RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 C10orf95Q9H7T3 257 aa5.46□□□□□ -1.54
SHTN1-207ENST00000615301 KRTAP13-1Q8IUC0 172 aa5.45□□□□□ -1.54
SHTN1-207ENST00000615301 BOD1L1Q8NFC6 3051 aa5.45□□□□□ -1.54
SHTN1-207ENST00000615301 VCANP13611 3396 aa5.45□□□□□ -1.54
SHTN1-207ENST00000615301 CFAP47Q6ZTR5 3102 aa5.44□□□□□ -1.54
SHTN1-207ENST00000615301 LRBAP50851 2863 aa5.44□□□□□ -1.54
SHTN1-207ENST00000615301 COL12A1Q99715 3063 aa5.44□□□□□ -1.54
SHTN1-207ENST00000615301 ITPR2Q14571 2701 aa5.44□□□□□ -1.54
SHTN1-207ENST00000615301 ADGRG4Q8IZF6 3080 aa5.42□□□□□ -1.54
SHTN1-207ENST00000615301 CELSR2Q9HCU4 2923 aa5.4□□□□□ -1.54
SHTN1-207ENST00000615301 FLNCQ14315 2725 aa5.39□□□□□ -1.55
SHTN1-207ENST00000615301 CRYBG3Q68DQ2 2970 aa5.39□□□□□ -1.55
SHTN1-207ENST00000615301 DNAH14Q0VDD8 3507 aa5.39□□□□□ -1.55
SHTN1-207ENST00000615301 RPS29P62273 56 aaKnown RBP5.37□□□□□ -1.55
SHTN1-207ENST00000615301 TNRC18O15417 2968 aaPredicted RBP5.37□□□□□ -1.55
SHTN1-207ENST00000615301 SZT2Q5T011 3432 aa5.37□□□□□ -1.55
SHTN1-207ENST00000615301 COL6A3P12111 3177 aa5.36□□□□□ -1.55
SHTN1-207ENST00000615301 TNP1P09430 55 aa5.36□□□□□ -1.55
SHTN1-207ENST00000615301 FRYLO94915 3013 aa5.35□□□□□ -1.55
SHTN1-207ENST00000615301 ZZEF1O43149 2961 aa5.34□□□□□ -1.55
SHTN1-207ENST00000615301 TENM4Q6N022 2769 aa5.34□□□□□ -1.56
SHTN1-207ENST00000615301 DCHS2Q6V1P9 2916 aa5.3□□□□□ -1.56
SHTN1-207ENST00000615301 H0YAA0 97 aa5.3□□□□□ -1.56
SHTN1-207ENST00000615301 NIPBLQ6KC79 2804 aaeCLIP5.29□□□□□ -1.56
SHTN1-207ENST00000615301 A0A1B0GVY2 172 aa5.26□□□□□ -1.57
SHTN1-207ENST00000615301 KRTAP10-8P60410 259 aa5.26□□□□□ -1.57
SHTN1-207ENST00000615301 TENM3Q9P273 2699 aa5.24□□□□□ -1.57
SHTN1-207ENST00000615301 SPEGQ15772 3267 aa5.21□□□□□ -1.57
SHTN1-207ENST00000615301 P0C880 135 aa5.21□□□□□ -1.57
SHTN1-207ENST00000615301 ZANQ9Y493 2812 aa5.2□□□□□ -1.58
SHTN1-207ENST00000615301 KRTAP1-4P0C5Y4 121 aa5.19□□□□□ -1.58
SHTN1-207ENST00000615301 XP32Q5T750 250 aa5.18□□□□□ -1.58
SHTN1-207ENST00000615301 NF1P21359 2839 aa5.17□□□□□ -1.58
SHTN1-207ENST00000615301 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
SHTN1-207ENST00000615301 EYSQ5T1H1 3165 aa5.14□□□□□ -1.59
SHTN1-207ENST00000615301 FBN2P35556 2912 aa5.12□□□□□ -1.59
SHTN1-207ENST00000615301 TENM1Q9UKZ4 2725 aa5.11□□□□□ -1.59
SHTN1-207ENST00000615301 TGP01266 2768 aa5.11□□□□□ -1.59
SHTN1-207ENST00000615301 MYO15AQ9UKN7 3530 aa5.09□□□□□ -1.59
SHTN1-207ENST00000615301 DMXL1Q9Y485 3027 aa5.08□□□□□ -1.6
SHTN1-207ENST00000615301 SPTBN5Q9NRC6 3674 aaKnown RBP5.05□□□□□ -1.6
SHTN1-207ENST00000615301 KRTAP10-10P60014 251 aa5.03□□□□□ -1.6
SHTN1-207ENST00000615301 TENM2Q9NT68 2774 aa5.02□□□□□ -1.61
SHTN1-207ENST00000615301 PKD1L1Q8TDX9 2849 aa5.02□□□□□ -1.61
SHTN1-207ENST00000615301 CELSR1Q9NYQ6 3014 aa4.99□□□□□ -1.61
SHTN1-207ENST00000615301 KRTAP12-2P59991 146 aa4.98□□□□□ -1.61
SHTN1-207ENST00000615301 HRNRQ86YZ3 2850 aaPredicted RBP4.98□□□□□ -1.61
SHTN1-207ENST00000615301 VWFP04275 2813 aa4.97□□□□□ -1.61
SHTN1-207ENST00000615301 USP34Q70CQ2 3546 aa4.97□□□□□ -1.61
SHTN1-207ENST00000615301 PDZD2O15018 2839 aa4.97□□□□□ -1.61
SHTN1-207ENST00000615301 LOC400499M0QZD8 3231 aa4.97□□□□□ -1.61
SHTN1-207ENST00000615301 KRTAP13-3Q3SY46 172 aa4.95□□□□□ -1.62
SHTN1-207ENST00000615301 TPRXLQ17RH7 258 aa4.94□□□□□ -1.62
SHTN1-207ENST00000615301 MUC3AQ02505 3323 aa4.94□□□□□ -1.62
SHTN1-207ENST00000615301 WDFY3Q8IZQ1 3526 aa4.87□□□□□ -1.63
SHTN1-207ENST00000615301 SRRM2Q9UQ35 2752 aaKnown RBP4.87□□□□□ -1.63
SHTN1-207ENST00000615301 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
SHTN1-207ENST00000615301 DCHS1Q96JQ0 3298 aa4.85□□□□□ -1.63
SHTN1-207ENST00000615301 MXRA5Q9NR99 2828 aa4.84□□□□□ -1.64
SHTN1-207ENST00000615301 KRTAP12-1P59990 96 aa4.83□□□□□ -1.64
SHTN1-207ENST00000615301 RELNP78509 3460 aa4.82□□□□□ -1.64
SHTN1-207ENST00000615301 KRTAP13-4Q3LI77 160 aa4.79□□□□□ -1.64
SHTN1-207ENST00000615301 KRTAP3-1Q9BYR8 98 aa4.79□□□□□ -1.64
SHTN1-207ENST00000615301 ASPMQ8IZT6 3477 aa4.77□□□□□ -1.65
SHTN1-207ENST00000615301 KRTAP21-3Q3LHN1 58 aa4.75□□□□□ -1.65
SHTN1-207ENST00000615301 ZFHX4Q86UP3 3567 aa4.74□□□□□ -1.65
SHTN1-207ENST00000615301 FBN1P35555 2871 aaKnown RBP4.72□□□□□ -1.65
SHTN1-207ENST00000615301 CSMD1Q96PZ7 3565 aa4.68□□□□□ -1.66
SHTN1-207ENST00000615301 DMDP11532 3685 aa4.67□□□□□ -1.66
SHTN1-207ENST00000615301 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
SHTN1-207ENST00000615301 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
SHTN1-207ENST00000615301 CUBNO60494 3623 aa4.64□□□□□ -1.67
SHTN1-207ENST00000615301 FBN3Q75N90 2809 aa4.64□□□□□ -1.67
SHTN1-207ENST00000615301 LAMA5O15230 3695 aa4.62□□□□□ -1.67
SHTN1-207ENST00000615301 MEGF8Q7Z7M0 2845 aa4.59□□□□□ -1.67
SHTN1-207ENST00000615301 COL7A1Q02388 2944 aa4.55□□□□□ -1.68
SHTN1-207ENST00000615301 CRCT1Q9UGL9 99 aa4.51□□□□□ -1.69
SHTN1-207ENST00000615301 NBPF19A0A087WUL8 3843 aa4.51□□□□□ -1.69
SHTN1-207ENST00000615301 ZFHX3Q15911 3703 aa4.51□□□□□ -1.69
SHTN1-207ENST00000615301 SVEP1Q4LDE5 3571 aa4.5□□□□□ -1.69
SHTN1-207ENST00000615301 SMG1Q96Q15 3661 aaKnown RBP4.5□□□□□ -1.69
SHTN1-207ENST00000615301 KRTAP3-2Q9BYR7 98 aa4.47□□□□□ -1.69
SHTN1-207ENST00000615301 OTOGQ6ZRI0 2925 aa4.46□□□□□ -1.7
SHTN1-207ENST00000615301 KRTAP3-3Q9BYR6 98 aa4.44□□□□□ -1.7
SHTN1-207ENST00000615301 CSMD2Q7Z408 3487 aa4.42□□□□□ -1.7
SHTN1-207ENST00000615301 INE1O15225 51 aa4.39□□□□□ -1.71
SHTN1-207ENST00000615301 KRTAP10-12P60413 245 aa4.37□□□□□ -1.71
SHTN1-207ENST00000615301 MT1HL1P0DM35 61 aa4.34□□□□□ -1.72
SHTN1-207ENST00000615301 SPENQ96T58 3664 aaKnown RBP4.33□□□□□ -1.72
SHTN1-207ENST00000615301 TRRAPQ9Y4A5 3859 aa4.3□□□□□ -1.72
SHTN1-207ENST00000615301 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
SHTN1-207ENST00000615301 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
SHTN1-207ENST00000615301 LORP23490 312 aaPredicted RBP4.28□□□□□ -1.72
SHTN1-207ENST00000615301 ANK3Q12955 4377 aaKnown RBP4.25□□□□□ -1.73
SHTN1-207ENST00000615301 BSNQ9UPA5 3926 aa4.24□□□□□ -1.73
SHTN1-207ENST00000615301 KRTAP4-5Q9BYR2 181 aa4.24□□□□□ -1.73
SHTN1-207ENST00000615301 KRTAP10-4P60372 401 aaPredicted RBP4.17□□□□□ -1.74
SHTN1-207ENST00000615301 CSMD3Q7Z407 3707 aa4.16□□□□□ -1.74
SHTN1-207ENST00000615301 KRTAP10-5P60370 271 aa4.15□□□□□ -1.74
SHTN1-207ENST00000615301 HUWE1Q7Z6Z7 4374 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms