RNA–Protein interactions for RNA: ENST00000587246.1

NEDD4L-217, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-217ENST00000587246 FAT2Q9NYQ8 4349 aa0.96□□□□□ -2.26
NEDD4L-217ENST00000587246 ZFHX4Q86UP3 3567 aa0.96□□□□□ -2.26
NEDD4L-217ENST00000587246 FCGBPQ9Y6R7 5405 aaPredicted RBP0.95□□□□□ -2.26
NEDD4L-217ENST00000587246 DCHS2Q6V1P9 2916 aa0.95□□□□□ -2.26
NEDD4L-217ENST00000587246 NBASA2RRP1 2371 aa0.94□□□□□ -2.26
NEDD4L-217ENST00000587246 CCDC168Q8NDH2 2452 aa0.94□□□□□ -2.26
NEDD4L-217ENST00000587246 HMCN1Q96RW7 5635 aa0.94□□□□□ -2.26
NEDD4L-217ENST00000587246 RPL39P5Q59GN2 51 aa0.94□□□□□ -2.26
NEDD4L-217ENST00000587246 ZZEF1O43149 2961 aa0.94□□□□□ -2.26
NEDD4L-217ENST00000587246 CEP350Q5VT06 3117 aa0.94□□□□□ -2.26
NEDD4L-217ENST00000587246 SACSQ9NZJ4 4579 aa0.94□□□□□ -2.26
NEDD4L-217ENST00000587246 VPS13BQ7Z7G8 4022 aa0.93□□□□□ -2.26
NEDD4L-217ENST00000587246 RELNP78509 3460 aa0.93□□□□□ -2.26
NEDD4L-217ENST00000587246 CHD8Q9HCK8 2581 aa0.93□□□□□ -2.26
NEDD4L-217ENST00000587246 M0QZ58 72 aa0.93□□□□□ -2.26
NEDD4L-217ENST00000587246 SPTBN4Q9H254 2564 aa0.93□□□□□ -2.26
NEDD4L-217ENST00000587246 KMT2AQ03164 3969 aa0.92□□□□□ -2.26
NEDD4L-217ENST00000587246 SETD2Q9BYW2 2564 aaPredicted RBP0.92□□□□□ -2.26
NEDD4L-217ENST00000587246 APCP25054 2843 aa0.92□□□□□ -2.26
NEDD4L-217ENST00000587246 DMBT1Q9UGM3 2413 aaPredicted RBP0.92□□□□□ -2.26
NEDD4L-217ENST00000587246 M0R2T5 61 aa0.92□□□□□ -2.26
NEDD4L-217ENST00000587246 ZNF469Q96JG9 3925 aaPredicted RBP0.92□□□□□ -2.26
NEDD4L-217ENST00000587246 USP24Q9UPU5 2620 aa0.92□□□□□ -2.26
NEDD4L-217ENST00000587246 DNAH8Q96JB1 4490 aa0.92□□□□□ -2.26
NEDD4L-217ENST00000587246 COL12A1Q99715 3063 aa0.91□□□□□ -2.26
NEDD4L-217ENST00000587246 DEFB108AA8MXU0 73 aa0.91□□□□□ -2.26
NEDD4L-217ENST00000587246 NF1P21359 2839 aa0.91□□□□□ -2.26
NEDD4L-217ENST00000587246 CFAP54Q96N23 3096 aa0.9□□□□□ -2.26
NEDD4L-217ENST00000587246 SPINK6Q6UWN8 80 aa0.9□□□□□ -2.27
NEDD4L-217ENST00000587246 SMR3AQ99954 134 aa0.9□□□□□ -2.27
NEDD4L-217ENST00000587246 FRAS1Q86XX4 4008 aa0.9□□□□□ -2.27
NEDD4L-217ENST00000587246 SPTBN5Q9NRC6 3674 aaKnown RBP0.89□□□□□ -2.27
NEDD4L-217ENST00000587246 COL6A3P12111 3177 aa0.89□□□□□ -2.27
NEDD4L-217ENST00000587246 GCN1Q92616 2671 aaKnown RBP0.89□□□□□ -2.27
NEDD4L-217ENST00000587246 TENM1Q9UKZ4 2725 aa0.88□□□□□ -2.27
NEDD4L-217ENST00000587246 PKHD1L1Q86WI1 4243 aa0.88□□□□□ -2.27
NEDD4L-217ENST00000587246 MAP1BP46821 2468 aaKnown RBP0.88□□□□□ -2.27
NEDD4L-217ENST00000587246 PCNTO95613 3336 aa0.88□□□□□ -2.27
NEDD4L-217ENST00000587246 USP9XQ93008 2570 aaPredicted RBP0.88□□□□□ -2.27
NEDD4L-217ENST00000587246 PKD1L1Q8TDX9 2849 aa0.88□□□□□ -2.27
NEDD4L-217ENST00000587246 HIVEP3Q5T1R4 2406 aa0.87□□□□□ -2.27
NEDD4L-217ENST00000587246 SETXQ7Z333 2677 aaKnown RBP0.87□□□□□ -2.27
NEDD4L-217ENST00000587246 DYNC2H1Q8NCM8 4307 aaKnown RBP0.87□□□□□ -2.27
NEDD4L-217ENST00000587246 TNXBP22105 4242 aa0.87□□□□□ -2.27
NEDD4L-217ENST00000587246 FLNCQ14315 2725 aa0.87□□□□□ -2.27
NEDD4L-217ENST00000587246 KRTAP2-3P0C7H8 128 aa0.86□□□□□ -2.27
NEDD4L-217ENST00000587246 KRTAP2-4Q9BYR9 128 aa0.86□□□□□ -2.27
NEDD4L-217ENST00000587246 KRTAP2-1Q9BYU5 128 aa0.86□□□□□ -2.27
NEDD4L-217ENST00000587246 DMXL1Q9Y485 3027 aa0.86□□□□□ -2.27
NEDD4L-217ENST00000587246 TACC2O95359 2948 aa0.86□□□□□ -2.27
NEDD4L-217ENST00000587246 HECTD4Q9Y4D8 3996 aa0.86□□□□□ -2.27
NEDD4L-217ENST00000587246 DNAH3Q8TD57 4116 aa0.86□□□□□ -2.27
NEDD4L-217ENST00000587246 DNAH2Q9P225 4427 aa0.85□□□□□ -2.27
NEDD4L-217ENST00000587246 TNP1P09430 55 aa0.85□□□□□ -2.27
NEDD4L-217ENST00000587246 CUBNO60494 3623 aa0.85□□□□□ -2.27
NEDD4L-217ENST00000587246 C5orf42Q9H799 3197 aa0.85□□□□□ -2.27
NEDD4L-217ENST00000587246 TEP1Q99973 2627 aaKnown RBP0.85□□□□□ -2.27
NEDD4L-217ENST00000587246 SZT2Q5T011 3432 aa0.85□□□□□ -2.27
NEDD4L-217ENST00000587246 RIF1Q5UIP0 2472 aaKnown RBP0.84□□□□□ -2.27
NEDD4L-217ENST00000587246 AKAP9Q99996 3911 aa0.84□□□□□ -2.27
NEDD4L-217ENST00000587246 KALRNO60229 2985 aa0.84□□□□□ -2.27
NEDD4L-217ENST00000587246 APC2O95996 2303 aa0.84□□□□□ -2.28
NEDD4L-217ENST00000587246 HUWE1Q7Z6Z7 4374 aaKnown RBP0.84□□□□□ -2.28
NEDD4L-217ENST00000587246 ANKRD11Q6UB99 2663 aaPredicted RBP0.83□□□□□ -2.28
NEDD4L-217ENST00000587246 HSPG2P98160 4391 aa0.83□□□□□ -2.28
NEDD4L-217ENST00000587246 USP9YO00507 2555 aaPredicted RBP0.83□□□□□ -2.28
NEDD4L-217ENST00000587246 EPG5Q9HCE0 2579 aa0.83□□□□□ -2.28
NEDD4L-217ENST00000587246 C9orf92A6NGG3 77 aa0.83□□□□□ -2.28
NEDD4L-217ENST00000587246 H3BNG1 76 aa0.83□□□□□ -2.28
NEDD4L-217ENST00000587246 PRM1P04553 51 aa0.83□□□□□ -2.28
NEDD4L-217ENST00000587246 CELSR3Q9NYQ7 3312 aa0.83□□□□□ -2.28
NEDD4L-217ENST00000587246 ANK3Q12955 4377 aaKnown RBP0.83□□□□□ -2.28
NEDD4L-217ENST00000587246 MAST4O15021 2626 aa0.83□□□□□ -2.28
NEDD4L-217ENST00000587246 LAMA5O15230 3695 aa0.83□□□□□ -2.28
NEDD4L-217ENST00000587246 DNAH7Q8WXX0 4024 aa0.82□□□□□ -2.28
NEDD4L-217ENST00000587246 NBEAL2Q6ZNJ1 2754 aa0.82□□□□□ -2.28
NEDD4L-217ENST00000587246 U3KQA8 63 aa0.82□□□□□ -2.28
NEDD4L-217ENST00000587246 ITPR3Q14573 2671 aa0.82□□□□□ -2.28
NEDD4L-217ENST00000587246 LRRK2Q5S007 2527 aa0.82□□□□□ -2.28
NEDD4L-217ENST00000587246 FRYLO94915 3013 aa0.82□□□□□ -2.28
NEDD4L-217ENST00000587246 ATMQ13315 3056 aa0.82□□□□□ -2.28
NEDD4L-217ENST00000587246 DMXL2Q8TDJ6 3036 aa0.81□□□□□ -2.28
NEDD4L-217ENST00000587246 PRUNE2Q8WUY3 3088 aa0.81□□□□□ -2.28
NEDD4L-217ENST00000587246 FAM186AA6NE01 2351 aa0.81□□□□□ -2.28
NEDD4L-217ENST00000587246 SPART-AS1P0CW21 52 aa0.81□□□□□ -2.28
NEDD4L-217ENST00000587246 APELAP0DMC3 54 aa0.81□□□□□ -2.28
NEDD4L-217ENST00000587246 KRTAP19-3Q7Z4W3 81 aa0.81□□□□□ -2.28
NEDD4L-217ENST00000587246 ACANP16112 2415 aa0.81□□□□□ -2.28
NEDD4L-217ENST00000587246 FLNBO75369 2602 aaKnown RBP0.81□□□□□ -2.28
NEDD4L-217ENST00000587246 PTPN13Q12923 2485 aa0.8□□□□□ -2.28
NEDD4L-217ENST00000587246 DOPEY1Q5JWR5 2465 aa0.8□□□□□ -2.28
NEDD4L-217ENST00000587246 VCANP13611 3396 aa0.8□□□□□ -2.28
NEDD4L-217ENST00000587246 CEP250Q9BV73 2442 aa0.8□□□□□ -2.28
NEDD4L-217ENST00000587246 MTORP42345 2549 aa0.8□□□□□ -2.28
NEDD4L-217ENST00000587246 ZFYVE26Q68DK2 2539 aa0.8□□□□□ -2.28
NEDD4L-217ENST00000587246 DEFB110Q30KQ9 67 aa0.79□□□□□ -2.28
NEDD4L-217ENST00000587246 NCOR2Q9Y618 2525 aa0.79□□□□□ -2.28
NEDD4L-217ENST00000587246 SMG1Q96Q15 3661 aaKnown RBP0.79□□□□□ -2.28
NEDD4L-217ENST00000587246 NOTCH1P46531 2555 aa0.79□□□□□ -2.28
NEDD4L-217ENST00000587246 PKD1P98161 4303 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms