA1-229ENST00000621897 XIRP2A4UGR9 3374 aa0.87□□□□□ -2.27
BRCA1-229ENST00000621897 VCANP13611 3396 aa0.87□□□□□ -2.27
BRCA1-229ENST00000621897 CACNA1AO00555 2505 aa0.87□□□□□ -2.27
BRCA1-229ENST00000621897 ZFYVE26Q68DK2 2539 aa0.87□□□□□ -2.27
BRCA1-229ENST00000621897 LYSTQ99698 3801 aa0.87□□□□□ -2.27
BRCA1-229ENST00000621897 MAP1AP78559 2803 aaPredicted RBP0.86□□□□□ -2.27
BRCA1-229ENST00000621897 VPS13BQ7Z7G8 4022 aa0.86□□□□□ -2.27
BRCA1-229ENST00000621897 DEFB4AO15263 64 aa0.86□□□□□ -2.27
BRCA1-229ENST00000621897 DMXL2Q8TDJ6 3036 aa0.86□□□□□ -2.27
BRCA1-229ENST00000621897 FBN2P35556 2912 aa0.86□□□□□ -2.27
BRCA1-229ENST00000621897 OTOGQ6ZRI0 2925 aa0.86□□□□□ -2.27
BRCA1-229ENST00000621897 MGAQ8IWI9 3026 aa0.86□□□□□ -2.27
BRCA1-229ENST00000621897 NBEAQ8NFP9 2946 aa0.85□□□□□ -2.27
BRCA1-229ENST00000621897 SETD2Q9BYW2 2564 aaPredicted RBP0.85□□□□□ -2.27
BRCA1-229ENST00000621897 SPART-AS1P0CW21 52 aa0.85□□□□□ -2.27
BRCA1-229ENST00000621897 WDFY3Q8IZQ1 3526 aa0.85□□□□□ -2.27
BRCA1-229ENST00000621897 SRRM2Q9UQ35 2752 aaKnown RBP0.85□□□□□ -2.27
BRCA1-229ENST00000621897 ANK3Q12955 4377 aaKnown RBP0.85□□□□□ -2.27
BRCA1-229ENST00000621897 EPG5Q9HCE0 2579 aa0.85□□□□□ -2.27
BRCA1-229ENST00000621897 ACANP16112 2415 aa0.85□□□□□ -2.27
BRCA1-229ENST00000621897 DOPEY1Q5JWR5 2465 aa0.84□□□□□ -2.27
BRCA1-229ENST00000621897 ZZEF1O43149 2961 aa0.84□□□□□ -2.27
BRCA1-229ENST00000621897 LRBAP50851 2863 aa0.84□□□□□ -2.27
BRCA1-229ENST00000621897 KALRNO60229 2985 aa0.84□□□□□ -2.27
BRCA1-229ENST00000621897 DEFB135Q30KP9 77 aa0.84□□□□□ -2.27
BRCA1-229ENST00000621897 LINC01556Q5JQF7 62 aa0.84□□□□□ -2.27
BRCA1-229ENST00000621897 DEFB124Q8NES8 71 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms