RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 AEBP2Q6ZN18 517 aaPredicted RBP26.68■■□□□ 1.86
SMG8-205ENST00000580798 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
SMG8-205ENST00000580798 SENP3Q9H4L4 574 aaPredicted RBP22.75■■□□□ 1.23
SMG8-205ENST00000580798 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
SMG8-205ENST00000580798 FOXD1Q16676 465 aa21.26■□□□□ 0.99
SMG8-205ENST00000580798 MSH5O43196 834 aa19.96■□□□□ 0.79
SMG8-205ENST00000580798 POTEDQ86YR6 584 aa19.93■□□□□ 0.78
SMG8-205ENST00000580798 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
SMG8-205ENST00000580798 PIAS4Q8N2W9 510 aaPredicted RBP19.8■□□□□ 0.76
SMG8-205ENST00000580798 PPP6R1Q9UPN7 881 aa19.72■□□□□ 0.75
SMG8-205ENST00000580798 ADRA2BP18089 450 aa19.63■□□□□ 0.73
SMG8-205ENST00000580798 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
SMG8-205ENST00000580798 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
SMG8-205ENST00000580798 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
SMG8-205ENST00000580798 PPP4R3CPQ6ZMV5 832 aa17.43■□□□□ 0.38
SMG8-205ENST00000580798 DCAF8L1A6NGE4 600 aa17.29■□□□□ 0.36
SMG8-205ENST00000580798 CACNB1Q02641 598 aaPredicted RBP17.29■□□□□ 0.36
SMG8-205ENST00000580798 HOXD11P31277 338 aaPredicted RBP17.26■□□□□ 0.35
SMG8-205ENST00000580798 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
SMG8-205ENST00000580798 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
SMG8-205ENST00000580798 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
SMG8-205ENST00000580798 C1QBPQ07021 282 aaKnown RBP16.74■□□□□ 0.27
SMG8-205ENST00000580798 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
SMG8-205ENST00000580798 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
SMG8-205ENST00000580798 NPM3O75607 178 aaKnown RBP16.45■□□□□ 0.22
SMG8-205ENST00000580798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.22
SMG8-205ENST00000580798 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
SMG8-205ENST00000580798 SPINK5Q9NQ38 1064 aaPredicted RBP15.94■□□□□ 0.14
SMG8-205ENST00000580798 KCNA4P22459 653 aa15.93■□□□□ 0.14
SMG8-205ENST00000580798 CAPN15O75808 1086 aa15.9■□□□□ 0.14
SMG8-205ENST00000580798 DSG3P32926 999 aa15.88■□□□□ 0.13
SMG8-205ENST00000580798 SLC4A2P04920 1241 aa15.79■□□□□ 0.12
SMG8-205ENST00000580798 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
SMG8-205ENST00000580798 POTEHQ6S545 545 aa15.56■□□□□ 0.08
SMG8-205ENST00000580798 APLP2Q06481 763 aa15.54■□□□□ 0.08
SMG8-205ENST00000580798 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
SMG8-205ENST00000580798 ABCB7O75027 752 aa15.52■□□□□ 0.08
SMG8-205ENST00000580798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
SMG8-205ENST00000580798 HNRNPUL2Q1KMD3 747 aaKnown RBP15.49■□□□□ 0.07
SMG8-205ENST00000580798 SAMD1Q6SPF0 538 aaPredicted RBP15.4■□□□□ 0.06
SMG8-205ENST00000580798 MYCNP04198 464 aaPredicted RBP15.21■□□□□ 0.03
SMG8-205ENST00000580798 POLA2Q14181 598 aa15.11■□□□□ 0.01
SMG8-205ENST00000580798 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
SMG8-205ENST00000580798 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
SMG8-205ENST00000580798 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
SMG8-205ENST00000580798 CHRDL2Q6WN34 429 aa14.91□□□□□ -0.02
SMG8-205ENST00000580798 ATF5Q9Y2D1 282 aaPredicted RBP14.91□□□□□ -0.02
SMG8-205ENST00000580798 ZBTB12Q9Y330 459 aaPredicted RBP14.74□□□□□ -0.05
SMG8-205ENST00000580798 AKT1S1Q96B36 256 aa14.73□□□□□ -0.05
SMG8-205ENST00000580798 ZBTB22O15209 634 aa14.65□□□□□ -0.06
SMG8-205ENST00000580798 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
SMG8-205ENST00000580798 REM2Q8IYK8 340 aaPredicted RBP14.61□□□□□ -0.07
SMG8-205ENST00000580798 PIP4P2Q8N4L2 257 aa14.51□□□□□ -0.09
SMG8-205ENST00000580798 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
SMG8-205ENST00000580798 SP7Q8TDD2 431 aaPredicted RBP14.47□□□□□ -0.09
SMG8-205ENST00000580798 PITPNM1O00562 1244 aa14.46□□□□□ -0.09
SMG8-205ENST00000580798 FXR2P51116 673 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMG8-205ENST00000580798 HAX1O00165 279 aa14.3□□□□□ -0.12
SMG8-205ENST00000580798 SPDYE2BA6NHP3 402 aa14.29□□□□□ -0.12
SMG8-205ENST00000580798 SPDYE6P0CI01 402 aa14.29□□□□□ -0.12
SMG8-205ENST00000580798 FBLN2P98095 1184 aa14.29□□□□□ -0.12
SMG8-205ENST00000580798 SPDYE2Q495Y8 402 aa14.29□□□□□ -0.12
SMG8-205ENST00000580798 MKRN4PQ13434 485 aaPredicted RBP14.21□□□□□ -0.13
SMG8-205ENST00000580798 EVX2Q03828 476 aa14.14□□□□□ -0.15
SMG8-205ENST00000580798 CLEC11AQ9Y240 323 aa14.11□□□□□ -0.15
SMG8-205ENST00000580798 SPDYE1Q8NFV5 336 aaPredicted RBP14.1□□□□□ -0.15
SMG8-205ENST00000580798 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
SMG8-205ENST00000580798 SSUH2Q9Y2M2 353 aa14.09□□□□□ -0.15
SMG8-205ENST00000580798 PRKAR2AP13861 404 aaKnown RBP14.07□□□□□ -0.16
SMG8-205ENST00000580798 C19orf67A6NJJ6 358 aa13.93□□□□□ -0.18
SMG8-205ENST00000580798 CHADLQ6NUI6 762 aa13.89□□□□□ -0.19
SMG8-205ENST00000580798 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMG8-205ENST00000580798 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
SMG8-205ENST00000580798 GABBR2O75899 941 aa13.79□□□□□ -0.2
SMG8-205ENST00000580798 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
SMG8-205ENST00000580798 FARP1Q9Y4F1 1045 aaPredicted RBP13.63□□□□□ -0.23
SMG8-205ENST00000580798 CD44P16070 742 aaKnown RBP13.61□□□□□ -0.23
SMG8-205ENST00000580798 LHX8Q68G74 356 aa13.57□□□□□ -0.24
SMG8-205ENST00000580798 POTEIP0CG38 1075 aa13.51□□□□□ -0.25
SMG8-205ENST00000580798 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
SMG8-205ENST00000580798 CLCN6P51797 869 aa13.44□□□□□ -0.26
SMG8-205ENST00000580798 EHMT2Q96KQ7 1210 aa13.42□□□□□ -0.26
SMG8-205ENST00000580798 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
SMG8-205ENST00000580798 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
SMG8-205ENST00000580798 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
SMG8-205ENST00000580798 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
SMG8-205ENST00000580798 DCBLD2Q96PD2 775 aa13.34□□□□□ -0.27
SMG8-205ENST00000580798 GALR2O43603 387 aaPredicted RBP13.26□□□□□ -0.29
SMG8-205ENST00000580798 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
SMG8-205ENST00000580798 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
SMG8-205ENST00000580798 PHF12Q96QT6 1004 aa13.19□□□□□ -0.3
SMG8-205ENST00000580798 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMG8-205ENST00000580798 POTEB2H3BUK9 544 aa13.07□□□□□ -0.32
SMG8-205ENST00000580798 OTUD5Q96G74 571 aa13.05□□□□□ -0.32
SMG8-205ENST00000580798 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
SMG8-205ENST00000580798 PROM2Q8N271 834 aa13.03□□□□□ -0.32
SMG8-205ENST00000580798 MS4A3Q96HJ5 214 aa13□□□□□ -0.33
SMG8-205ENST00000580798 ASTLQ6HA08 431 aaPredicted RBP12.96□□□□□ -0.33
SMG8-205ENST00000580798 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
SMG8-205ENST00000580798 ATMINO43313 823 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms