RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 FAM236AA0A1B0GUQ0 79 aa14.73□□□□□ -0.05
SCAMP4-210ENST00000588555 FAM236BA0A1B0GV22 79 aa14.73□□□□□ -0.05
SCAMP4-210ENST00000588555 NDUFB1O75438 58 aa14.72□□□□□ -0.05
SCAMP4-210ENST00000588555 A0A1B0GVX0 72 aa14.69□□□□□ -0.06
SCAMP4-210ENST00000588555 DMBT1Q9UGM3 2413 aaPredicted RBP14.68□□□□□ -0.06
SCAMP4-210ENST00000588555 KRTAP29-1A8MX34 341 aaPredicted RBP14.66□□□□□ -0.06
SCAMP4-210ENST00000588555 IGHV6-1A0A0B4J1U7 121 aa14.64□□□□□ -0.07
SCAMP4-210ENST00000588555 HCG22E2RYF7 251 aa14.62□□□□□ -0.07
SCAMP4-210ENST00000588555 MMP24-AS1A0A0U1RRL7 71 aa14.61□□□□□ -0.07
SCAMP4-210ENST00000588555 NOTCH2NLQ7Z3S9 236 aa14.6□□□□□ -0.07
SCAMP4-210ENST00000588555 RETNLBQ9BQ08 111 aa14.59□□□□□ -0.07
SCAMP4-210ENST00000588555 C8orf17Q9NRJ1 99 aa14.59□□□□□ -0.07
SCAMP4-210ENST00000588555 WFDC13Q8IUB5 93 aa14.56□□□□□ -0.08
SCAMP4-210ENST00000588555 CASC2Q6XLA1 102 aa14.53□□□□□ -0.08
SCAMP4-210ENST00000588555 ATOX1O00244 68 aa14.52□□□□□ -0.09
SCAMP4-210ENST00000588555 C8orf87E5RJ46 101 aa14.51□□□□□ -0.09
SCAMP4-210ENST00000588555 hDV103S1A0JD37 113 aa14.5□□□□□ -0.09
SCAMP4-210ENST00000588555 LINC00313P59037 77 aa14.47□□□□□ -0.09
SCAMP4-210ENST00000588555 TMEM254Q8TBM7 123 aa14.42□□□□□ -0.1
SCAMP4-210ENST00000588555 ANAPC13Q9BS18 74 aa14.42□□□□□ -0.1
SCAMP4-210ENST00000588555 FP248Q71RG6 208 aaPredicted RBP14.41□□□□□ -0.1
SCAMP4-210ENST00000588555 OCR1Q9BZK8 76 aa14.41□□□□□ -0.1
SCAMP4-210ENST00000588555 MRPL34Q9BQ48 92 aaKnown RBP14.4□□□□□ -0.1
SCAMP4-210ENST00000588555 PCLOQ9Y6V0 5065 aa14.4□□□□□ -0.1
SCAMP4-210ENST00000588555 KRTAP16-1A8MUX0 517 aa14.39□□□□□ -0.11
SCAMP4-210ENST00000588555 J3QL48 77 aa14.39□□□□□ -0.11
SCAMP4-210ENST00000588555 SMIM20Q8N5G0 67 aa14.37□□□□□ -0.11
SCAMP4-210ENST00000588555 SERP2Q8N6R1 65 aa14.34□□□□□ -0.11
SCAMP4-210ENST00000588555 TRAV7A0A075B6U4 112 aa14.33□□□□□ -0.12
SCAMP4-210ENST00000588555 PCP4P48539 62 aa14.33□□□□□ -0.12
SCAMP4-210ENST00000588555 C9orf92A6NGG3 77 aa14.31□□□□□ -0.12
SCAMP4-210ENST00000588555 IGLV7-46A0A075B6I9 117 aa14.29□□□□□ -0.12
SCAMP4-210ENST00000588555 Q8N9P0 234 aaPredicted RBP14.29□□□□□ -0.12
SCAMP4-210ENST00000588555 COX7CP15954 63 aa14.25□□□□□ -0.13
SCAMP4-210ENST00000588555 NDUFS5O43920 106 aa14.24□□□□□ -0.13
SCAMP4-210ENST00000588555 PRR4Q16378 134 aa14.23□□□□□ -0.13
SCAMP4-210ENST00000588555 TP53AIP1Q9HCN2 124 aa14.22□□□□□ -0.13
SCAMP4-210ENST00000588555 UQCRQO14949 82 aa14.21□□□□□ -0.13
SCAMP4-210ENST00000588555 KRTAP13-3Q3SY46 172 aa14.21□□□□□ -0.13
SCAMP4-210ENST00000588555 CCDC179H3BU77 68 aa14.15□□□□□ -0.14
SCAMP4-210ENST00000588555 C20orf166-AS1Q96NR2 134 aa14.15□□□□□ -0.14
SCAMP4-210ENST00000588555 A8MUU9 505 aa14.14□□□□□ -0.15
SCAMP4-210ENST00000588555 C5orf47Q569G3 176 aa14.12□□□□□ -0.15
SCAMP4-210ENST00000588555 Q5W150 140 aa14.1□□□□□ -0.15
SCAMP4-210ENST00000588555 TRAV22A0A0B4J277 110 aa14.09□□□□□ -0.15
SCAMP4-210ENST00000588555 TPRXLQ17RH7 258 aa14.09□□□□□ -0.15
SCAMP4-210ENST00000588555 C20orf197Q8N268 126 aa14.07□□□□□ -0.16
SCAMP4-210ENST00000588555 H0Y9P7 68 aa14.06□□□□□ -0.16
SCAMP4-210ENST00000588555 HERC1Q15751 4861 aa14.06□□□□□ -0.16
SCAMP4-210ENST00000588555 XP32Q5T750 250 aa14.06□□□□□ -0.16
SCAMP4-210ENST00000588555 Q75L30 129 aa14.04□□□□□ -0.16
SCAMP4-210ENST00000588555 LPAP08519 4548 aa14.03□□□□□ -0.16
SCAMP4-210ENST00000588555 A0A0U1RQV1 116 aa14.02□□□□□ -0.16
SCAMP4-210ENST00000588555 MP68P56378 58 aa14.02□□□□□ -0.16
SCAMP4-210ENST00000588555 KLKP1Q107X0 134 aa13.99□□□□□ -0.17
SCAMP4-210ENST00000588555 SNURFQ9Y675 71 aa13.99□□□□□ -0.17
SCAMP4-210ENST00000588555 ZCCHC13Q8WW36 166 aaKnown RBP13.98□□□□□ -0.17
SCAMP4-210ENST00000588555 LINC00208Q96KT6 92 aa13.97□□□□□ -0.17
SCAMP4-210ENST00000588555 CYSTM1Q9H1C7 97 aa13.97□□□□□ -0.17
SCAMP4-210ENST00000588555 H3BPC8 53 aa13.96□□□□□ -0.18
SCAMP4-210ENST00000588555 RPL37P61927 97 aaKnown RBP13.94□□□□□ -0.18
SCAMP4-210ENST00000588555 LRP2P98164 4655 aa13.93□□□□□ -0.18
SCAMP4-210ENST00000588555 C1orf64Q8NEQ6 169 aa13.93□□□□□ -0.18
SCAMP4-210ENST00000588555 HMCN2Q8NDA2 5059 aa13.86□□□□□ -0.19
SCAMP4-210ENST00000588555 LOC101927531A0A1B0GV80 90 aa13.83□□□□□ -0.19
SCAMP4-210ENST00000588555 ATP11AUNQ6ZP68 121 aa13.81□□□□□ -0.2
SCAMP4-210ENST00000588555 IGKV2-30P06310 120 aa13.81□□□□□ -0.2
SCAMP4-210ENST00000588555 H7BZZ5 65 aa13.8□□□□□ -0.2
SCAMP4-210ENST00000588555 CYP4F30PQ9H0H9 118 aa13.78□□□□□ -0.2
SCAMP4-210ENST00000588555 NDUFC1O43677 76 aa13.77□□□□□ -0.21
SCAMP4-210ENST00000588555 IGKV2D-30A0A075B6S6 120 aa13.74□□□□□ -0.21
SCAMP4-210ENST00000588555 PCOTHQ58A44 107 aa13.68□□□□□ -0.22
SCAMP4-210ENST00000588555 C7orf65Q6ZTY9 151 aa13.68□□□□□ -0.22
SCAMP4-210ENST00000588555 SPINK7P58062 85 aa13.64□□□□□ -0.23
SCAMP4-210ENST00000588555 TMEM258P61165 79 aa13.6□□□□□ -0.23
SCAMP4-210ENST00000588555 SEC61BP60468 96 aaKnown RBP13.56□□□□□ -0.24
SCAMP4-210ENST00000588555 MUC17Q685J3 4493 aa13.56□□□□□ -0.24
SCAMP4-210ENST00000588555 HRES1P13985 223 aa13.55□□□□□ -0.24
SCAMP4-210ENST00000588555 SPANXA2-OT1Q8N9U9 137 aa13.54□□□□□ -0.24
SCAMP4-210ENST00000588555 FAM236DA0A1B0GTK5 79 aa13.49□□□□□ -0.25
SCAMP4-210ENST00000588555 FAM236CP0DP71 79 aa13.49□□□□□ -0.25
SCAMP4-210ENST00000588555 ATP5EP56381 51 aaPredicted RBP13.43□□□□□ -0.26
SCAMP4-210ENST00000588555 C4orf26Q17RF5 130 aa13.41□□□□□ -0.26
SCAMP4-210ENST00000588555 KRTAP4-1Q9BYQ7 146 aa13.37□□□□□ -0.27
SCAMP4-210ENST00000588555 DMAC1Q96GE9 116 aa13.32□□□□□ -0.28
SCAMP4-210ENST00000588555 MPLKIPQ8TAP9 179 aa13.29□□□□□ -0.28
SCAMP4-210ENST00000588555 KRTAP3-1Q9BYR8 98 aa13.27□□□□□ -0.28
SCAMP4-210ENST00000588555 COX6B2Q6YFQ2 88 aa13.27□□□□□ -0.29
SCAMP4-210ENST00000588555 UBR4Q5T4S7 5183 aa13.25□□□□□ -0.29
SCAMP4-210ENST00000588555 MUC2Q02817 5179 aa13.24□□□□□ -0.29
SCAMP4-210ENST00000588555 A8MUN3 132 aa13.21□□□□□ -0.29
SCAMP4-210ENST00000588555 ACYP2P14621 99 aa13.18□□□□□ -0.3
SCAMP4-210ENST00000588555 SERP1Q9Y6X1 66 aa13.17□□□□□ -0.3
SCAMP4-210ENST00000588555 COA5Q86WW8 74 aa13.13□□□□□ -0.31
SCAMP4-210ENST00000588555 RBM12B-AS1Q9P1G2 102 aa13.12□□□□□ -0.31
SCAMP4-210ENST00000588555 RNF213Q63HN8 5207 aa13.09□□□□□ -0.31
SCAMP4-210ENST00000588555 RPS28P62857 69 aaKnown RBP13.08□□□□□ -0.32
SCAMP4-210ENST00000588555 KRTAP19-2Q3LHN2 52 aa13.02□□□□□ -0.32
SCAMP4-210ENST00000588555 H1FX-AS1Q4G0G2 97 aa12.98□□□□□ -0.33
SCAMP4-210ENST00000588555 CHKB-CPT1BH3BT56 60 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms