RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ADGRG4Q8IZF6 3080 aa5.89□□□□□ -1.47
CLTCL1-209ENST00000617103 ATMQ13315 3056 aa5.88□□□□□ -1.47
CLTCL1-209ENST00000617103 LRBAP50851 2863 aa5.88□□□□□ -1.47
CLTCL1-209ENST00000617103 KRTAP21-3Q3LHN1 58 aa5.87□□□□□ -1.47
CLTCL1-209ENST00000617103 C20orf166-AS1Q96NR2 134 aa5.85□□□□□ -1.47
CLTCL1-209ENST00000617103 FRYLO94915 3013 aa5.83□□□□□ -1.48
CLTCL1-209ENST00000617103 CELSR2Q9HCU4 2923 aa5.83□□□□□ -1.48
CLTCL1-209ENST00000617103 COL12A1Q99715 3063 aa5.82□□□□□ -1.48
CLTCL1-209ENST00000617103 KMT2BQ9UMN6 2715 aaPredicted RBP5.8□□□□□ -1.48
CLTCL1-209ENST00000617103 LAMA1P25391 3075 aa5.79□□□□□ -1.48
CLTCL1-209ENST00000617103 H0YAA0 97 aa5.77□□□□□ -1.49
CLTCL1-209ENST00000617103 CDH23Q9H251 3354 aa5.77□□□□□ -1.49
CLTCL1-209ENST00000617103 BOD1L1Q8NFC6 3051 aa5.76□□□□□ -1.49
CLTCL1-209ENST00000617103 TNP1P09430 55 aa5.75□□□□□ -1.49
CLTCL1-209ENST00000617103 C10orf95Q9H7T3 257 aa5.75□□□□□ -1.49
CLTCL1-209ENST00000617103 ZZEF1O43149 2961 aa5.75□□□□□ -1.49
CLTCL1-209ENST00000617103 VCANP13611 3396 aa5.74□□□□□ -1.49
CLTCL1-209ENST00000617103 DCHS2Q6V1P9 2916 aa5.73□□□□□ -1.49
CLTCL1-209ENST00000617103 PP632Q6XCG6 107 aa5.71□□□□□ -1.49
CLTCL1-209ENST00000617103 REV3LO60673 3130 aa5.71□□□□□ -1.5
CLTCL1-209ENST00000617103 ZANQ9Y493 2812 aa5.7□□□□□ -1.5
CLTCL1-209ENST00000617103 SZT2Q5T011 3432 aa5.7□□□□□ -1.5
CLTCL1-209ENST00000617103 P0C880 135 aa5.69□□□□□ -1.5
CLTCL1-209ENST00000617103 TENM4Q6N022 2769 aa5.68□□□□□ -1.5
CLTCL1-209ENST00000617103 TNRC18O15417 2968 aaPredicted RBP5.67□□□□□ -1.5
CLTCL1-209ENST00000617103 CFAP47Q6ZTR5 3102 aa5.67□□□□□ -1.5
CLTCL1-209ENST00000617103 KRTAP1-4P0C5Y4 121 aa5.66□□□□□ -1.5
CLTCL1-209ENST00000617103 COL6A3P12111 3177 aa5.65□□□□□ -1.5
CLTCL1-209ENST00000617103 DNAH14Q0VDD8 3507 aa5.64□□□□□ -1.51
CLTCL1-209ENST00000617103 TENM3Q9P273 2699 aa5.63□□□□□ -1.51
CLTCL1-209ENST00000617103 FBN2P35556 2912 aa5.58□□□□□ -1.52
CLTCL1-209ENST00000617103 NF1P21359 2839 aa5.57□□□□□ -1.52
CLTCL1-209ENST00000617103 CRYBG3Q68DQ2 2970 aa5.57□□□□□ -1.52
CLTCL1-209ENST00000617103 XP32Q5T750 250 aa5.57□□□□□ -1.52
CLTCL1-209ENST00000617103 TGP01266 2768 aa5.57□□□□□ -1.52
CLTCL1-209ENST00000617103 KRTAP13-3Q3SY46 172 aa5.56□□□□□ -1.52
CLTCL1-209ENST00000617103 EYSQ5T1H1 3165 aa5.55□□□□□ -1.52
CLTCL1-209ENST00000617103 KRTAP10-8P60410 259 aa5.55□□□□□ -1.52
CLTCL1-209ENST00000617103 HRNRQ86YZ3 2850 aaPredicted RBP5.53□□□□□ -1.52
CLTCL1-209ENST00000617103 DMXL1Q9Y485 3027 aa5.51□□□□□ -1.53
CLTCL1-209ENST00000617103 TENM1Q9UKZ4 2725 aa5.5□□□□□ -1.53
CLTCL1-209ENST00000617103 SPTBN5Q9NRC6 3674 aaKnown RBP5.45□□□□□ -1.54
CLTCL1-209ENST00000617103 TPRXLQ17RH7 258 aa5.4□□□□□ -1.54
CLTCL1-209ENST00000617103 SPEGQ15772 3267 aa5.4□□□□□ -1.54
CLTCL1-209ENST00000617103 PDZD2O15018 2839 aa5.4□□□□□ -1.55
CLTCL1-209ENST00000617103 CELSR1Q9NYQ6 3014 aa5.39□□□□□ -1.55
CLTCL1-209ENST00000617103 MXRA5Q9NR99 2828 aa5.38□□□□□ -1.55
CLTCL1-209ENST00000617103 A0A1B0GVY2 172 aa5.36□□□□□ -1.55
CLTCL1-209ENST00000617103 KRTAP12-2P59991 146 aa5.35□□□□□ -1.55
CLTCL1-209ENST00000617103 LOC400499M0QZD8 3231 aa5.34□□□□□ -1.56
CLTCL1-209ENST00000617103 USP34Q70CQ2 3546 aa5.3□□□□□ -1.56
CLTCL1-209ENST00000617103 TENM2Q9NT68 2774 aa5.3□□□□□ -1.56
CLTCL1-209ENST00000617103 MUC3AQ02505 3323 aa5.3□□□□□ -1.56
CLTCL1-209ENST00000617103 KRTAP12-1P59990 96 aa5.28□□□□□ -1.56
CLTCL1-209ENST00000617103 PKD1L1Q8TDX9 2849 aa5.27□□□□□ -1.57
CLTCL1-209ENST00000617103 MYO15AQ9UKN7 3530 aa5.26□□□□□ -1.57
CLTCL1-209ENST00000617103 KRTAP13-4Q3LI77 160 aa5.25□□□□□ -1.57
CLTCL1-209ENST00000617103 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
CLTCL1-209ENST00000617103 KRTAP10-10P60014 251 aa5.24□□□□□ -1.57
CLTCL1-209ENST00000617103 PRO2289Q9P1D8 64 aa5.21□□□□□ -1.58
CLTCL1-209ENST00000617103 VWFP04275 2813 aa5.21□□□□□ -1.58
CLTCL1-209ENST00000617103 KRTAP10-6P60371 365 aaPredicted RBP5.14□□□□□ -1.59
CLTCL1-209ENST00000617103 DCHS1Q96JQ0 3298 aa5.1□□□□□ -1.59
CLTCL1-209ENST00000617103 DMDP11532 3685 aa5.1□□□□□ -1.59
CLTCL1-209ENST00000617103 WDFY3Q8IZQ1 3526 aa5.08□□□□□ -1.6
CLTCL1-209ENST00000617103 SRRM2Q9UQ35 2752 aaKnown RBP5.07□□□□□ -1.6
CLTCL1-209ENST00000617103 FBN3Q75N90 2809 aa5.06□□□□□ -1.6
CLTCL1-209ENST00000617103 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
CLTCL1-209ENST00000617103 FBN1P35555 2871 aaKnown RBP5.05□□□□□ -1.6
CLTCL1-209ENST00000617103 RELNP78509 3460 aa5.04□□□□□ -1.6
CLTCL1-209ENST00000617103 MEGF8Q7Z7M0 2845 aa5.01□□□□□ -1.61
CLTCL1-209ENST00000617103 LAMA5O15230 3695 aa4.98□□□□□ -1.61
CLTCL1-209ENST00000617103 ASPMQ8IZT6 3477 aa4.96□□□□□ -1.61
CLTCL1-209ENST00000617103 OTOGQ6ZRI0 2925 aa4.95□□□□□ -1.62
CLTCL1-209ENST00000617103 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
CLTCL1-209ENST00000617103 INE1O15225 51 aa4.92□□□□□ -1.62
CLTCL1-209ENST00000617103 COL7A1Q02388 2944 aa4.91□□□□□ -1.62
CLTCL1-209ENST00000617103 KRTAP3-3Q9BYR6 98 aa4.9□□□□□ -1.62
CLTCL1-209ENST00000617103 ZFHX4Q86UP3 3567 aa4.9□□□□□ -1.63
CLTCL1-209ENST00000617103 CSMD1Q96PZ7 3565 aa4.9□□□□□ -1.63
CLTCL1-209ENST00000617103 NBPF19A0A087WUL8 3843 aa4.83□□□□□ -1.64
CLTCL1-209ENST00000617103 ZFHX3Q15911 3703 aa4.82□□□□□ -1.64
CLTCL1-209ENST00000617103 SMG1Q96Q15 3661 aaKnown RBP4.76□□□□□ -1.65
CLTCL1-209ENST00000617103 MT1HL1P0DM35 61 aa4.72□□□□□ -1.65
CLTCL1-209ENST00000617103 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
CLTCL1-209ENST00000617103 CUBNO60494 3623 aa4.7□□□□□ -1.66
CLTCL1-209ENST00000617103 KRTAP10-12P60413 245 aa4.68□□□□□ -1.66
CLTCL1-209ENST00000617103 SVEP1Q4LDE5 3571 aa4.65□□□□□ -1.66
CLTCL1-209ENST00000617103 BSNQ9UPA5 3926 aa4.65□□□□□ -1.67
CLTCL1-209ENST00000617103 ANK3Q12955 4377 aaKnown RBP4.65□□□□□ -1.67
CLTCL1-209ENST00000617103 KRTAP10-4P60372 401 aaPredicted RBP4.63□□□□□ -1.67
CLTCL1-209ENST00000617103 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
CLTCL1-209ENST00000617103 SPENQ96T58 3664 aaKnown RBP4.61□□□□□ -1.67
CLTCL1-209ENST00000617103 TRRAPQ9Y4A5 3859 aa4.58□□□□□ -1.68
CLTCL1-209ENST00000617103 LCE3AQ5TA76 89 aa4.56□□□□□ -1.68
CLTCL1-209ENST00000617103 CSMD2Q7Z408 3487 aa4.54□□□□□ -1.68
CLTCL1-209ENST00000617103 LORP23490 312 aaPredicted RBP4.54□□□□□ -1.68
CLTCL1-209ENST00000617103 KRTAP4-5Q9BYR2 181 aa4.48□□□□□ -1.69
CLTCL1-209ENST00000617103 CRCT1Q9UGL9 99 aa4.47□□□□□ -1.69
CLTCL1-209ENST00000617103 HUWE1Q7Z6Z7 4374 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms