RNA–Protein interactions for RNA: ENST00000615287.4

CHRNA4-207, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA4, Length 5,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-207ENST00000615287 VCANP13611 3396 aa10.28□□□□□ -0.76
CHRNA4-207ENST00000615287 BOD1L1Q8NFC6 3051 aa10.27□□□□□ -0.77
CHRNA4-207ENST00000615287 ADGRG4Q8IZF6 3080 aa10.26□□□□□ -0.77
CHRNA4-207ENST00000615287 COL6A3P12111 3177 aa10.26□□□□□ -0.77
CHRNA4-207ENST00000615287 C20orf166-AS1Q96NR2 134 aa10.25□□□□□ -0.77
CHRNA4-207ENST00000615287 NIPBLQ6KC79 2804 aaeCLIP10.23□□□□□ -0.77
CHRNA4-207ENST00000615287 PRAC1Q96KF2 57 aa10.22□□□□□ -0.77
CHRNA4-207ENST00000615287 A8MUU9 505 aa10.21□□□□□ -0.78
CHRNA4-207ENST00000615287 NBEAQ8NFP9 2946 aa10.19□□□□□ -0.78
CHRNA4-207ENST00000615287 ZZEF1O43149 2961 aa10.17□□□□□ -0.78
CHRNA4-207ENST00000615287 FREM2Q5SZK8 3169 aa10.14□□□□□ -0.79
CHRNA4-207ENST00000615287 DNAH14Q0VDD8 3507 aa10.09□□□□□ -0.79
CHRNA4-207ENST00000615287 CELSR2Q9HCU4 2923 aa10.08□□□□□ -0.8
CHRNA4-207ENST00000615287 ASH1LQ9NR48 2969 aaKnown RBP10.06□□□□□ -0.8
CHRNA4-207ENST00000615287 KRTAP1-4P0C5Y4 121 aa10.05□□□□□ -0.8
CHRNA4-207ENST00000615287 DCHS2Q6V1P9 2916 aa10□□□□□ -0.81
CHRNA4-207ENST00000615287 DMXL1Q9Y485 3027 aa10□□□□□ -0.81
CHRNA4-207ENST00000615287 ZANQ9Y493 2812 aa9.98□□□□□ -0.81
CHRNA4-207ENST00000615287 CFAP47Q6ZTR5 3102 aa9.97□□□□□ -0.81
CHRNA4-207ENST00000615287 SPTBN5Q9NRC6 3674 aaKnown RBP9.97□□□□□ -0.81
CHRNA4-207ENST00000615287 XP32Q5T750 250 aa9.97□□□□□ -0.81
CHRNA4-207ENST00000615287 USP34Q70CQ2 3546 aa9.96□□□□□ -0.81
CHRNA4-207ENST00000615287 A8MU10 97 aa9.95□□□□□ -0.82
CHRNA4-207ENST00000615287 H3BS24 57 aa9.93□□□□□ -0.82
CHRNA4-207ENST00000615287 TPRXLQ17RH7 258 aa9.88□□□□□ -0.83
CHRNA4-207ENST00000615287 A0A0A0MQY5 61 aa9.86□□□□□ -0.83
CHRNA4-207ENST00000615287 HRNRQ86YZ3 2850 aaPredicted RBP9.85□□□□□ -0.83
CHRNA4-207ENST00000615287 NF1P21359 2839 aa9.82□□□□□ -0.84
CHRNA4-207ENST00000615287 SPEGQ15772 3267 aa9.78□□□□□ -0.84
CHRNA4-207ENST00000615287 A0A1B0GVY2 172 aa9.76□□□□□ -0.85
CHRNA4-207ENST00000615287 TNP1P09430 55 aa9.76□□□□□ -0.85
CHRNA4-207ENST00000615287 TENM2Q9NT68 2774 aa9.76□□□□□ -0.85
CHRNA4-207ENST00000615287 TENM1Q9UKZ4 2725 aa9.73□□□□□ -0.85
CHRNA4-207ENST00000615287 TENM3Q9P273 2699 aa9.68□□□□□ -0.86
CHRNA4-207ENST00000615287 KRTAP13-3Q3SY46 172 aa9.67□□□□□ -0.86
CHRNA4-207ENST00000615287 FBN2P35556 2912 aa9.67□□□□□ -0.86
CHRNA4-207ENST00000615287 KRTAP10-8P60410 259 aa9.62□□□□□ -0.87
CHRNA4-207ENST00000615287 KRTAP25-1Q3LHN0 102 aa9.62□□□□□ -0.87
CHRNA4-207ENST00000615287 MXRA5Q9NR99 2828 aa9.62□□□□□ -0.87
CHRNA4-207ENST00000615287 KRTAP10-10P60014 251 aa9.61□□□□□ -0.87
CHRNA4-207ENST00000615287 LOC400499M0QZD8 3231 aa9.6□□□□□ -0.87
CHRNA4-207ENST00000615287 KRTAP16-1A8MUX0 517 aa9.58□□□□□ -0.88
CHRNA4-207ENST00000615287 A6NN06 94 aa9.56□□□□□ -0.88
CHRNA4-207ENST00000615287 CELSR1Q9NYQ6 3014 aa9.51□□□□□ -0.89
CHRNA4-207ENST00000615287 PKD1L1Q8TDX9 2849 aa9.41□□□□□ -0.9
CHRNA4-207ENST00000615287 PRO2289Q9P1D8 64 aa9.41□□□□□ -0.9
CHRNA4-207ENST00000615287 PDZD2O15018 2839 aa9.4□□□□□ -0.91
CHRNA4-207ENST00000615287 PP632Q6XCG6 107 aa9.37□□□□□ -0.91
CHRNA4-207ENST00000615287 C10orf95Q9H7T3 257 aa9.35□□□□□ -0.91
CHRNA4-207ENST00000615287 MYO15AQ9UKN7 3530 aa9.33□□□□□ -0.92
CHRNA4-207ENST00000615287 DCHS1Q96JQ0 3298 aa9.31□□□□□ -0.92
CHRNA4-207ENST00000615287 RELNP78509 3460 aa9.3□□□□□ -0.92
CHRNA4-207ENST00000615287 H0YAA0 97 aa9.26□□□□□ -0.93
CHRNA4-207ENST00000615287 P0C880 135 aa9.26□□□□□ -0.93
CHRNA4-207ENST00000615287 VWFP04275 2813 aa9.21□□□□□ -0.93
CHRNA4-207ENST00000615287 WDFY3Q8IZQ1 3526 aa9.19□□□□□ -0.94
CHRNA4-207ENST00000615287 OTOGQ6ZRI0 2925 aa9.19□□□□□ -0.94
CHRNA4-207ENST00000615287 TGP01266 2768 aa9.18□□□□□ -0.94
CHRNA4-207ENST00000615287 NBPF19A0A087WUL8 3843 aa9.17□□□□□ -0.94
CHRNA4-207ENST00000615287 NDUFAF8A1L188 74 aa9.12□□□□□ -0.95
CHRNA4-207ENST00000615287 ASPMQ8IZT6 3477 aa9.02□□□□□ -0.97
CHRNA4-207ENST00000615287 FBN1P35555 2871 aaKnown RBP9□□□□□ -0.97
CHRNA4-207ENST00000615287 LAMA5O15230 3695 aa8.98□□□□□ -0.97
CHRNA4-207ENST00000615287 ZFHX3Q15911 3703 aa8.95□□□□□ -0.98
CHRNA4-207ENST00000615287 ANK3Q12955 4377 aaKnown RBP8.94□□□□□ -0.98
CHRNA4-207ENST00000615287 MT1HL1P0DM35 61 aa8.81□□□□□ -1
CHRNA4-207ENST00000615287 KRTAP12-2P59991 146 aa8.81□□□□□ -1
CHRNA4-207ENST00000615287 ZFHX4Q86UP3 3567 aa8.81□□□□□ -1
CHRNA4-207ENST00000615287 KRTAP3-1Q9BYR8 98 aa8.77□□□□□ -1.01
CHRNA4-207ENST00000615287 SRRM2Q9UQ35 2752 aaKnown RBP8.75□□□□□ -1.01
CHRNA4-207ENST00000615287 KRTAP13-4Q3LI77 160 aa8.71□□□□□ -1.01
CHRNA4-207ENST00000615287 DMDP11532 3685 aa8.7□□□□□ -1.02
CHRNA4-207ENST00000615287 KRTAP12-1P59990 96 aa8.67□□□□□ -1.02
CHRNA4-207ENST00000615287 KRTAP4-5Q9BYR2 181 aa8.64□□□□□ -1.03
CHRNA4-207ENST00000615287 FBN3Q75N90 2809 aa8.64□□□□□ -1.03
CHRNA4-207ENST00000615287 MUC3AQ02505 3323 aa8.64□□□□□ -1.03
CHRNA4-207ENST00000615287 CSMD1Q96PZ7 3565 aa8.56□□□□□ -1.04
CHRNA4-207ENST00000615287 CSMD2Q7Z408 3487 aa8.56□□□□□ -1.04
CHRNA4-207ENST00000615287 KRTAP10-4P60372 401 aaPredicted RBP8.55□□□□□ -1.04
CHRNA4-207ENST00000615287 SMG1Q96Q15 3661 aaKnown RBP8.54□□□□□ -1.04
CHRNA4-207ENST00000615287 MEGF8Q7Z7M0 2845 aa8.51□□□□□ -1.05
CHRNA4-207ENST00000615287 TRRAPQ9Y4A5 3859 aa8.5□□□□□ -1.05
CHRNA4-207ENST00000615287 KRTAP10-6P60371 365 aaPredicted RBP8.45□□□□□ -1.06
CHRNA4-207ENST00000615287 COL7A1Q02388 2944 aa8.43□□□□□ -1.06
CHRNA4-207ENST00000615287 HUWE1Q7Z6Z7 4374 aaKnown RBP8.41□□□□□ -1.06
CHRNA4-207ENST00000615287 KRTAP15-1Q3LI76 137 aa8.39□□□□□ -1.07
CHRNA4-207ENST00000615287 SPENQ96T58 3664 aaKnown RBP8.34□□□□□ -1.07
CHRNA4-207ENST00000615287 ALMS1Q8TCU4 4167 aa8.33□□□□□ -1.08
CHRNA4-207ENST00000615287 SVEP1Q4LDE5 3571 aa8.31□□□□□ -1.08
CHRNA4-207ENST00000615287 KRTAP3-3Q9BYR6 98 aa8.22□□□□□ -1.09
CHRNA4-207ENST00000615287 BSNQ9UPA5 3926 aa8.2□□□□□ -1.1
CHRNA4-207ENST00000615287 KRTAP10-12P60413 245 aa8.17□□□□□ -1.1
CHRNA4-207ENST00000615287 KRTAP3-2Q9BYR7 98 aa8.17□□□□□ -1.1
CHRNA4-207ENST00000615287 CUBNO60494 3623 aa8.14□□□□□ -1.11
CHRNA4-207ENST00000615287 DNAH9Q9NYC9 4486 aa8.02□□□□□ -1.13
CHRNA4-207ENST00000615287 CRCT1Q9UGL9 99 aa7.98□□□□□ -1.13
CHRNA4-207ENST00000615287 DNAH5Q8TE73 4624 aa7.93□□□□□ -1.14
CHRNA4-207ENST00000615287 KRTAP12-3P60328 96 aa7.87□□□□□ -1.15
CHRNA4-207ENST00000615287 VPS13CQ709C8 3753 aa7.87□□□□□ -1.15
CHRNA4-207ENST00000615287 LORP23490 312 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms