RNA–Protein interactions for RNA: ENST00000613302.4

RUNX1T1-248, Transcript of RUNX1 translocation partner 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RUNX1T1, Length 7,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-248ENST00000613302 LINC01558Q9Y6Z2 57 aa5.08□□□□□ -1.6
RUNX1T1-248ENST00000613302 UBR5O95071 2799 aaPredicted RBP5.07□□□□□ -1.6
RUNX1T1-248ENST00000613302 TNP1P09430 55 aa5.07□□□□□ -1.6
RUNX1T1-248ENST00000613302 FLNCQ14315 2725 aa5.06□□□□□ -1.6
RUNX1T1-248ENST00000613302 NBPF19A0A087WUL8 3843 aa5.06□□□□□ -1.6
RUNX1T1-248ENST00000613302 APCP25054 2843 aa5.06□□□□□ -1.6
RUNX1T1-248ENST00000613302 COL12A1Q99715 3063 aa5.05□□□□□ -1.6
RUNX1T1-248ENST00000613302 KRTAP13-2Q52LG2 175 aa5.05□□□□□ -1.6
RUNX1T1-248ENST00000613302 HIVEP1P15822 2718 aa5.04□□□□□ -1.6
RUNX1T1-248ENST00000613302 UTP20O75691 2785 aaKnown RBP5.04□□□□□ -1.6
RUNX1T1-248ENST00000613302 ZZEF1O43149 2961 aa5.03□□□□□ -1.6
RUNX1T1-248ENST00000613302 ADGRG4Q8IZF6 3080 aa5.02□□□□□ -1.61
RUNX1T1-248ENST00000613302 Q5VV11 94 aa5.01□□□□□ -1.61
RUNX1T1-248ENST00000613302 CHD9Q3L8U1 2897 aa5.01□□□□□ -1.61
RUNX1T1-248ENST00000613302 Q6ZRN7 208 aaPredicted RBP5.01□□□□□ -1.61
RUNX1T1-248ENST00000613302 P0C880 135 aa4.99□□□□□ -1.61
RUNX1T1-248ENST00000613302 WDFY3Q8IZQ1 3526 aa4.98□□□□□ -1.61
RUNX1T1-248ENST00000613302 CYSTM1Q9H1C7 97 aa4.98□□□□□ -1.61
RUNX1T1-248ENST00000613302 LOC400499M0QZD8 3231 aa4.97□□□□□ -1.61
RUNX1T1-248ENST00000613302 TNRC18O15417 2968 aaPredicted RBP4.96□□□□□ -1.62
RUNX1T1-248ENST00000613302 KRTAP21-3Q3LHN1 58 aa4.96□□□□□ -1.62
RUNX1T1-248ENST00000613302 TENM4Q6N022 2769 aa4.95□□□□□ -1.62
RUNX1T1-248ENST00000613302 Q5XG85 94 aa4.94□□□□□ -1.62
RUNX1T1-248ENST00000613302 ZFHX4Q86UP3 3567 aa4.93□□□□□ -1.62
RUNX1T1-248ENST00000613302 ITPR1Q14643 2758 aa4.92□□□□□ -1.62
RUNX1T1-248ENST00000613302 XP32Q5T750 250 aa4.91□□□□□ -1.62
RUNX1T1-248ENST00000613302 PRO2289Q9P1D8 64 aa4.91□□□□□ -1.62
RUNX1T1-248ENST00000613302 TENM1Q9UKZ4 2725 aa4.9□□□□□ -1.63
RUNX1T1-248ENST00000613302 KRTAP4-16G5E9R7 235 aaPredicted RBP4.88□□□□□ -1.63
RUNX1T1-248ENST00000613302 CELSR2Q9HCU4 2923 aa4.87□□□□□ -1.63
RUNX1T1-248ENST00000613302 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
RUNX1T1-248ENST00000613302 NBEAQ8NFP9 2946 aa4.86□□□□□ -1.63
RUNX1T1-248ENST00000613302 RPS29P62273 56 aaKnown RBP4.86□□□□□ -1.63
RUNX1T1-248ENST00000613302 KRTAP7-1Q8IUC3 87 aa4.85□□□□□ -1.63
RUNX1T1-248ENST00000613302 DMXL1Q9Y485 3027 aa4.82□□□□□ -1.64
RUNX1T1-248ENST00000613302 LAMA5O15230 3695 aa4.81□□□□□ -1.64
RUNX1T1-248ENST00000613302 TENM2Q9NT68 2774 aa4.81□□□□□ -1.64
RUNX1T1-248ENST00000613302 DCHS1Q96JQ0 3298 aa4.8□□□□□ -1.64
RUNX1T1-248ENST00000613302 CELSR1Q9NYQ6 3014 aa4.8□□□□□ -1.64
RUNX1T1-248ENST00000613302 PKD1L1Q8TDX9 2849 aa4.8□□□□□ -1.64
RUNX1T1-248ENST00000613302 CRCT1Q9UGL9 99 aa4.79□□□□□ -1.64
RUNX1T1-248ENST00000613302 KRTAP29-1A8MX34 341 aaPredicted RBP4.78□□□□□ -1.64
RUNX1T1-248ENST00000613302 ZFHX3Q15911 3703 aa4.77□□□□□ -1.65
RUNX1T1-248ENST00000613302 VWFP04275 2813 aa4.77□□□□□ -1.65
RUNX1T1-248ENST00000613302 DCHS2Q6V1P9 2916 aa4.76□□□□□ -1.65
RUNX1T1-248ENST00000613302 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
RUNX1T1-248ENST00000613302 NF1P21359 2839 aa4.75□□□□□ -1.65
RUNX1T1-248ENST00000613302 ASB16-AS1Q495Z4 193 aa4.75□□□□□ -1.65
RUNX1T1-248ENST00000613302 TPRXLQ17RH7 258 aa4.74□□□□□ -1.65
RUNX1T1-248ENST00000613302 RELNP78509 3460 aa4.74□□□□□ -1.65
RUNX1T1-248ENST00000613302 KRTAP13-1Q8IUC0 172 aa4.7□□□□□ -1.66
RUNX1T1-248ENST00000613302 KRTAP1-4P0C5Y4 121 aa4.68□□□□□ -1.66
RUNX1T1-248ENST00000613302 NIPBLQ6KC79 2804 aaeCLIP4.66□□□□□ -1.66
RUNX1T1-248ENST00000613302 CSMD1Q96PZ7 3565 aa4.65□□□□□ -1.67
RUNX1T1-248ENST00000613302 TENM3Q9P273 2699 aa4.65□□□□□ -1.67
RUNX1T1-248ENST00000613302 ZANQ9Y493 2812 aa4.65□□□□□ -1.67
RUNX1T1-248ENST00000613302 KRTAP13-3Q3SY46 172 aa4.63□□□□□ -1.67
RUNX1T1-248ENST00000613302 A6NN06 94 aa4.61□□□□□ -1.67
RUNX1T1-248ENST00000613302 DMDP11532 3685 aa4.58□□□□□ -1.68
RUNX1T1-248ENST00000613302 SPENQ96T58 3664 aaKnown RBP4.58□□□□□ -1.68
RUNX1T1-248ENST00000613302 FBN2P35556 2912 aa4.57□□□□□ -1.68
RUNX1T1-248ENST00000613302 PDZD2O15018 2839 aa4.56□□□□□ -1.68
RUNX1T1-248ENST00000613302 CUBNO60494 3623 aa4.56□□□□□ -1.68
RUNX1T1-248ENST00000613302 SMG1Q96Q15 3661 aaKnown RBP4.54□□□□□ -1.68
RUNX1T1-248ENST00000613302 H0YAA0 97 aa4.53□□□□□ -1.68
RUNX1T1-248ENST00000613302 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
RUNX1T1-248ENST00000613302 MUC3AQ02505 3323 aa4.52□□□□□ -1.69
RUNX1T1-248ENST00000613302 KRTAP12-2P59991 146 aa4.51□□□□□ -1.69
RUNX1T1-248ENST00000613302 CSMD2Q7Z408 3487 aa4.48□□□□□ -1.69
RUNX1T1-248ENST00000613302 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
RUNX1T1-248ENST00000613302 SRRM2Q9UQ35 2752 aaKnown RBP4.46□□□□□ -1.7
RUNX1T1-248ENST00000613302 LORP23490 312 aaPredicted RBP4.45□□□□□ -1.7
RUNX1T1-248ENST00000613302 TGP01266 2768 aa4.45□□□□□ -1.7
RUNX1T1-248ENST00000613302 SVEP1Q4LDE5 3571 aa4.41□□□□□ -1.7
RUNX1T1-248ENST00000613302 KRTAP4-5Q9BYR2 181 aa4.38□□□□□ -1.71
RUNX1T1-248ENST00000613302 MEGF8Q7Z7M0 2845 aa4.38□□□□□ -1.71
RUNX1T1-248ENST00000613302 HRNRQ86YZ3 2850 aaPredicted RBP4.34□□□□□ -1.71
RUNX1T1-248ENST00000613302 MXRA5Q9NR99 2828 aa4.33□□□□□ -1.72
RUNX1T1-248ENST00000613302 COL7A1Q02388 2944 aa4.29□□□□□ -1.72
RUNX1T1-248ENST00000613302 FBN1P35555 2871 aaKnown RBP4.25□□□□□ -1.73
RUNX1T1-248ENST00000613302 TRRAPQ9Y4A5 3859 aa4.24□□□□□ -1.73
RUNX1T1-248ENST00000613302 CSMD3Q7Z407 3707 aa4.24□□□□□ -1.73
RUNX1T1-248ENST00000613302 FBN3Q75N90 2809 aa4.24□□□□□ -1.73
RUNX1T1-248ENST00000613302 KRTAP13-4Q3LI77 160 aa4.22□□□□□ -1.73
RUNX1T1-248ENST00000613302 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
RUNX1T1-248ENST00000613302 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
RUNX1T1-248ENST00000613302 VPS13CQ709C8 3753 aa4.16□□□□□ -1.74
RUNX1T1-248ENST00000613302 KRTAP8-1Q8IUC2 63 aa4.12□□□□□ -1.75
RUNX1T1-248ENST00000613302 ANK3Q12955 4377 aaKnown RBP4.09□□□□□ -1.75
RUNX1T1-248ENST00000613302 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.75
RUNX1T1-248ENST00000613302 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
RUNX1T1-248ENST00000613302 MT1HL1P0DM35 61 aa4.07□□□□□ -1.76
RUNX1T1-248ENST00000613302 KRTAP3-1Q9BYR8 98 aa4.03□□□□□ -1.76
RUNX1T1-248ENST00000613302 BSNQ9UPA5 3926 aa4□□□□□ -1.77
RUNX1T1-248ENST00000613302 HUWE1Q7Z6Z7 4374 aaKnown RBP3.99□□□□□ -1.77
RUNX1T1-248ENST00000613302 OTOGQ6ZRI0 2925 aa3.97□□□□□ -1.77
RUNX1T1-248ENST00000613302 LCE3AQ5TA76 89 aa3.96□□□□□ -1.78
RUNX1T1-248ENST00000613302 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
RUNX1T1-248ENST00000613302 KRTAP12-3P60328 96 aa3.94□□□□□ -1.78
RUNX1T1-248ENST00000613302 INE1O15225 51 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms