RNA–Protein interactions for RNA: ENST00000610966.4

SVOP-205, Transcript of SV2 related protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVOP, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-205ENST00000610966 REV3LO60673 3130 aa5.41□□□□□ -1.54
SVOP-205ENST00000610966 COL6A3P12111 3177 aa5.41□□□□□ -1.54
SVOP-205ENST00000610966 KRTAP13-1Q8IUC0 172 aa5.4□□□□□ -1.54
SVOP-205ENST00000610966 ASH1LQ9NR48 2969 aaKnown RBP5.4□□□□□ -1.54
SVOP-205ENST00000610966 KRTAP13-2Q52LG2 175 aa5.4□□□□□ -1.55
SVOP-205ENST00000610966 HIVEP1P15822 2718 aa5.39□□□□□ -1.55
SVOP-205ENST00000610966 APCP25054 2843 aa5.39□□□□□ -1.55
SVOP-205ENST00000610966 KRTAP21-3Q3LHN1 58 aa5.35□□□□□ -1.55
SVOP-205ENST00000610966 A6NN06 94 aa5.34□□□□□ -1.55
SVOP-205ENST00000610966 ZZEF1O43149 2961 aa5.34□□□□□ -1.55
SVOP-205ENST00000610966 CRYBG3Q68DQ2 2970 aa5.33□□□□□ -1.56
SVOP-205ENST00000610966 NDUFAF8A1L188 74 aa5.33□□□□□ -1.56
SVOP-205ENST00000610966 CFAP47Q6ZTR5 3102 aa5.32□□□□□ -1.56
SVOP-205ENST00000610966 NIPBLQ6KC79 2804 aaeCLIP5.32□□□□□ -1.56
SVOP-205ENST00000610966 CELSR2Q9HCU4 2923 aa5.32□□□□□ -1.56
SVOP-205ENST00000610966 TENM4Q6N022 2769 aa5.32□□□□□ -1.56
SVOP-205ENST00000610966 C20orf166-AS1Q96NR2 134 aa5.3□□□□□ -1.56
SVOP-205ENST00000610966 EYSQ5T1H1 3165 aa5.29□□□□□ -1.56
SVOP-205ENST00000610966 A8MUU9 505 aa5.28□□□□□ -1.56
SVOP-205ENST00000610966 A8MU10 97 aa5.27□□□□□ -1.57
SVOP-205ENST00000610966 TNRC18O15417 2968 aaPredicted RBP5.25□□□□□ -1.57
SVOP-205ENST00000610966 DCHS2Q6V1P9 2916 aa5.25□□□□□ -1.57
SVOP-205ENST00000610966 ZANQ9Y493 2812 aa5.24□□□□□ -1.57
SVOP-205ENST00000610966 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
SVOP-205ENST00000610966 SPEGQ15772 3267 aa5.21□□□□□ -1.58
SVOP-205ENST00000610966 USP34Q70CQ2 3546 aa5.2□□□□□ -1.58
SVOP-205ENST00000610966 DMXL1Q9Y485 3027 aa5.19□□□□□ -1.58
SVOP-205ENST00000610966 SPTBN5Q9NRC6 3674 aaKnown RBP5.15□□□□□ -1.58
SVOP-205ENST00000610966 KRTAP1-4P0C5Y4 121 aa5.15□□□□□ -1.59
SVOP-205ENST00000610966 HRNRQ86YZ3 2850 aaPredicted RBP5.15□□□□□ -1.59
SVOP-205ENST00000610966 FBN2P35556 2912 aa5.12□□□□□ -1.59
SVOP-205ENST00000610966 LOC400499M0QZD8 3231 aa5.11□□□□□ -1.59
SVOP-205ENST00000610966 A0A1B0GVY2 172 aa5.11□□□□□ -1.59
SVOP-205ENST00000610966 NF1P21359 2839 aa5.1□□□□□ -1.59
SVOP-205ENST00000610966 XP32Q5T750 250 aa5.09□□□□□ -1.59
SVOP-205ENST00000610966 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
SVOP-205ENST00000610966 TNP1P09430 55 aa5.07□□□□□ -1.6
SVOP-205ENST00000610966 TENM1Q9UKZ4 2725 aa5.06□□□□□ -1.6
SVOP-205ENST00000610966 TENM3Q9P273 2699 aa5.05□□□□□ -1.6
SVOP-205ENST00000610966 CELSR1Q9NYQ6 3014 aa5.01□□□□□ -1.61
SVOP-205ENST00000610966 TPRXLQ17RH7 258 aa5□□□□□ -1.61
SVOP-205ENST00000610966 P0C880 135 aa4.98□□□□□ -1.61
SVOP-205ENST00000610966 TENM2Q9NT68 2774 aa4.98□□□□□ -1.61
SVOP-205ENST00000610966 MYO15AQ9UKN7 3530 aa4.98□□□□□ -1.61
SVOP-205ENST00000610966 KRTAP10-8P60410 259 aa4.95□□□□□ -1.62
SVOP-205ENST00000610966 H0YAA0 97 aa4.94□□□□□ -1.62
SVOP-205ENST00000610966 MXRA5Q9NR99 2828 aa4.94□□□□□ -1.62
SVOP-205ENST00000610966 KRTAP13-3Q3SY46 172 aa4.93□□□□□ -1.62
SVOP-205ENST00000610966 PP632Q6XCG6 107 aa4.92□□□□□ -1.62
SVOP-205ENST00000610966 RELNP78509 3460 aa4.89□□□□□ -1.63
SVOP-205ENST00000610966 PKD1L1Q8TDX9 2849 aa4.89□□□□□ -1.63
SVOP-205ENST00000610966 DCHS1Q96JQ0 3298 aa4.88□□□□□ -1.63
SVOP-205ENST00000610966 TGP01266 2768 aa4.88□□□□□ -1.63
SVOP-205ENST00000610966 WDFY3Q8IZQ1 3526 aa4.87□□□□□ -1.63
SVOP-205ENST00000610966 KRTAP10-10P60014 251 aa4.86□□□□□ -1.63
SVOP-205ENST00000610966 VWFP04275 2813 aa4.81□□□□□ -1.64
SVOP-205ENST00000610966 PDZD2O15018 2839 aa4.78□□□□□ -1.64
SVOP-205ENST00000610966 PRO2289Q9P1D8 64 aa4.77□□□□□ -1.65
SVOP-205ENST00000610966 ASPMQ8IZT6 3477 aa4.76□□□□□ -1.65
SVOP-205ENST00000610966 LAMA5O15230 3695 aa4.72□□□□□ -1.65
SVOP-205ENST00000610966 ZFHX4Q86UP3 3567 aa4.71□□□□□ -1.66
SVOP-205ENST00000610966 NBPF19A0A087WUL8 3843 aa4.7□□□□□ -1.66
SVOP-205ENST00000610966 FBN1P35555 2871 aaKnown RBP4.7□□□□□ -1.66
SVOP-205ENST00000610966 MUC3AQ02505 3323 aa4.66□□□□□ -1.66
SVOP-205ENST00000610966 OTOGQ6ZRI0 2925 aa4.65□□□□□ -1.66
SVOP-205ENST00000610966 KRTAP12-2P59991 146 aa4.65□□□□□ -1.66
SVOP-205ENST00000610966 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
SVOP-205ENST00000610966 CSMD1Q96PZ7 3565 aa4.64□□□□□ -1.67
SVOP-205ENST00000610966 KRTAP3-1Q9BYR8 98 aa4.6□□□□□ -1.67
SVOP-205ENST00000610966 ZFHX3Q15911 3703 aa4.6□□□□□ -1.67
SVOP-205ENST00000610966 SRRM2Q9UQ35 2752 aaKnown RBP4.59□□□□□ -1.67
SVOP-205ENST00000610966 KRTAP12-1P59990 96 aa4.58□□□□□ -1.68
SVOP-205ENST00000610966 KRTAP13-4Q3LI77 160 aa4.57□□□□□ -1.68
SVOP-205ENST00000610966 FBN3Q75N90 2809 aa4.57□□□□□ -1.68
SVOP-205ENST00000610966 DMDP11532 3685 aa4.55□□□□□ -1.68
SVOP-205ENST00000610966 SMG1Q96Q15 3661 aaKnown RBP4.54□□□□□ -1.68
SVOP-205ENST00000610966 ANK3Q12955 4377 aaKnown RBP4.51□□□□□ -1.69
SVOP-205ENST00000610966 MEGF8Q7Z7M0 2845 aa4.5□□□□□ -1.69
SVOP-205ENST00000610966 CSMD2Q7Z408 3487 aa4.48□□□□□ -1.69
SVOP-205ENST00000610966 COL7A1Q02388 2944 aa4.47□□□□□ -1.69
SVOP-205ENST00000610966 KRTAP10-6P60371 365 aaPredicted RBP4.46□□□□□ -1.69
SVOP-205ENST00000610966 SVEP1Q4LDE5 3571 aa4.46□□□□□ -1.69
SVOP-205ENST00000610966 MT1HL1P0DM35 61 aa4.43□□□□□ -1.7
SVOP-205ENST00000610966 CUBNO60494 3623 aa4.42□□□□□ -1.7
SVOP-205ENST00000610966 TRRAPQ9Y4A5 3859 aa4.41□□□□□ -1.7
SVOP-205ENST00000610966 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
SVOP-205ENST00000610966 SPENQ96T58 3664 aaKnown RBP4.36□□□□□ -1.71
SVOP-205ENST00000610966 KRTAP10-4P60372 401 aaPredicted RBP4.32□□□□□ -1.72
SVOP-205ENST00000610966 KRTAP3-3Q9BYR6 98 aa4.32□□□□□ -1.72
SVOP-205ENST00000610966 KRTAP3-2Q9BYR7 98 aa4.3□□□□□ -1.72
SVOP-205ENST00000610966 KRTAP4-5Q9BYR2 181 aa4.29□□□□□ -1.72
SVOP-205ENST00000610966 HUWE1Q7Z6Z7 4374 aaKnown RBP4.27□□□□□ -1.73
SVOP-205ENST00000610966 BSNQ9UPA5 3926 aa4.25□□□□□ -1.73
SVOP-205ENST00000610966 INE1O15225 51 aa4.22□□□□□ -1.73
SVOP-205ENST00000610966 KRTAP10-12P60413 245 aa4.21□□□□□ -1.74
SVOP-205ENST00000610966 VPS13CQ709C8 3753 aa4.15□□□□□ -1.75
SVOP-205ENST00000610966 LORP23490 312 aaPredicted RBP4.1□□□□□ -1.75
SVOP-205ENST00000610966 ALMS1Q8TCU4 4167 aa4.09□□□□□ -1.75
SVOP-205ENST00000610966 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
SVOP-205ENST00000610966 KRTAP23-1A1A580 65 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms