RNA–Protein interactions for RNA: ENST00000580246.1

SMURF2-205, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene SMURF2, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-205ENST00000580246 VPS13DQ5THJ4 4388 aa0.87□□□□□ -2.27
SMURF2-205ENST00000580246 KMT2AQ03164 3969 aa0.87□□□□□ -2.27
SMURF2-205ENST00000580246 NOTCH1P46531 2555 aa0.87□□□□□ -2.27
SMURF2-205ENST00000580246 PDZD2O15018 2839 aa0.87□□□□□ -2.27
SMURF2-205ENST00000580246 APCP25054 2843 aa0.87□□□□□ -2.27
SMURF2-205ENST00000580246 NAV2Q8IVL1 2488 aa0.87□□□□□ -2.27
SMURF2-205ENST00000580246 M0R2T5 61 aa0.86□□□□□ -2.27
SMURF2-205ENST00000580246 HUWE1Q7Z6Z7 4374 aaKnown RBP0.86□□□□□ -2.27
SMURF2-205ENST00000580246 SETD2Q9BYW2 2564 aaPredicted RBP0.85□□□□□ -2.27
SMURF2-205ENST00000580246 M0QZ58 72 aa0.85□□□□□ -2.27
SMURF2-205ENST00000580246 DMBT1Q9UGM3 2413 aaPredicted RBP0.85□□□□□ -2.27
SMURF2-205ENST00000580246 KRTAP2-3P0C7H8 128 aa0.84□□□□□ -2.27
SMURF2-205ENST00000580246 KRTAP2-4Q9BYR9 128 aa0.84□□□□□ -2.27
SMURF2-205ENST00000580246 KRTAP2-1Q9BYU5 128 aa0.84□□□□□ -2.27
SMURF2-205ENST00000580246 COL6A5A8TX70 2615 aa0.84□□□□□ -2.28
SMURF2-205ENST00000580246 NF1P21359 2839 aa0.83□□□□□ -2.28
SMURF2-205ENST00000580246 DNAH3Q8TD57 4116 aa0.83□□□□□ -2.28
SMURF2-205ENST00000580246 CRYBG3Q68DQ2 2970 aa0.83□□□□□ -2.28
SMURF2-205ENST00000580246 K7EIM0 57 aa0.83□□□□□ -2.28
SMURF2-205ENST00000580246 NBPF19A0A087WUL8 3843 aa0.82□□□□□ -2.28
SMURF2-205ENST00000580246 GCN1Q92616 2671 aaKnown RBP0.82□□□□□ -2.28
SMURF2-205ENST00000580246 ACACAQ13085 2346 aa0.82□□□□□ -2.28
SMURF2-205ENST00000580246 UNC79Q9P2D8 2635 aa0.82□□□□□ -2.28
SMURF2-205ENST00000580246 SETXQ7Z333 2677 aaKnown RBP0.82□□□□□ -2.28
SMURF2-205ENST00000580246 TENM2Q9NT68 2774 aa0.81□□□□□ -2.28
SMURF2-205ENST00000580246 PKD1L1Q8TDX9 2849 aa0.81□□□□□ -2.28
SMURF2-205ENST00000580246 KRTAP19-3Q7Z4W3 81 aa0.81□□□□□ -2.28
SMURF2-205ENST00000580246 TMEM167AQ8TBQ9 72 aa0.81□□□□□ -2.28
SMURF2-205ENST00000580246 HIVEP3Q5T1R4 2406 aa0.81□□□□□ -2.28
SMURF2-205ENST00000580246 FLNCQ14315 2725 aa0.81□□□□□ -2.28
SMURF2-205ENST00000580246 USP24Q9UPU5 2620 aa0.81□□□□□ -2.28
SMURF2-205ENST00000580246 PKD1P98161 4303 aa0.8□□□□□ -2.28
SMURF2-205ENST00000580246 ZFYVE26Q68DK2 2539 aa0.8□□□□□ -2.28
SMURF2-205ENST00000580246 EPG5Q9HCE0 2579 aa0.8□□□□□ -2.28
SMURF2-205ENST00000580246 DYNC2H1Q8NCM8 4307 aaKnown RBP0.8□□□□□ -2.28
SMURF2-205ENST00000580246 PKHD1L1Q86WI1 4243 aa0.8□□□□□ -2.28
SMURF2-205ENST00000580246 RIF1Q5UIP0 2472 aaKnown RBP0.8□□□□□ -2.28
SMURF2-205ENST00000580246 CCDC168Q8NDH2 2452 aa0.8□□□□□ -2.28
SMURF2-205ENST00000580246 DNAH2Q9P225 4427 aa0.8□□□□□ -2.28
SMURF2-205ENST00000580246 HECTD4Q9Y4D8 3996 aa0.8□□□□□ -2.28
SMURF2-205ENST00000580246 SPENQ96T58 3664 aaKnown RBP0.79□□□□□ -2.28
SMURF2-205ENST00000580246 PTPN13Q12923 2485 aa0.79□□□□□ -2.28
SMURF2-205ENST00000580246 DNAH8Q96JB1 4490 aa0.79□□□□□ -2.28
SMURF2-205ENST00000580246 PRM1P04553 51 aa0.79□□□□□ -2.28
SMURF2-205ENST00000580246 U3KQA8 63 aa0.79□□□□□ -2.28
SMURF2-205ENST00000580246 ZZEF1O43149 2961 aa0.79□□□□□ -2.28
SMURF2-205ENST00000580246 TENM3Q9P273 2699 aa0.79□□□□□ -2.28
SMURF2-205ENST00000580246 DNAH7Q8WXX0 4024 aa0.79□□□□□ -2.28
SMURF2-205ENST00000580246 ANK3Q12955 4377 aaKnown RBP0.78□□□□□ -2.28
SMURF2-205ENST00000580246 USP9YO00507 2555 aaPredicted RBP0.77□□□□□ -2.29
SMURF2-205ENST00000580246 SPTBN4Q9H254 2564 aa0.77□□□□□ -2.29
SMURF2-205ENST00000580246 C9orf92A6NGG3 77 aa0.77□□□□□ -2.29
SMURF2-205ENST00000580246 TNP1P09430 55 aa0.77□□□□□ -2.29
SMURF2-205ENST00000580246 TACC2O95359 2948 aa0.77□□□□□ -2.29
SMURF2-205ENST00000580246 DCHS2Q6V1P9 2916 aa0.77□□□□□ -2.29
SMURF2-205ENST00000580246 MGAQ8IWI9 3026 aa0.77□□□□□ -2.29
SMURF2-205ENST00000580246 DNAH9Q9NYC9 4486 aa0.76□□□□□ -2.29
SMURF2-205ENST00000580246 H3BNG1 76 aa0.76□□□□□ -2.29
SMURF2-205ENST00000580246 RPL39P5Q59GN2 51 aa0.76□□□□□ -2.29
SMURF2-205ENST00000580246 DMXL1Q9Y485 3027 aa0.75□□□□□ -2.29
SMURF2-205ENST00000580246 ZFHX4Q86UP3 3567 aa0.75□□□□□ -2.29
SMURF2-205ENST00000580246 LRRK2Q5S007 2527 aa0.75□□□□□ -2.29
SMURF2-205ENST00000580246 ACANP16112 2415 aa0.75□□□□□ -2.29
SMURF2-205ENST00000580246 FRYQ5TBA9 3013 aa0.75□□□□□ -2.29
SMURF2-205ENST00000580246 UTP20O75691 2785 aaKnown RBP0.75□□□□□ -2.29
SMURF2-205ENST00000580246 HSPG2P98160 4391 aa0.75□□□□□ -2.29
SMURF2-205ENST00000580246 APC2O95996 2303 aa0.75□□□□□ -2.29
SMURF2-205ENST00000580246 NBEAL2Q6ZNJ1 2754 aa0.74□□□□□ -2.29
SMURF2-205ENST00000580246 COL12A1Q99715 3063 aa0.74□□□□□ -2.29
SMURF2-205ENST00000580246 FAM186AA6NE01 2351 aa0.74□□□□□ -2.29
SMURF2-205ENST00000580246 NSD1Q96L73 2696 aaPredicted RBP0.74□□□□□ -2.29
SMURF2-205ENST00000580246 MTORP42345 2549 aa0.74□□□□□ -2.29
SMURF2-205ENST00000580246 DNAH6Q9C0G6 4158 aa0.74□□□□□ -2.29
SMURF2-205ENST00000580246 CUBNO60494 3623 aa0.74□□□□□ -2.29
SMURF2-205ENST00000580246 ITPR3Q14573 2671 aa0.73□□□□□ -2.29
SMURF2-205ENST00000580246 FLNBO75369 2602 aaKnown RBP0.73□□□□□ -2.29
SMURF2-205ENST00000580246 STAB1Q9NY15 2570 aa0.73□□□□□ -2.29
SMURF2-205ENST00000580246 APOBP04114 4563 aaKnown RBP0.72□□□□□ -2.29
SMURF2-205ENST00000580246 DEFB108AA8MXU0 73 aa0.72□□□□□ -2.29
SMURF2-205ENST00000580246 LPAP08519 4548 aa0.72□□□□□ -2.29
SMURF2-205ENST00000580246 ANKHD1Q8IWZ3 2542 aaKnown RBP0.72□□□□□ -2.29
SMURF2-205ENST00000580246 HIVEP1P15822 2718 aa0.72□□□□□ -2.29
SMURF2-205ENST00000580246 AKAP9Q99996 3911 aa0.71□□□□□ -2.3
SMURF2-205ENST00000580246 ANKRD11Q6UB99 2663 aaPredicted RBP0.71□□□□□ -2.3
SMURF2-205ENST00000580246 SPART-AS1P0CW21 52 aa0.71□□□□□ -2.3
SMURF2-205ENST00000580246 SPTBN5Q9NRC6 3674 aaKnown RBP0.71□□□□□ -2.3
SMURF2-205ENST00000580246 FLGP20930 4061 aaPredicted RBP0.7□□□□□ -2.3
SMURF2-205ENST00000580246 DEFB110Q30KQ9 67 aa0.7□□□□□ -2.3
SMURF2-205ENST00000580246 CEP250Q9BV73 2442 aa0.7□□□□□ -2.3
SMURF2-205ENST00000580246 KALRNO60229 2985 aa0.7□□□□□ -2.3
SMURF2-205ENST00000580246 FAT3Q8TDW7 4589 aa0.7□□□□□ -2.3
SMURF2-205ENST00000580246 LRP1Q07954 4544 aaKnown RBP0.7□□□□□ -2.3
SMURF2-205ENST00000580246 RANBP2P49792 3224 aaKnown RBP0.7□□□□□ -2.3
SMURF2-205ENST00000580246 LAMA5O15230 3695 aa0.69□□□□□ -2.3
SMURF2-205ENST00000580246 SYNE1Q8NF91 8797 aaKnown RBP0.69□□□□□ -2.3
SMURF2-205ENST00000580246 NBEAQ8NFP9 2946 aa0.69□□□□□ -2.3
SMURF2-205ENST00000580246 NCOR2Q9Y618 2525 aa0.69□□□□□ -2.3
SMURF2-205ENST00000580246 SPG11Q96JI7 2443 aa0.68□□□□□ -2.3
SMURF2-205ENST00000580246 CACNA1AO00555 2505 aa0.68□□□□□ -2.3
SMURF2-205ENST00000580246 DNAH1Q9P2D7 4330 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms