RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SPTBN5Q9NRC6 3674 aaKnown RBP4.83□□□□□ -1.64
TNFRSF9-204ENST00000615230 A6NN06 94 aa4.83□□□□□ -1.64
TNFRSF9-204ENST00000615230 LAMA1P25391 3075 aa4.8□□□□□ -1.64
TNFRSF9-204ENST00000615230 SZT2Q5T011 3432 aa4.79□□□□□ -1.64
TNFRSF9-204ENST00000615230 MKI67P46013 3256 aaKnown RBP4.79□□□□□ -1.64
TNFRSF9-204ENST00000615230 MUC3AQ02505 3323 aa4.79□□□□□ -1.64
TNFRSF9-204ENST00000615230 MT1HL1P0DM35 61 aa4.75□□□□□ -1.65
TNFRSF9-204ENST00000615230 REV3LO60673 3130 aa4.75□□□□□ -1.65
TNFRSF9-204ENST00000615230 FLNCQ14315 2725 aa4.75□□□□□ -1.65
TNFRSF9-204ENST00000615230 ANK3Q12955 4377 aaKnown RBP4.75□□□□□ -1.65
TNFRSF9-204ENST00000615230 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
TNFRSF9-204ENST00000615230 HUWE1Q7Z6Z7 4374 aaKnown RBP4.74□□□□□ -1.65
TNFRSF9-204ENST00000615230 DMBT1Q9UGM3 2413 aaPredicted RBP4.73□□□□□ -1.65
TNFRSF9-204ENST00000615230 PRUNE2Q8WUY3 3088 aa4.72□□□□□ -1.65
TNFRSF9-204ENST00000615230 DMDP11532 3685 aa4.71□□□□□ -1.66
TNFRSF9-204ENST00000615230 CFAP54Q96N23 3096 aa4.71□□□□□ -1.66
TNFRSF9-204ENST00000615230 PDZD2O15018 2839 aa4.71□□□□□ -1.66
TNFRSF9-204ENST00000615230 SPEGQ15772 3267 aa4.71□□□□□ -1.66
TNFRSF9-204ENST00000615230 LRBAP50851 2863 aa4.7□□□□□ -1.66
TNFRSF9-204ENST00000615230 P0C880 135 aa4.7□□□□□ -1.66
TNFRSF9-204ENST00000615230 NBEAL2Q6ZNJ1 2754 aa4.68□□□□□ -1.66
TNFRSF9-204ENST00000615230 SPENQ96T58 3664 aaKnown RBP4.68□□□□□ -1.66
TNFRSF9-204ENST00000615230 STAB2Q8WWQ8 2551 aa4.67□□□□□ -1.66
TNFRSF9-204ENST00000615230 NIPBLQ6KC79 2804 aaeCLIP4.66□□□□□ -1.66
TNFRSF9-204ENST00000615230 WDFY4Q6ZS81 3184 aa4.65□□□□□ -1.67
TNFRSF9-204ENST00000615230 KRTAP10-4P60372 401 aaPredicted RBP4.64□□□□□ -1.67
TNFRSF9-204ENST00000615230 HRNRQ86YZ3 2850 aaPredicted RBP4.64□□□□□ -1.67
TNFRSF9-204ENST00000615230 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
TNFRSF9-204ENST00000615230 ASH1LQ9NR48 2969 aaKnown RBP4.59□□□□□ -1.67
TNFRSF9-204ENST00000615230 ATMQ13315 3056 aa4.59□□□□□ -1.68
TNFRSF9-204ENST00000615230 DMXL2Q8TDJ6 3036 aa4.57□□□□□ -1.68
TNFRSF9-204ENST00000615230 FLG2Q5D862 2391 aaPredicted RBP4.57□□□□□ -1.68
TNFRSF9-204ENST00000615230 COL12A1Q99715 3063 aa4.56□□□□□ -1.68
TNFRSF9-204ENST00000615230 ZFHX4Q86UP3 3567 aa4.56□□□□□ -1.68
TNFRSF9-204ENST00000615230 FRYQ5TBA9 3013 aa4.55□□□□□ -1.68
TNFRSF9-204ENST00000615230 TENM2Q9NT68 2774 aa4.55□□□□□ -1.68
TNFRSF9-204ENST00000615230 NBEAQ8NFP9 2946 aa4.54□□□□□ -1.68
TNFRSF9-204ENST00000615230 COL6A3P12111 3177 aa4.54□□□□□ -1.68
TNFRSF9-204ENST00000615230 TRIOO75962 3097 aa4.54□□□□□ -1.68
TNFRSF9-204ENST00000615230 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
TNFRSF9-204ENST00000615230 FBN2P35556 2912 aa4.52□□□□□ -1.69
TNFRSF9-204ENST00000615230 KRTAP3-1Q9BYR8 98 aa4.5□□□□□ -1.69
TNFRSF9-204ENST00000615230 FRYLO94915 3013 aa4.5□□□□□ -1.69
TNFRSF9-204ENST00000615230 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
TNFRSF9-204ENST00000615230 KRTAP12-1P59990 96 aa4.48□□□□□ -1.69
TNFRSF9-204ENST00000615230 A0A0C4DFX4 3053 aa4.48□□□□□ -1.69
TNFRSF9-204ENST00000615230 CRYBG3Q68DQ2 2970 aa4.47□□□□□ -1.69
TNFRSF9-204ENST00000615230 LOC400499M0QZD8 3231 aa4.47□□□□□ -1.69
TNFRSF9-204ENST00000615230 DMXL1Q9Y485 3027 aa4.45□□□□□ -1.7
TNFRSF9-204ENST00000615230 H3BS24 57 aa4.45□□□□□ -1.7
TNFRSF9-204ENST00000615230 MXRA5Q9NR99 2828 aa4.45□□□□□ -1.7
TNFRSF9-204ENST00000615230 ASPMQ8IZT6 3477 aa4.44□□□□□ -1.7
TNFRSF9-204ENST00000615230 RELNP78509 3460 aa4.44□□□□□ -1.7
TNFRSF9-204ENST00000615230 OTOGQ6ZRI0 2925 aa4.42□□□□□ -1.7
TNFRSF9-204ENST00000615230 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
TNFRSF9-204ENST00000615230 VPS13AQ96RL7 3174 aa4.42□□□□□ -1.7
TNFRSF9-204ENST00000615230 DNAH1Q9P2D7 4330 aa4.42□□□□□ -1.7
TNFRSF9-204ENST00000615230 SMG1Q96Q15 3661 aaKnown RBP4.41□□□□□ -1.7
TNFRSF9-204ENST00000615230 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
TNFRSF9-204ENST00000615230 KALRNO60229 2985 aa4.4□□□□□ -1.71
TNFRSF9-204ENST00000615230 ZZEF1O43149 2961 aa4.39□□□□□ -1.71
TNFRSF9-204ENST00000615230 TACC2O95359 2948 aa4.39□□□□□ -1.71
TNFRSF9-204ENST00000615230 NF1P21359 2839 aa4.37□□□□□ -1.71
TNFRSF9-204ENST00000615230 CELSR2Q9HCU4 2923 aa4.37□□□□□ -1.71
TNFRSF9-204ENST00000615230 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
TNFRSF9-204ENST00000615230 ADGRG4Q8IZF6 3080 aa4.36□□□□□ -1.71
TNFRSF9-204ENST00000615230 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
TNFRSF9-204ENST00000615230 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
TNFRSF9-204ENST00000615230 DNAH2Q9P225 4427 aa4.34□□□□□ -1.71
TNFRSF9-204ENST00000615230 TENM1Q9UKZ4 2725 aa4.33□□□□□ -1.72
TNFRSF9-204ENST00000615230 DCHS2Q6V1P9 2916 aa4.32□□□□□ -1.72
TNFRSF9-204ENST00000615230 DNAH10Q8IVF4 4471 aa4.31□□□□□ -1.72
TNFRSF9-204ENST00000615230 CELSR3Q9NYQ7 3312 aa4.31□□□□□ -1.72
TNFRSF9-204ENST00000615230 ZANQ9Y493 2812 aa4.3□□□□□ -1.72
TNFRSF9-204ENST00000615230 NBPF19A0A087WUL8 3843 aa4.29□□□□□ -1.72
TNFRSF9-204ENST00000615230 CSMD2Q7Z408 3487 aa4.29□□□□□ -1.72
TNFRSF9-204ENST00000615230 BOD1L1Q8NFC6 3051 aa4.29□□□□□ -1.72
TNFRSF9-204ENST00000615230 CSMD1Q96PZ7 3565 aa4.29□□□□□ -1.72
TNFRSF9-204ENST00000615230 DNAH9Q9NYC9 4486 aa4.29□□□□□ -1.72
TNFRSF9-204ENST00000615230 TENM3Q9P273 2699 aa4.27□□□□□ -1.73
TNFRSF9-204ENST00000615230 KRTAP3-3Q9BYR6 98 aa4.26□□□□□ -1.73
TNFRSF9-204ENST00000615230 CELSR1Q9NYQ6 3014 aa4.26□□□□□ -1.73
TNFRSF9-204ENST00000615230 CFAP47Q6ZTR5 3102 aa4.26□□□□□ -1.73
TNFRSF9-204ENST00000615230 DNAH6Q9C0G6 4158 aa4.25□□□□□ -1.73
TNFRSF9-204ENST00000615230 DNAH11Q96DT5 4516 aa4.25□□□□□ -1.73
TNFRSF9-204ENST00000615230 FBN1P35555 2871 aaKnown RBP4.25□□□□□ -1.73
TNFRSF9-204ENST00000615230 SVEP1Q4LDE5 3571 aa4.24□□□□□ -1.73
TNFRSF9-204ENST00000615230 FREM2Q5SZK8 3169 aa4.22□□□□□ -1.73
TNFRSF9-204ENST00000615230 FBN3Q75N90 2809 aa4.22□□□□□ -1.73
TNFRSF9-204ENST00000615230 KRTAP3-2Q9BYR7 98 aa4.22□□□□□ -1.73
TNFRSF9-204ENST00000615230 MT1HP80294 61 aa4.2□□□□□ -1.74
TNFRSF9-204ENST00000615230 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
TNFRSF9-204ENST00000615230 DYNC1H1Q14204 4646 aaKnown RBP4.17□□□□□ -1.74
TNFRSF9-204ENST00000615230 DCHS1Q96JQ0 3298 aa4.17□□□□□ -1.74
TNFRSF9-204ENST00000615230 LAMA5O15230 3695 aa4.16□□□□□ -1.74
TNFRSF9-204ENST00000615230 VWFP04275 2813 aa4.15□□□□□ -1.75
TNFRSF9-204ENST00000615230 KRTAP12-3P60328 96 aa4.14□□□□□ -1.75
TNFRSF9-204ENST00000615230 TGP01266 2768 aa4.13□□□□□ -1.75
TNFRSF9-204ENST00000615230 PKD1L1Q8TDX9 2849 aa4.12□□□□□ -1.75
TNFRSF9-204ENST00000615230 DNAH3Q8TD57 4116 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms