RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.51
MSI2-209ENST00000579483 KRTAP1-4P0C5Y4 121 aa5.64□□□□□ -1.51
MSI2-209ENST00000579483 ASH1LQ9NR48 2969 aaKnown RBP5.63□□□□□ -1.51
MSI2-209ENST00000579483 COL6A3P12111 3177 aa5.63□□□□□ -1.51
MSI2-209ENST00000579483 SZT2Q5T011 3432 aa5.63□□□□□ -1.51
MSI2-209ENST00000579483 ADGRG4Q8IZF6 3080 aa5.62□□□□□ -1.51
MSI2-209ENST00000579483 CELSR2Q9HCU4 2923 aa5.61□□□□□ -1.51
MSI2-209ENST00000579483 A0A1B0GVY2 172 aa5.61□□□□□ -1.51
MSI2-209ENST00000579483 DCHS2Q6V1P9 2916 aa5.6□□□□□ -1.51
MSI2-209ENST00000579483 ZANQ9Y493 2812 aa5.59□□□□□ -1.51
MSI2-209ENST00000579483 XP32Q5T750 250 aa5.59□□□□□ -1.51
MSI2-209ENST00000579483 NF1P21359 2839 aa5.57□□□□□ -1.52
MSI2-209ENST00000579483 BOD1L1Q8NFC6 3051 aa5.56□□□□□ -1.52
MSI2-209ENST00000579483 ROMO1P60602 79 aa5.56□□□□□ -1.52
MSI2-209ENST00000579483 MXRA5Q9NR99 2828 aa5.55□□□□□ -1.52
MSI2-209ENST00000579483 TENM3Q9P273 2699 aa5.55□□□□□ -1.52
MSI2-209ENST00000579483 DMXL1Q9Y485 3027 aa5.55□□□□□ -1.52
MSI2-209ENST00000579483 TENM1Q9UKZ4 2725 aa5.54□□□□□ -1.52
MSI2-209ENST00000579483 USP34Q70CQ2 3546 aa5.53□□□□□ -1.52
MSI2-209ENST00000579483 TENM2Q9NT68 2774 aa5.52□□□□□ -1.53
MSI2-209ENST00000579483 Q5VV11 94 aa5.51□□□□□ -1.53
MSI2-209ENST00000579483 KRTAP10-8P60410 259 aa5.49□□□□□ -1.53
MSI2-209ENST00000579483 HRNRQ86YZ3 2850 aaPredicted RBP5.48□□□□□ -1.53
MSI2-209ENST00000579483 SPATA8Q6RVD6 105 aa5.47□□□□□ -1.53
MSI2-209ENST00000579483 KRTAP13-3Q3SY46 172 aa5.47□□□□□ -1.53
MSI2-209ENST00000579483 CELSR3Q9NYQ7 3312 aa5.44□□□□□ -1.54
MSI2-209ENST00000579483 CYSTM1Q9H1C7 97 aa5.43□□□□□ -1.54
MSI2-209ENST00000579483 FREM2Q5SZK8 3169 aa5.43□□□□□ -1.54
MSI2-209ENST00000579483 VCANP13611 3396 aa5.42□□□□□ -1.54
MSI2-209ENST00000579483 TNP1P09430 55 aa5.41□□□□□ -1.54
MSI2-209ENST00000579483 PDZD2O15018 2839 aa5.39□□□□□ -1.55
MSI2-209ENST00000579483 KRTAP10-10P60014 251 aa5.39□□□□□ -1.55
MSI2-209ENST00000579483 PRO2289Q9P1D8 64 aa5.37□□□□□ -1.55
MSI2-209ENST00000579483 FBN2P35556 2912 aa5.34□□□□□ -1.56
MSI2-209ENST00000579483 PKD1L1Q8TDX9 2849 aa5.31□□□□□ -1.56
MSI2-209ENST00000579483 KRTAP16-1A8MUX0 517 aa5.3□□□□□ -1.56
MSI2-209ENST00000579483 CELSR1Q9NYQ6 3014 aa5.28□□□□□ -1.56
MSI2-209ENST00000579483 SPTBN5Q9NRC6 3674 aaKnown RBP5.28□□□□□ -1.56
MSI2-209ENST00000579483 OTOGQ6ZRI0 2925 aa5.28□□□□□ -1.56
MSI2-209ENST00000579483 CFAP47Q6ZTR5 3102 aa5.27□□□□□ -1.57
MSI2-209ENST00000579483 A0A0A0MQY5 61 aa5.27□□□□□ -1.57
MSI2-209ENST00000579483 A8MU10 97 aa5.27□□□□□ -1.57
MSI2-209ENST00000579483 PRAC1Q96KF2 57 aa5.26□□□□□ -1.57
MSI2-209ENST00000579483 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
MSI2-209ENST00000579483 DNAH14Q0VDD8 3507 aa5.22□□□□□ -1.57
MSI2-209ENST00000579483 SPEGQ15772 3267 aa5.21□□□□□ -1.58
MSI2-209ENST00000579483 TGP01266 2768 aa5.21□□□□□ -1.58
MSI2-209ENST00000579483 MYO15AQ9UKN7 3530 aa5.2□□□□□ -1.58
MSI2-209ENST00000579483 LOC400499M0QZD8 3231 aa5.16□□□□□ -1.58
MSI2-209ENST00000579483 VWFP04275 2813 aa5.14□□□□□ -1.59
MSI2-209ENST00000579483 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
MSI2-209ENST00000579483 DCHS1Q96JQ0 3298 aa5.11□□□□□ -1.59
MSI2-209ENST00000579483 ZFHX3Q15911 3703 aa5.09□□□□□ -1.59
MSI2-209ENST00000579483 H0YAA0 97 aa5.05□□□□□ -1.6
MSI2-209ENST00000579483 FBN1P35555 2871 aaKnown RBP5.04□□□□□ -1.6
MSI2-209ENST00000579483 FBN3Q75N90 2809 aa5.04□□□□□ -1.6
MSI2-209ENST00000579483 WDFY3Q8IZQ1 3526 aa5.04□□□□□ -1.6
MSI2-209ENST00000579483 MT1HL1P0DM35 61 aa5.04□□□□□ -1.6
MSI2-209ENST00000579483 A6NN06 94 aa5.02□□□□□ -1.61
MSI2-209ENST00000579483 P0C880 135 aa5.01□□□□□ -1.61
MSI2-209ENST00000579483 ALMS1Q8TCU4 4167 aa5.01□□□□□ -1.61
MSI2-209ENST00000579483 NBPF19A0A087WUL8 3843 aa4.98□□□□□ -1.61
MSI2-209ENST00000579483 ANK3Q12955 4377 aaKnown RBP4.97□□□□□ -1.61
MSI2-209ENST00000579483 C10orf95Q9H7T3 257 aa4.96□□□□□ -1.61
MSI2-209ENST00000579483 RELNP78509 3460 aa4.95□□□□□ -1.62
MSI2-209ENST00000579483 SRRM2Q9UQ35 2752 aaKnown RBP4.93□□□□□ -1.62
MSI2-209ENST00000579483 MUC3AQ02505 3323 aa4.92□□□□□ -1.62
MSI2-209ENST00000579483 KRTAP10-4P60372 401 aaPredicted RBP4.88□□□□□ -1.63
MSI2-209ENST00000579483 KRTAP4-5Q9BYR2 181 aa4.87□□□□□ -1.63
MSI2-209ENST00000579483 DMDP11532 3685 aa4.86□□□□□ -1.63
MSI2-209ENST00000579483 MEGF8Q7Z7M0 2845 aa4.8□□□□□ -1.64
MSI2-209ENST00000579483 KRTAP13-4Q3LI77 160 aa4.8□□□□□ -1.64
MSI2-209ENST00000579483 ASPMQ8IZT6 3477 aa4.79□□□□□ -1.64
MSI2-209ENST00000579483 HUWE1Q7Z6Z7 4374 aaKnown RBP4.78□□□□□ -1.64
MSI2-209ENST00000579483 KRTAP3-1Q9BYR8 98 aa4.77□□□□□ -1.65
MSI2-209ENST00000579483 LAMA5O15230 3695 aa4.73□□□□□ -1.65
MSI2-209ENST00000579483 KRTAP12-2P59991 146 aa4.71□□□□□ -1.65
MSI2-209ENST00000579483 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
MSI2-209ENST00000579483 COL7A1Q02388 2944 aa4.71□□□□□ -1.66
MSI2-209ENST00000579483 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
MSI2-209ENST00000579483 H3BS24 57 aa4.69□□□□□ -1.66
MSI2-209ENST00000579483 DNAH6Q9C0G6 4158 aa4.68□□□□□ -1.66
MSI2-209ENST00000579483 ZFHX4Q86UP3 3567 aa4.67□□□□□ -1.66
MSI2-209ENST00000579483 TRRAPQ9Y4A5 3859 aa4.63□□□□□ -1.67
MSI2-209ENST00000579483 KRTAP10-6P60371 365 aaPredicted RBP4.61□□□□□ -1.67
MSI2-209ENST00000579483 DNAH1Q9P2D7 4330 aa4.6□□□□□ -1.67
MSI2-209ENST00000579483 SMG1Q96Q15 3661 aaKnown RBP4.59□□□□□ -1.67
MSI2-209ENST00000579483 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
MSI2-209ENST00000579483 CSMD1Q96PZ7 3565 aa4.56□□□□□ -1.68
MSI2-209ENST00000579483 CSMD2Q7Z408 3487 aa4.56□□□□□ -1.68
MSI2-209ENST00000579483 DNAH10Q8IVF4 4471 aa4.55□□□□□ -1.68
MSI2-209ENST00000579483 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
MSI2-209ENST00000579483 SPENQ96T58 3664 aaKnown RBP4.54□□□□□ -1.68
MSI2-209ENST00000579483 DNAH3Q8TD57 4116 aa4.53□□□□□ -1.68
MSI2-209ENST00000579483 ANK2Q01484 3957 aa4.51□□□□□ -1.69
MSI2-209ENST00000579483 DNAH11Q96DT5 4516 aa4.5□□□□□ -1.69
MSI2-209ENST00000579483 DNAH9Q9NYC9 4486 aa4.5□□□□□ -1.69
MSI2-209ENST00000579483 KRTAP3-3Q9BYR6 98 aa4.5□□□□□ -1.69
MSI2-209ENST00000579483 DYNC2H1Q8NCM8 4307 aaKnown RBP4.5□□□□□ -1.69
MSI2-209ENST00000579483 AKAP9Q99996 3911 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms