RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 TENM4Q6N022 2769 aa1.14□□□□□ -2.23
SMG8-205ENST00000580798 TENM2Q9NT68 2774 aa1.14□□□□□ -2.23
SMG8-205ENST00000580798 SPTBN4Q9H254 2564 aa1.13□□□□□ -2.23
SMG8-205ENST00000580798 SRRM2Q9UQ35 2752 aaKnown RBP1.13□□□□□ -2.23
SMG8-205ENST00000580798 KRTAP8-1Q8IUC2 63 aa1.12□□□□□ -2.23
SMG8-205ENST00000580798 NAV2Q8IVL1 2488 aa1.12□□□□□ -2.23
SMG8-205ENST00000580798 POLQO75417 2590 aa1.11□□□□□ -2.23
SMG8-205ENST00000580798 NBASA2RRP1 2371 aa1.11□□□□□ -2.23
SMG8-205ENST00000580798 CCDC168Q8NDH2 2452 aa1.11□□□□□ -2.23
SMG8-205ENST00000580798 HTN3P15516 51 aa1.1□□□□□ -2.23
SMG8-205ENST00000580798 AKAP13Q12802 2813 aa1.1□□□□□ -2.23
SMG8-205ENST00000580798 UBR5O95071 2799 aaPredicted RBP1.08□□□□□ -2.24
SMG8-205ENST00000580798 CELSR1Q9NYQ6 3014 aa1.08□□□□□ -2.24
SMG8-205ENST00000580798 CREBBPQ92793 2442 aa1.08□□□□□ -2.24
SMG8-205ENST00000580798 PRM1P04553 51 aa1.08□□□□□ -2.24
SMG8-205ENST00000580798 CHD9Q3L8U1 2897 aa1.06□□□□□ -2.24
SMG8-205ENST00000580798 CHD6Q8TD26 2715 aa1.05□□□□□ -2.24
SMG8-205ENST00000580798 VWFP04275 2813 aa1.05□□□□□ -2.24
SMG8-205ENST00000580798 OTOGQ6ZRI0 2925 aa1.05□□□□□ -2.24
SMG8-205ENST00000580798 MAP1BP46821 2468 aaKnown RBP1.04□□□□□ -2.24
SMG8-205ENST00000580798 SETD2Q9BYW2 2564 aaPredicted RBP1.03□□□□□ -2.24
SMG8-205ENST00000580798 MGAQ8IWI9 3026 aa1.03□□□□□ -2.24
SMG8-205ENST00000580798 ATRQ13535 2644 aa1.03□□□□□ -2.24
SMG8-205ENST00000580798 TNRC18O15417 2968 aaPredicted RBP1.02□□□□□ -2.25
SMG8-205ENST00000580798 CEP250Q9BV73 2442 aa1.02□□□□□ -2.25
SMG8-205ENST00000580798 CHD8Q9HCK8 2581 aa1.02□□□□□ -2.25
SMG8-205ENST00000580798 FAM186AA6NE01 2351 aa1□□□□□ -2.25
SMG8-205ENST00000580798 HIVEP3Q5T1R4 2406 aa1□□□□□ -2.25
SMG8-205ENST00000580798 CSMD3Q7Z407 3707 aa1□□□□□ -2.25
SMG8-205ENST00000580798 MTORP42345 2549 aa0.99□□□□□ -2.25
SMG8-205ENST00000580798 CRYBG3Q68DQ2 2970 aa0.99□□□□□ -2.25
SMG8-205ENST00000580798 PIEZO1Q92508 2521 aa0.98□□□□□ -2.25
SMG8-205ENST00000580798 USP24Q9UPU5 2620 aa0.98□□□□□ -2.25
SMG8-205ENST00000580798 SMR3BP02814 79 aaPredicted RBP0.97□□□□□ -2.25
SMG8-205ENST00000580798 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
SMG8-205ENST00000580798 KRTAP19-3Q7Z4W3 81 aa0.97□□□□□ -2.25
SMG8-205ENST00000580798 PTPN13Q12923 2485 aa0.96□□□□□ -2.26
SMG8-205ENST00000580798 BDP1A6H8Y1 2624 aa0.96□□□□□ -2.26
SMG8-205ENST00000580798 CACNA1AO00555 2505 aa0.95□□□□□ -2.26
SMG8-205ENST00000580798 LRRK2Q5S007 2527 aa0.95□□□□□ -2.26
SMG8-205ENST00000580798 RIF1Q5UIP0 2472 aaKnown RBP0.95□□□□□ -2.26
SMG8-205ENST00000580798 VPS13DQ5THJ4 4388 aa0.95□□□□□ -2.26
SMG8-205ENST00000580798 DEFB4AO15263 64 aa0.95□□□□□ -2.26
SMG8-205ENST00000580798 MT1AP04731 61 aa0.95□□□□□ -2.26
SMG8-205ENST00000580798 WDR87Q6ZQQ6 2873 aa0.94□□□□□ -2.26
SMG8-205ENST00000580798 NCOR2Q9Y618 2525 aa0.94□□□□□ -2.26
SMG8-205ENST00000580798 EPG5Q9HCE0 2579 aa0.94□□□□□ -2.26
SMG8-205ENST00000580798 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
SMG8-205ENST00000580798 SPRR2DP22532 72 aa0.93□□□□□ -2.26
SMG8-205ENST00000580798 SPRR2BP35325 72 aa0.93□□□□□ -2.26
SMG8-205ENST00000580798 FBN2P35556 2912 aa0.93□□□□□ -2.26
SMG8-205ENST00000580798 STAB1Q9NY15 2570 aa0.93□□□□□ -2.26
SMG8-205ENST00000580798 ACANP16112 2415 aa0.93□□□□□ -2.26
SMG8-205ENST00000580798 NF1P21359 2839 aa0.92□□□□□ -2.26
SMG8-205ENST00000580798 MYCBP2O75592 4640 aa0.92□□□□□ -2.26
SMG8-205ENST00000580798 FLNCQ14315 2725 aa0.91□□□□□ -2.26
SMG8-205ENST00000580798 USP9YO00507 2555 aaPredicted RBP0.91□□□□□ -2.26
SMG8-205ENST00000580798 ITPR3Q14573 2671 aa0.91□□□□□ -2.26
SMG8-205ENST00000580798 GCN1Q92616 2671 aaKnown RBP0.91□□□□□ -2.26
SMG8-205ENST00000580798 SONP18583 2426 aaKnown RBP0.91□□□□□ -2.26
SMG8-205ENST00000580798 HELZ2Q9BYK8 2649 aaKnown RBP0.91□□□□□ -2.26
SMG8-205ENST00000580798 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
SMG8-205ENST00000580798 ANKHD1Q8IWZ3 2542 aaKnown RBP0.9□□□□□ -2.26
SMG8-205ENST00000580798 COL7A1Q02388 2944 aa0.9□□□□□ -2.26
SMG8-205ENST00000580798 ZFHX4Q86UP3 3567 aa0.9□□□□□ -2.27
SMG8-205ENST00000580798 DNAH11Q96DT5 4516 aa0.9□□□□□ -2.27
SMG8-205ENST00000580798 TNXBP22105 4242 aa0.89□□□□□ -2.27
SMG8-205ENST00000580798 SPRR2AP35326 72 aa0.89□□□□□ -2.27
SMG8-205ENST00000580798 FRYQ5TBA9 3013 aa0.89□□□□□ -2.27
SMG8-205ENST00000580798 SETXQ7Z333 2677 aaKnown RBP0.88□□□□□ -2.27
SMG8-205ENST00000580798 ACACBO00763 2458 aa0.88□□□□□ -2.27
SMG8-205ENST00000580798 APCP25054 2843 aa0.88□□□□□ -2.27
SMG8-205ENST00000580798 KRTAP19-5Q3LI72 72 aa0.88□□□□□ -2.27
SMG8-205ENST00000580798 NSD1Q96L73 2696 aaPredicted RBP0.88□□□□□ -2.27
SMG8-205ENST00000580798 PDZD2O15018 2839 aa0.87□□□□□ -2.27
SMG8-205ENST00000580798 DCHS2Q6V1P9 2916 aa0.86□□□□□ -2.27
SMG8-205ENST00000580798 SACSQ9NZJ4 4579 aa0.86□□□□□ -2.27
SMG8-205ENST00000580798 COL12A1Q99715 3063 aa0.86□□□□□ -2.27
SMG8-205ENST00000580798 FRYLO94915 3013 aa0.85□□□□□ -2.27
SMG8-205ENST00000580798 UTP20O75691 2785 aaKnown RBP0.85□□□□□ -2.27
SMG8-205ENST00000580798 LYSTQ99698 3801 aa0.85□□□□□ -2.27
SMG8-205ENST00000580798 BSNQ9UPA5 3926 aa0.84□□□□□ -2.27
SMG8-205ENST00000580798 KMT2AQ03164 3969 aa0.84□□□□□ -2.27
SMG8-205ENST00000580798 KRTAP6-2Q3LI66 62 aa0.84□□□□□ -2.27
SMG8-205ENST00000580798 CELSR3Q9NYQ7 3312 aa0.84□□□□□ -2.27
SMG8-205ENST00000580798 SPG11Q96JI7 2443 aa0.84□□□□□ -2.28
SMG8-205ENST00000580798 COL6A3P12111 3177 aa0.84□□□□□ -2.28
SMG8-205ENST00000580798 CFAP54Q96N23 3096 aa0.83□□□□□ -2.28
SMG8-205ENST00000580798 ITPR1Q14643 2758 aa0.82□□□□□ -2.28
SMG8-205ENST00000580798 NOTCH1P46531 2555 aa0.82□□□□□ -2.28
SMG8-205ENST00000580798 NBPF19A0A087WUL8 3843 aa0.82□□□□□ -2.28
SMG8-205ENST00000580798 SPRR2FQ96RM1 72 aa0.82□□□□□ -2.28
SMG8-205ENST00000580798 RANBP2P49792 3224 aaKnown RBP0.82□□□□□ -2.28
SMG8-205ENST00000580798 NIPBLQ6KC79 2804 aaeCLIP0.81□□□□□ -2.28
SMG8-205ENST00000580798 AKAP9Q99996 3911 aa0.81□□□□□ -2.28
SMG8-205ENST00000580798 DMXL1Q9Y485 3027 aa0.81□□□□□ -2.28
SMG8-205ENST00000580798 VPS13BQ7Z7G8 4022 aa0.81□□□□□ -2.28
SMG8-205ENST00000580798 UNC79Q9P2D8 2635 aa0.81□□□□□ -2.28
SMG8-205ENST00000580798 ANKRD11Q6UB99 2663 aaPredicted RBP0.81□□□□□ -2.28
SMG8-205ENST00000580798 PKD1L1Q8TDX9 2849 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms