RNA–Protein interactions for RNA: ENST00000611640.4

KDM4B-211, Transcript of lysine demethylase 4B, humanhuman

TSL 5 BASIC

Gene KDM4B, Length 5,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-211ENST00000611640 STAB2Q8WWQ8 2551 aa9.25□□□□□ -0.93
KDM4B-211ENST00000611640 FRYLO94915 3013 aa9.25□□□□□ -0.93
KDM4B-211ENST00000611640 LRBAP50851 2863 aa9.23□□□□□ -0.93
KDM4B-211ENST00000611640 PLAC4Q8WY50 150 aa9.21□□□□□ -0.93
KDM4B-211ENST00000611640 ADGRG4Q8IZF6 3080 aa9.21□□□□□ -0.94
KDM4B-211ENST00000611640 FLNCQ14315 2725 aa9.19□□□□□ -0.94
KDM4B-211ENST00000611640 COL6A3P12111 3177 aa9.18□□□□□ -0.94
KDM4B-211ENST00000611640 TACC2O95359 2948 aa9.17□□□□□ -0.94
KDM4B-211ENST00000611640 A8MUU9 505 aa9.16□□□□□ -0.94
KDM4B-211ENST00000611640 BOD1L1Q8NFC6 3051 aa9.16□□□□□ -0.94
KDM4B-211ENST00000611640 COL12A1Q99715 3063 aa9.14□□□□□ -0.95
KDM4B-211ENST00000611640 UTP20O75691 2785 aaKnown RBP9.13□□□□□ -0.95
KDM4B-211ENST00000611640 APCP25054 2843 aa9.12□□□□□ -0.95
KDM4B-211ENST00000611640 DMXL2Q8TDJ6 3036 aa9.11□□□□□ -0.95
KDM4B-211ENST00000611640 KMT2BQ9UMN6 2715 aaPredicted RBP9.11□□□□□ -0.95
KDM4B-211ENST00000611640 TNRC18O15417 2968 aaPredicted RBP9.11□□□□□ -0.95
KDM4B-211ENST00000611640 ZFHX4Q86UP3 3567 aa9.09□□□□□ -0.95
KDM4B-211ENST00000611640 ASPMQ8IZT6 3477 aa9.08□□□□□ -0.96
KDM4B-211ENST00000611640 ASH1LQ9NR48 2969 aaKnown RBP9.07□□□□□ -0.96
KDM4B-211ENST00000611640 SPENQ96T58 3664 aaKnown RBP9.04□□□□□ -0.96
KDM4B-211ENST00000611640 C20orf166-AS1Q96NR2 134 aa9.04□□□□□ -0.96
KDM4B-211ENST00000611640 KRTAP16-1A8MUX0 517 aa9.03□□□□□ -0.96
KDM4B-211ENST00000611640 HIVEP1P15822 2718 aa9.02□□□□□ -0.97
KDM4B-211ENST00000611640 MUC3AQ02505 3323 aa8.98□□□□□ -0.97
KDM4B-211ENST00000611640 SMG1Q96Q15 3661 aaKnown RBP8.95□□□□□ -0.98
KDM4B-211ENST00000611640 CFAP47Q6ZTR5 3102 aa8.94□□□□□ -0.98
KDM4B-211ENST00000611640 ZZEF1O43149 2961 aa8.94□□□□□ -0.98
KDM4B-211ENST00000611640 NDUFAF8A1L188 74 aa8.93□□□□□ -0.98
KDM4B-211ENST00000611640 TENM4Q6N022 2769 aa8.92□□□□□ -0.98
KDM4B-211ENST00000611640 KRTAP1-4P0C5Y4 121 aa8.92□□□□□ -0.98
KDM4B-211ENST00000611640 NIPBLQ6KC79 2804 aaeCLIP8.91□□□□□ -0.984e-6■■□□□ 13.2
KDM4B-211ENST00000611640 LOC400499M0QZD8 3231 aa8.89□□□□□ -0.99
KDM4B-211ENST00000611640 CELSR2Q9HCU4 2923 aa8.87□□□□□ -0.99
KDM4B-211ENST00000611640 DCHS1Q96JQ0 3298 aa8.86□□□□□ -0.99
KDM4B-211ENST00000611640 LAMA5O15230 3695 aa8.83□□□□□ -1
KDM4B-211ENST00000611640 TNP1P09430 55 aa8.81□□□□□ -1
KDM4B-211ENST00000611640 HRNRQ86YZ3 2850 aaPredicted RBP8.81□□□□□ -1
KDM4B-211ENST00000611640 ZANQ9Y493 2812 aa8.79□□□□□ -1
KDM4B-211ENST00000611640 XP32Q5T750 250 aa8.78□□□□□ -1
KDM4B-211ENST00000611640 CRYBG3Q68DQ2 2970 aa8.77□□□□□ -1
KDM4B-211ENST00000611640 H0YAA0 97 aa8.77□□□□□ -1.01
KDM4B-211ENST00000611640 KRTAP21-3Q3LHN1 58 aa8.77□□□□□ -1.01
KDM4B-211ENST00000611640 DCHS2Q6V1P9 2916 aa8.77□□□□□ -1.01
KDM4B-211ENST00000611640 CSMD1Q96PZ7 3565 aa8.75□□□□□ -1.01
KDM4B-211ENST00000611640 C10orf95Q9H7T3 257 aa8.71□□□□□ -1.02
KDM4B-211ENST00000611640 DMXL1Q9Y485 3027 aa8.68□□□□□ -1.02
KDM4B-211ENST00000611640 PP632Q6XCG6 107 aa8.63□□□□□ -1.03
KDM4B-211ENST00000611640 BSNQ9UPA5 3926 aa8.62□□□□□ -1.03
KDM4B-211ENST00000611640 FBN2P35556 2912 aa8.62□□□□□ -1.03
KDM4B-211ENST00000611640 SVEP1Q4LDE5 3571 aa8.58□□□□□ -1.04
KDM4B-211ENST00000611640 ZFHX3Q15911 3703 aa8.55□□□□□ -1.04
KDM4B-211ENST00000611640 TPRXLQ17RH7 258 aa8.55□□□□□ -1.04
KDM4B-211ENST00000611640 KRTAP13-3Q3SY46 172 aa8.53□□□□□ -1.04
KDM4B-211ENST00000611640 A0A1B0GVY2 172 aa8.52□□□□□ -1.05
KDM4B-211ENST00000611640 P0C880 135 aa8.51□□□□□ -1.05
KDM4B-211ENST00000611640 NF1P21359 2839 aa8.5□□□□□ -1.05
KDM4B-211ENST00000611640 KRTAP10-8P60410 259 aa8.5□□□□□ -1.05
KDM4B-211ENST00000611640 RELNP78509 3460 aa8.49□□□□□ -1.05
KDM4B-211ENST00000611640 CELSR1Q9NYQ6 3014 aa8.41□□□□□ -1.06
KDM4B-211ENST00000611640 TENM3Q9P273 2699 aa8.39□□□□□ -1.07
KDM4B-211ENST00000611640 TGP01266 2768 aa8.36□□□□□ -1.07
KDM4B-211ENST00000611640 MXRA5Q9NR99 2828 aa8.34□□□□□ -1.07
KDM4B-211ENST00000611640 TENM1Q9UKZ4 2725 aa8.34□□□□□ -1.07
KDM4B-211ENST00000611640 VPS13CQ709C8 3753 aa8.34□□□□□ -1.07
KDM4B-211ENST00000611640 KRTAP10-10P60014 251 aa8.28□□□□□ -1.08
KDM4B-211ENST00000611640 TENM2Q9NT68 2774 aa8.28□□□□□ -1.08
KDM4B-211ENST00000611640 KRTAP12-2P59991 146 aa8.23□□□□□ -1.09
KDM4B-211ENST00000611640 PRO2289Q9P1D8 64 aa8.15□□□□□ -1.11
KDM4B-211ENST00000611640 KRTAP3-1Q9BYR8 98 aa8.11□□□□□ -1.11
KDM4B-211ENST00000611640 PKD1L1Q8TDX9 2849 aa8.1□□□□□ -1.11
KDM4B-211ENST00000611640 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
KDM4B-211ENST00000611640 PDZD2O15018 2839 aa8.06□□□□□ -1.12
KDM4B-211ENST00000611640 KRTAP13-4Q3LI77 160 aa8.03□□□□□ -1.12
KDM4B-211ENST00000611640 CSMD2Q7Z408 3487 aa8.02□□□□□ -1.13
KDM4B-211ENST00000611640 CUBNO60494 3623 aa7.97□□□□□ -1.13
KDM4B-211ENST00000611640 NBPF19A0A087WUL8 3843 aa7.94□□□□□ -1.14
KDM4B-211ENST00000611640 VWFP04275 2813 aa7.93□□□□□ -1.14
KDM4B-211ENST00000611640 AKAP9Q99996 3911 aa7.92□□□□□ -1.14
KDM4B-211ENST00000611640 KRTAP10-6P60371 365 aaPredicted RBP7.88□□□□□ -1.15
KDM4B-211ENST00000611640 ANK3Q12955 4377 aaKnown RBP7.85□□□□□ -1.15
KDM4B-211ENST00000611640 FBN1P35555 2871 aaKnown RBP7.81□□□□□ -1.16
KDM4B-211ENST00000611640 OTOGQ6ZRI0 2925 aa7.8□□□□□ -1.16
KDM4B-211ENST00000611640 ZNF469Q96JG9 3925 aaPredicted RBP7.71□□□□□ -1.17
KDM4B-211ENST00000611640 SRRM2Q9UQ35 2752 aaKnown RBP7.71□□□□□ -1.18
KDM4B-211ENST00000611640 FBN3Q75N90 2809 aa7.69□□□□□ -1.18
KDM4B-211ENST00000611640 KRTAP3-2Q9BYR7 98 aa7.61□□□□□ -1.19
KDM4B-211ENST00000611640 MEGF8Q7Z7M0 2845 aa7.61□□□□□ -1.19
KDM4B-211ENST00000611640 KRTAP15-1Q3LI76 137 aa7.6□□□□□ -1.19
KDM4B-211ENST00000611640 KRTAP3-3Q9BYR6 98 aa7.6□□□□□ -1.19
KDM4B-211ENST00000611640 MT1HL1P0DM35 61 aa7.58□□□□□ -1.2
KDM4B-211ENST00000611640 TRRAPQ9Y4A5 3859 aa7.53□□□□□ -1.2
KDM4B-211ENST00000611640 HUWE1Q7Z6Z7 4374 aaKnown RBP7.46□□□□□ -1.21
KDM4B-211ENST00000611640 KRTAP10-4P60372 401 aaPredicted RBP7.45□□□□□ -1.22
KDM4B-211ENST00000611640 COL7A1Q02388 2944 aa7.4□□□□□ -1.23
KDM4B-211ENST00000611640 KRTAP10-12P60413 245 aa7.29□□□□□ -1.24
KDM4B-211ENST00000611640 INE1O15225 51 aa7.26□□□□□ -1.25
KDM4B-211ENST00000611640 KRTAP4-5Q9BYR2 181 aa7.24□□□□□ -1.25
KDM4B-211ENST00000611640 ALMS1Q8TCU4 4167 aa7.18□□□□□ -1.26
KDM4B-211ENST00000611640 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
KDM4B-211ENST00000611640 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms